ID   M11598; SV 1; linear; genomic RNA; STD; VRL; 1480 BP.
XX
AC   M11598;
XX
DT   16-JUL-1988 (Rel. 16, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Pepper mottle virus (PeMV) capsid protein RNA, complete cds.
XX
KW   .
XX
OS   Pepper mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1480
RX   PUBMED; 18640557.
RA   Dougherty W.G., Allison R.F., Parks T.D., Johnston R.E., Feild M.J.,
RA   Armstrong F.B.;
RT   "Nucleotide sequence at the 3' terminus of pepper mottle virus genomic RNA:
RT   evidence for an alternative mode of potyvirus capsid protein gene
RT   organization";
RL   Virology 146(2):282-291(1985).
XX
DR   MD5; 5d84b204a8ba647a331fb24f08abade6.
XX
CC   Additional possible start codons are located at positions 242, 287
CC   and 290.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1480
FT                   /organism="Pepper mottle virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12209"
FT   misc_RNA        <1..1480
FT                   /note="PeMV RNA"
FT   CDS             155..1147
FT                   /codon_start=1
FT                   /note="PeMV capsid protein (put.); putative"
FT                   /db_xref="GOA:P07993"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07993"
FT                   /protein_id="AAA46902.1"
FT                   /translation="MVIAATTFCINSAGRKSSLHSKHALRKLYMDRAVDEEELRVFTEM
FT                   MVALDDEFECDSYEVHHQANDTIDTGGNSKKDVKPEQGSIQPSSNKGKEKDVNAGTSGT
FT                   HTVPRIKAITAKMRMPKSKGAAVLKLDHLLEYAPQQIDISNTRATQSQFDTWYEAVRVA
FT                   YDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGSEQVEYPLKPIVENAKPTLRQI
FT                   MAHFSDVAEAYIEMRNKKEPYMPRYGLVRNLRDASLARYAFDFYEVTSRTPVRAREAHI
FT                   QMKAAALKSAQSRLFGLDGGVSTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 1480 BP; 467 A; 265 C; 364 G; 384 T; 0 other;
     tgtatgtacc aaaactcgaa gaagaaagaa ttgtgatcta ttctacaatg gacagggcag        60
     atttggccga acacagactc gaagcaattt gcgcagccat gatagaatcg tggggttact       120
     ccgaactaac acaccaaatt aggaggtttt actcatggtt attgcagcaa caaccttttg       180
     catcaatagc gcaggaagga aaagctcctt acatagcaag catgcattga ggaagctgta       240
     catggacagg gcagtggacg aagaggagct aagagtcttt actgaaatga tggttgcatt       300
     ggatgatgag tttgaatgtg attcttatga agtgcatcac caggcgaatg atacaatcga       360
     cactggaggg aatagtaaga aagatgtgaa accagaacaa ggtagcatcc agccaagttc       420
     taacaagggt aaggaaaaag atgtaaatgc tggtacatct ggaacacata ctgtgccaag       480
     aataaaggct atcacggcaa aaatgagaat gcccaaaagc aaaggagcgg ccgtgctgaa       540
     attagaccac ttgctcgagt atgcgccaca acagatagat atctcaaaca ctcgggcaac       600
     tcaatcacag tttgatacgt ggtatgaagc agtgcgggtt gcatacgaca taggggaaac       660
     tgaaatgcca actgtgatga atgggcttat ggtttggtgc attgaaaatg gaacctcgcc       720
     aaatatcaac ggagtttggg ttatgatgga tggaagtgaa caagtcgagt atccattgaa       780
     accaattgtt gagaatgcaa aaccaaccct taggcaaatc atggcacatt tctcagatgt       840
     tgcagaagcg tatatagaaa tgcgcaacaa aaaggaacca tatatgccac gatatggttt       900
     agttcgaaat ctgcgggatg caagtctagc gcgctatgcc tttgactttt atgaagtcac       960
     atcacggaca ccagtgaggg ctagagaagc gcacatacaa atgaaggccg cagcattgaa      1020
     atcagcccaa tctcgacttt tcgggttgga cggtggcgtc agtacacaag aggagaacac      1080
     agagaggcac accaccgagg atgtttctcc aagtatgcat actctacttg gagtgaagaa      1140
     catgtgattg tgctgcctct ctccggacga tatataagta tttacatatg cagtaagtat      1200
     ttttggcttt tcctgtacta cttttattgt aactagtaat cagtttgaat attattcata      1260
     aatagaggtg gcaggatgat ttcgtcattg tggtgactct atttgtgatt tctgtattat      1320
     taagtttcaa ataaaagtgc cgggtcgttg ttgttgtagg tgaaatatcg attaggtgat      1380
     gttgcgattt tgtcgcaaca gtgactatgt ctggttctac ttacttgggt ggtgttatga      1440
     tttcgtcata acagtgactg taaacttcaa tcaggagaca                            1480
//