Dbfetch

Dbfetch

ID   M13139; SV 1; linear; genomic RNA; STD; VRL; 1196 BP.
XX
AC   M13139;
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Reovirus (Lang strain) s4 mRNA encoding the major capsid surface protein
DE   sigma-3, complete cds.
XX
KW   major capsid surface protein.
XX
OS   Mammalian orthoreovirus 1 Lang
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus.
XX
RN   [1]
RP   1-1196
RX   DOI; 10.1016/0006-291X(86)90893-4.
RX   PUBMED; 3518713.
RA   Atwater J.A., Manemitsu S.M., Samuel C.E.;
RT   "Biosynthesis of reovirus-specified polypeptides. Molecular cDNA cloning
RT   and nucleotide sequence of the reovirus serotype 1 Lang strain s4 mRNA
RT   which encodes the major capsid surface polypeptide sigma 3";
RL   Biochem. Biophys. Res. Commun. 136(1):183-192(1986).
XX
DR   MD5; 8d27350b5f2be23dc3398034ee6c07bf.
XX
CC   Draft entry and computer-readable sequence for [1] kindly provided
CC   by C.E.Samuel, 27-MAY-1987.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1196
FT                   /organism="Mammalian orthoreovirus 1 Lang"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:10884"
FT   CDS             33..1130
FT                   /codon_start=1
FT                   /note="major capsid surface protein sigma-3"
FT                   /db_xref="GOA:P07939"
FT                   /db_xref="InterPro:IPR000153"
FT                   /db_xref="InterPro:IPR023634"
FT                   /db_xref="PDB:1JMU"
FT                   /db_xref="PDB:2CSE"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07939"
FT                   /protein_id="AAA47272.1"
FT                   /translation="MEVCLPNGHQIVDLINNAFEGRVSIYSAQEGWDKTISAQPDMMVC
FT                   GGAVVCMHCLGVVGSLQRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRGMLSFVA
FT                   QMHAMMNDVSPEDLDRVRTEGGSLVELNWLQVDPNSMFRSIHSSWTDPLQVVDDLDTKL
FT                   DQYWTALNLMIDSSDLVPNFMMRDPSHAFNGVRLEGDARQTQFSRTFDSRSSLEWGVMV
FT                   YDYSELEHDPSKGRAYRKELVTPARDFGHFGLSHYSRATTPILGKMPAVFSGMLTGNCK
FT                   MYPFIKGTAKLKTVRKLVDSVNHAWGVEKIRYALGPGGMTGWYDRTMQQAPIVLTPAAL
FT                   TMFSDTTKFGDLDYPVMIGDPMILG"
XX
SQ   Sequence 1196 BP; 299 A; 269 C; 317 G; 311 T; 0 other;
     gctatttttg cctcttccca aacgttgtcg caatggaggt gtgcttgccc aacggtcatc        60
     agatcgtgga cttgattaac aacgcttttg aaggtcgtgt atcaatctac agcgcgcaag       120
     agggatggga caaaacaatc tcagcacagc cagatatgat ggtatgtggt ggtgccgtcg       180
     tttgcatgca ttgtctaggt gttgttggat ctctgcaacg caagctgaag catttgcctc       240
     accatagatg taatcaacag attcgtcatc aggattacgt cgatgtacag ttcgcagatc       300
     gtgttactgc tcactggaag cggggtatgc tgtcctttgt tgcgcagatg cacgcgatga       360
     tgaatgacgt atcaccagag gatctagacc gtgtgcgtac tgagggaggt tcactagtgg       420
     agttaaactg gcttcaggtt gatccaaatt caatgtttag atcaatacac tcaagttgga       480
     cagatcctct gcaggtagtg gatgatcttg acactaagct ggatcaatac tggacggccc       540
     tgaatctgat gattgattca tccgacttgg tgcccaactt catgatgaga gacccatcac       600
     atgcattcaa tggtgtgaga ctggagggag acgcccgcca aactcaattc tctaggactt       660
     tcgattcgag atcgagttta gaatggggtg tgatggttta cgattactct gagttagagc       720
     atgatccatc gaagggccgt gcttacagga aggaattggt gacgccagca cgagacttcg       780
     gtcattttgg attatcccac tactctaggg cgactacccc aatccttgga aagatgccag       840
     ctgtattctc gggaatgttg actgggaatt gtaaaatgta tccattcatc aaaggaacgg       900
     ctaagttaaa gacagtgcgc aagctagtgg attcagtcaa tcatgcgtgg ggcgtcgaga       960
     agatcagata tgcgcttgga ccaggtggca tgacgggatg gtacgacagg actatgcagc      1020
     aggcccccat tgtactaact cccgctgctc tcacaatgtt ctcagacacc accaagttcg      1080
     gggatttgga ttatccggtg atgattggcg atccgatgat tcttggctaa acacccccat      1140
     cttcacagcg ccgggcctga ccaacctggt gtgacgtggg acaggctcca ttcatc          1196
//