ID   M14779; SV 1; linear; genomic RNA; STD; VRL; 1462 BP.
XX
AC   M14779;
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 5)
XX
DE   Reovirus (Lang strain) s1 mRNA encoding the minor capsid cell attachment
DE   protein sigma-1a and the nonstructural protein sigma-ibNS, complete cds.
XX
KW   haemagglutinin; minor capsid cell attachment protein;
KW   nonstructural protein.
XX
OS   Mammalian orthoreovirus 1 Lang
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus.
XX
RN   [1]
RP   1-1462
RX   DOI; 10.1016/0006-291X(86)90761-8.
RX   PUBMED; 2430568.
RA   Munemitsu S.M., Atwater J.A., Samuel C.E.;
RT   "Biosynthesis of reovirus-specified polypeptides. Molecular cDNA cloning
RT   and nucleotide sequence of the reovirus serotype 1 Lang strain bicistronic
RT   s1 mRNA which encodes the minor capsid polypeptide sigma 1a and the
RT   nonstructural polypeptide sigma 1bNS";
RL   Biochem. Biophys. Res. Commun. 140(2):508-514(1986).
XX
DR   MD5; 3a67804460a4a470fa1faddbe66ca371.
XX
CC   Computer-readable sequence for [1] kindly provided by C.E.Samuel,
CC   27-MAY-1987.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1462
FT                   /organism="Mammalian orthoreovirus 1 Lang"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10884"
FT   CDS             14..1270
FT                   /codon_start=1
FT                   /note="minor capsid cell attachment protein sigma-1a"
FT                   /db_xref="GOA:P04506"
FT                   /db_xref="InterPro:IPR002592"
FT                   /db_xref="InterPro:IPR008982"
FT                   /db_xref="PDB:4GU3"
FT                   /db_xref="PDB:4GU4"
FT                   /db_xref="PDB:4ODB"
FT                   /db_xref="PDB:4XC5"
FT                   /db_xref="PDB:5MHS"
FT                   /db_xref="PDB:6GAJ"
FT                   /db_xref="PDB:6GAK"
FT                   /db_xref="PDB:6GAO"
FT                   /db_xref="UniProtKB/Swiss-Prot:P04506"
FT                   /protein_id="AAA47276.1"
FT                   /translation="MDASLITEIRKIVLQLSVSSNGSQSKEIEEIKKQVQVNVDDIRAA
FT                   NIKLDGLGRQIADISNSISTIESRLGEMDNRLVGISSQVTQLSNSGSQNTQSISSLGDR
FT                   INAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAALTTRVTTEVTRLDGLINSGQN
FT                   SIGELSTRLSNVETSMVTTAGRGLQKNGNTLNVIVGNGMWFNSSNQLQLDLSGQSKGVG
FT                   FVGTGMVVKIDTNYFAYNSNGEITLVSQINELPSRVSTLESAKIDSVLPPLTVREASGV
FT                   RTLSFGYDTSDFTIINSVLSLRSRLTLPTYRYPLELDTANNRVQVADRFGMRTGTWTGQ
FT                   LQYQHPQLSWRANVTLNLMKVDDWLVLSFSQMTTNSIMADGKFLINFVSGLSSGWQTGD
FT                   TEPSSTIDPLLRHLPRSNF"
FT   CDS             75..434
FT                   /codon_start=1
FT                   /note="nonstructural protein sigma-ibNS"
FT                   /db_xref="GOA:P07938"
FT                   /db_xref="InterPro:IPR003478"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07938"
FT                   /protein_id="AAA47277.1"
FT                   /translation="MAPSQKKSRKSRNKSRSTLMISGLPILNSTDLEDRLLTSAIASQP
FT                   LSQDWVRWIIDLWVSRVRSRNYLTQVARTLRAYPHWVTESMLSNHELTVWIRSRLISLD
FT                   EHPLWRQMLEAYGQN"
XX
SQ   Sequence 1462 BP; 427 A; 292 C; 368 G; 375 T; 0 other;
     gctattcgcg cctatggatg catctctcat tacagagata cggaaaatag tactccaact        60
     atctgtatca agcaatggct cccagtcaaa agaaatcgag gaaatcaaga aacaagtcca       120
     ggtcaacgtt gatgatatca gggctgccaa tattaaactc gacggacttg gaagacagat       180
     tgctgacatc agcaatagca tctcaaccat tgagtcaaga ttgggtgaga tggataatcg       240
     acttgtgggt atctcgagtc aggtcacgca attatctaac tcaggtagcc agaacactca       300
     gagcatatcc tcattgggtg acagaatcaa tgctgtcgaa ccacgagttg acagtctgga       360
     tacggtcacg tctaatctca ctggacgaac atccactttg gaggcagatg ttggaagctt       420
     acggacagaa ctagcagcgc taacaacacg ggtgacaact gaggttacaa ggttagatgg       480
     tctaatcaat agtggccaga attcgattgg tgagctatcc acaagactat ccaatgtgga       540
     gacgtctatg gtgacgacgg ctggacgggg actgcagaaa aacggaaaca ccttgaacgt       600
     cattgtaggt aatggaatgt ggtttaatag ttctaatcaa ttgcagctcg acctttcggg       660
     gcaatcaaaa ggggtgggat ttgtcggcac aggaatggtg gttaagattg atactaatta       720
     ttttgcttac aatagtaatg gagagattac attggtgagt caaatcaatg aattgccatc       780
     gcgcgtatca acactggaat cagcgaaaat cgattcagtt ttacctccat taaccgtacg       840
     cgaagcgagc ggcgtacgta ccctgagctt tggttatgat acgagcgatt ttacaatcat       900
     caactccgta ctgtcgttac ggtcacgttt gactcttccg acatacaggt accctctgga       960
     gctcgacaca gcaaataata gagtgcaggt ggcagatcgt tttggcatgc gcacgggtac      1020
     ttggacggga caattgcaat atcagcaccc acaattgagt tggagagcaa atgtcacttt      1080
     gaatttgatg aaggtggatg attggttggt gttgagcttt tctcagatga cgactaactc      1140
     aataatggca gatgggaaat ttctgattaa ttttgtgtct gggttatctt ctggatggca      1200
     gacgggggat actgaaccat cgtcaactat tgatccattg ctacgacatt tgccgcggtc      1260
     caatttctaa ataacgatca acgcattgat gcgtttagga tcatgggagt atcggaatgg      1320
     acggatggag aattagagat taagaattat ggtggcacat acaccggtca tactcaagta      1380
     tattgggctc cgtggacgat catgtatcca tgcaatgtga ggtgaatcta gcgcgaaccc      1440
     tcggcacaag gggtcaatca tc                                               1462
//