ID M14913; SV 1; linear; genomic RNA; STD; VRL; 3543 BP. XX AC M14913; XX DT 16-JUL-1988 (Rel. 16, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Red clover mottle virus (RCMV) middle component (M) gene, complete cds. XX KW middle component. XX OS Red clover mottle virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-3543 RX PUBMED; 18640659. RA Shanks M., Stanley J., Lomonossoff G.P.; RT "The primary structure of red clover mottle virus middle component RNA"; RL Virology 155(2):697-706(1986). XX DR MD5; 0f1757008c2f8c2ac6d14da1d60ada2a. XX FH Key Location/Qualifiers FH FT source 1..3543 FT /organism="Red clover mottle virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:12262" FT mRNA <1..3543 FT /note="middle component mRNA" FT CDS 291..3281 FT /codon_start=1 FT /note="middle component protein" FT /db_xref="GOA:P13561" FT /db_xref="InterPro:IPR003181" FT /db_xref="InterPro:IPR003182" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/Swiss-Prot:P13561" FT /protein_id="AAA47230.1" FT /translation="MLGISNLCRYYQGQRRVCANKFYQKYVNHSDLYFFDLWEISANNL FT WIKLAFVLLLCLFEIISGLEYLGKMAQEILKQGIPANVLQEKANLFKKASANNKIKDEM FT PNALSLYQNHSFFQKLKHLADKKNLDITSLPGGREVEYKHLDAGHLLADTNVVIDVPLV FT PQLAARTPTDYNFGTSRDKSATALHVGAIEVVIQSYASSECDLMAGMMLVDTFHSRPEN FT AIRSVYIVPIRGGMFMRALCFPNTLVPMDSDINNRFKVVFSLPNNDFPQGSKLGHVSIN FT MAGCTTSLSKTYVPSPLLTEELGREAATVIQYLGRDTYAMQTSNVPTSDEISRMVFNFH FT MEGKLSMHKTGSLSSILSKSKSLRYTIGGSKPKNKLADKAHNEEAETSDSKGIIDPKDG FT NVFANPQTDTDLFKLSLDDTSSPKGSLLDTRFAQKKVLIPKAMAGGADLLSSNLYDVLS FT GSSFRASLALARTHVVEGKIRCICTINLPENTGCCLAITVNSSNRGQFSTDIYTTGSQD FT RILWNPACSKNCDFSFNPNPCGTAWSLEFLRRTKFHLSVTCVSGWSAQPQTDIAMTMDW FT YVSNKPCVPCIYNVGTPGQNVWVNRWMGKLSFPQGSQNQLKQMPLAIGGGAGAKNSILM FT NMTNAFLSLWRYFHGDLVFEVQKMSSPFIKSTVTFFIGFGGLPFSENLEDFPNKLIQFG FT EVQERVEITFTRKEFLTAWSTQVDPAGPVAGDGCPYLCAMVHDSTASTITGDFNLGVTL FT LRIENFVGIGRNPGIQGARLLGSMQAEAQGGVVRTTDGVYSTCFRVRTPLALKDSGSFT FT CDLIGGGITTDSNTGWNLTALNTPVANLLRTAAWKRGTIHVQVAMFGSTVKRSDWTSTV FT QLFLRQSMNTSSYDARVWVISKPGAAILEFSFDVEGPNNGFEMWEANWASQTSWFLEFL FT ISNVTQNTLFEVSMKLDSNFCVAGTTLMPPFSVTASPDSRPLLGVKTSTPAKKYVGGSL FT QAGPSPD" XX SQ Sequence 3543 BP; 1010 A; 667 C; 783 G; 1083 T; 0 other; tattaaaatt tttatataaa attttgataa ccgcaaacgt ggggaaaccc gaaacctttc 60 ttttcttttc tttcaaagcg aacgagtatt ccagctttca agcgaaccac ttttcgttga 120 caccttactt ttagtaatcg tgttgattta ttgaagaata gcgtgtggag cgatccttgg 180 tgttaattca ccttgaggag cacgttatat cttttcttcc cttctttctc ttggattaca 240 aatacgcaag cattcaattg tcagcaccct tcatagctct attaatatat atgttgggaa 300 ttagcaattt gtgcagatac taccaaggtc aaagacgagt gtgtgccaat aagttttacc 360 agaagtatgt taaccactca gatttgtact ttttcgatct ctgggaaatt tcggctaaca 420 atctttggat taagttagct tttgtactgt tactttgtct ctttgaaata atttctgggc 480 tagaatatct tgggaaaatg gcacaagaaa ttttgaaaca aggtattcca gcaaatgtgc 540 tacaagaaaa agccaacctt ttcaagaagg ctagtgcaaa caataagatt aaggatgaaa 600 tgccaaatgc actgtctctt taccaaaacc actccttctt ccagaaactc aaacatctag 660 cagacaagaa gaatttggat atcactagtt tacctggagg tagggaagtg gaatacaaac 720 atcttgatgc aggccattta ttggcggata caaatgtggt tatagatgtt ccacttgttc 780 cacaacttgc cgctaggaca ccaactgatt acaattttgg aactagcaga gacaagagtg 840 ccactgcttt gcatgtcgga gcaatagagg ttgtaattca gagttatgcc tcttctgagt 900 gtgatttaat ggcaggcatg atgctggttg acactttcca ctcgcgccca gagaatgcca 960 tcagatcagt atacatagtg ccaattcgag ggggtatgtt tatgcgagct ctatgttttc 1020 ctaacacatt ggttcctatg gactctgata taaataatag gttcaaggtg gttttctctc 1080 taccaaacaa tgactttccc cagggtagta aacttggaca tgtttccata aatatggctg 1140 ggtgcactac tagcttgagc aaaacatatg ttccctctcc tctactcaca gaagagttgg 1200 gcagagaagc tgccacagtg attcagtatc ttggaagaga tacgtatgcg atgcagacca 1260 gtaatgtgcc aaccagtgat gaaattagtc gaatggtctt caactttcac atggaaggca 1320 agttgtctat gcataaaaca ggctctctat cctctatact gagtaagagt aaaagtttga 1380 ggtacactat tggagggagc aagcccaaaa ataaactagc tgacaaagct cataatgagg 1440 aagctgaaac ctctgatagt aaagggatta ttgatcctaa ggacggtaat gtatttgcaa 1500 atccccagac tgacactgat ttgttcaaat taagtttgga tgatacgtcg agtcccaaag 1560 gatcactatt agacacaaga tttgcccaaa agaaagtttt gattccaaaa gcaatggcag 1620 ggggggcaga cttactgagt tcaaatcttt atgatgtgct atcgggaagt tcctttagag 1680 cctctctagc attagcaaga actcatgtgg ttgaaggaaa gatcaggtgt atttgcacca 1740 taaacttacc tgagaatact gggtgctgtc tggcaatcac agttaatagc agcaatagag 1800 ggcagtttag tacagatata tatacaacag gttctcagga cagaatttta tggaatcctg 1860 cttgttccaa aaattgtgat ttctccttta atccaaatcc ttgtgggact gcatggagct 1920 tggaattctt gcgtcgcact aagtttcact tgagtgtcac atgtgtgtcg gggtggtcag 1980 cccaaccgca gacagacatt gccatgacaa tggattggta tgtgagtaat aagccatgtg 2040 tgccatgtat ttacaatgtt ggaacgcctg gacaaaatgt ttgggttaat agatggatgg 2100 gtaaactgtc tttccctcaa ggatctcaaa atcaacttaa acagatgccc ttggccatag 2160 gtggcggtgc tggagcaaaa aatagtattc ttatgaatat gaccaatgct tttctgagtc 2220 tctggcgcta ctttcacggt gatctagttt ttgaggtaca gaaaatgagt tctcctttta 2280 taaagtcaac tgtgactttc ttcataggtt ttgggggtct tccttttagt gaaaacttgg 2340 aagattttcc aaataagctg attcaatttg gagaagtgca agaaagagtg gagataacat 2400 ttactaggaa ggaattcctg acggcgtggt ctacccaagt tgacccagct ggacctgtgg 2460 ctggtgatgg ttgcccttat ttgtgtgcta tggtacatga ttcaacagcc agtaccataa 2520 caggagattt taacttgggt gtcaccctat tgcgcattga gaattttgtg ggcataggca 2580 gaaatcctgg aatacagggg gcccgattgc taggaagcat gcaagcggaa gcccagggtg 2640 gcgtcgtacg cactactgat ggtgtttaca gcacatgctt tagagttaga accccactag 2700 cacttaaaga ttcaggatct tttacctgcg atttgatagg agggggaata accacagatt 2760 caaatacagg atggaatctg accgcattga atactcctgt tgccaacctt ctacgcacag 2820 ctgcttggaa aagaggtact atacatgtgc aagtggcaat gtttggcagt acagtcaaaa 2880 gatcagactg gacttcaact gtgcagctgt tccttaggca atccatgaat accagtagtt 2940 atgatgctcg agtgtgggtg atttcaaaac caggagcagc aatattagaa ttttcttttg 3000 acgtggaggg tcctaacaat ggatttgaaa tgtgggaagc aaattgggcc tctcaaacta 3060 gctggttcct agagttcttg atctccaatg tgactcaaaa cacattattt gaggttagca 3120 tgaaattgga cagcaacttc tgtgtggcag gaacaactct tatgccgccc ttctctgtga 3180 cagcaagtcc tgattcgcgc ccacttctag gcgtgaaaac gtccacacct gctaagaagt 3240 atgttggtgg tagtctccaa gctggccctt caccagattg aggtctcatg ttgcatggta 3300 tagttgcata tttattttat gttcattttc tttcttgctt gagtgtgtta tttcaatagc 3360 tcctgtttag caggtcgaac cttcagcaag ttcacaaaaa gattttcctt ttgtgtgttt 3420 cttttcgtgt gatggcttac ttttgtgatt actttgtatg tttttacaaa tttgtgataa 3480 tattagcttt aaagttattt taatatagta ctattgtggt attgctttaa agttatgttt 3540 att 3543 //