ID M11157; SV 1; linear; genomic RNA; STD; VRL; 3884 BP. XX AC M11157; XX DT 16-JUL-1988 (Rel. 16, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Rift Valley fever virus (phlebovirus, RVFV) M RNA segment, complete DE sequence, encoding glycoproteins G1 and G2. XX KW glycoprotein; nonstructural protein. XX OS Rift Valley fever virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus. XX RN [1] RP 1-3884 RX DOI; 10.1016/0042-6822(85)90320-4. RX PUBMED; 2998042. RA Collett M.S., Purchio A.F., Keegan K., Frazier S., Hays W., Anderson D.K., RA Parker M.D., Schmaljohn C., Schmidt J., Dalrymple J.M.; RT "Complete nucleotide sequence of the M RNA segment of Rift Valley fever RT virus"; RL Virology 144(1):228-245(1985). XX DR MD5; 1dc29a94453da3633c9d59551276a09c. DR EuropePMC; PMC3165796; 21715500. DR EuropePMC; PMC3168278; 21325481. DR EuropePMC; PMC3335152; 22539961. DR EuropePMC; PMC3838119; 24067954. XX FH Key Location/Qualifiers FH FT source 1..3884 FT /organism="Rift Valley fever virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:11588" FT mat_peptide <1..479 FT /note="nonstructural protein (NSm) (put.); putative" FT CDS 21..3641 FT /codon_start=1 FT /note="River Valley virus polyprotein" FT /db_xref="GOA:P03518" FT /db_xref="InterPro:IPR009878" FT /db_xref="InterPro:IPR009879" FT /db_xref="InterPro:IPR010826" FT /db_xref="InterPro:IPR016404" FT /db_xref="PDB:4HJ1" FT /db_xref="PDB:4HJC" FT /db_xref="PDB:5Y0W" FT /db_xref="PDB:5Y0Y" FT /db_xref="PDB:6EGT" FT /db_xref="PDB:6EGU" FT /db_xref="PDB:6F9F" FT /db_xref="PDB:6IEA" FT /db_xref="PDB:6IEB" FT /db_xref="PDB:6IEC" FT /db_xref="PDB:6IEK" FT /db_xref="UniProtKB/Swiss-Prot:P03518" FT /protein_id="AAA47450.1" FT /translation="MYVLLTILISVLVCEAVIRVSLSSTREETCFGDSTNPEMIEGAWD FT SLREEEMPEELSCSISGIREVKTSSQELYRALKAIIAADGLNNITCHGKDPEDKISLIK FT GPPHKKRVGIVRCERRRDAKQIGRETMAGIAMTVLPALAVFALAPVVFAEDPHLRNRPG FT KGHNYIDGMTQEDATCKPVTYAGACSSFDVLLEKGKFPLFQSYAHHRTLLEAVHDTIIA FT KADPPSCDLQSAHGNPCMKEKLVMKTHCPNDYQSAHYLNNDGKMASVKCPPKYGLTEDC FT NFCRQMTGASLKKGSYPLQDLFCQSSEDDGSKLKTKMKGVCEVGVQAHKKCDGQLSTAH FT EVVPFAVFKNSKKVYLDKLDLKTEENLLPDSFVCFEHKGQYKGTMDSGQTKRELKSFDI FT SQCPKIGGHGSKKCTGDAAFCSAYECTAQYANAYCSHANGSGIVQIQVSGVWKKPLCVG FT YERVVVKRELSAKPIQRVEPCTTCITKCEPHGLVVRSTGFKISSAVACASGVCVTGSQS FT PSTEITLKYPGISQSSGGDIGVHMAHDDQSVSSKIVAHCPPQDPCLVHGCIVCAHGLIN FT YQCHTALSAFVVVFVFSSIAIICLAVLYRVLKCLKIAPRKVLNPLMWITAFIRWIYKKM FT VARVAHNINQVNREIGWMEGGQLVLGNPAPIPRHAPIPRYSTYLMLLLIVSYASACSEL FT IQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSE FT LSCREGQSYWTGSISPKCLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMREN FT KCFEQCGGWGCGCFNVNPSCLFVHTYLQSVRKEALRVFNCIDWVHKLTLEITDFDGSVS FT TIDLGASSSRFTNWGSVSLSLDAEGISGSNSFSFIESPSKGYAIVDEPFSEIPRQGFLG FT EIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTTNLIDPFVVFERGSLPQTRNDKT FT FAASKGNRGVQAFSKGSVQADLTLMFDNFEVDFVGAAVSCDAAFLNLTGCYSCNAGARV FT CLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTVPEVEEEFMYSCDGDERP FT LLVKGTLIAIDPFDDRREAGGESTVVNPKSGSWNFFDWFSGLMSWFGGPLKLYSSFACM FT LHYQLGSFSSLYILEEQASLKCGLLPLRRPHRSVRVKVIC" FT mat_peptide 480..2090 FT /note="glycoprotein 2 (gp2) (put.); putative" FT mat_peptide 2091..3638 FT /note="glycoprotein 1 (gp1) (put.); putative" XX SQ Sequence 3884 BP; 1060 A; 781 C; 987 G; 1056 T; 0 other; acacaaagac ggtgcattaa atgtatgttt tattaacaat tctaatctcg gttctggtgt 60 gtgaagcggt tattagagtg tctctaagct ccacaagaga agagacctgc tttggtgact 120 ccactaaccc agagatgatt gaaggagctt gggattcact cagagaggag gagatgccgg 180 aggagctctc ctgttctata tcaggcataa gagaggttaa gacctcaagc caggagttat 240 acagggcatt aaaagccatc attgctgctg atggcttgaa caacatcacc tgccatggta 300 aggatcctga ggacaagatt tccctcataa agggtcctcc tcacaaaaag cgggtgggga 360 tagttcggtg tgagagacga agagatgcta agcaaatagg gagagaaacc atggcaggga 420 ttgcaatgac agtccttcca gccttagcag tttttgcttt ggcacctgtt gtttttgctg 480 aagaccccca tctcagaaac agaccaggga aggggcacaa ctacattgac gggatgactc 540 aggaggatgc cacatgcaaa cctgtgacat atgctggggc atgtagcagt tttgatgtct 600 tgcttgaaaa gggaaaattt ccccttttcc agtcgtatgc tcatcataga actctactag 660 aggcagttca cgacaccatc attgcaaagg ctgatccacc tagctgtgac cttcagagtg 720 ctcatgggaa cccctgcatg aaagagaaac tcgtgatgaa gacacactgt ccaaatgact 780 accagtcagc tcattacctc aacaatgacg ggaaaatggc ttcagtcaag tgccctccta 840 agtatgggct cactgaggac tgcaactttt gtaggcagat gacaggtgct agcctgaaga 900 aggggtctta tcctctccaa gacttgtttt gtcagtcaag tgaggatgat ggatcaaaat 960 taaaaacaaa aatgaaaggg gtctgcgaag tgggggttca agcacacaaa aagtgtgatg 1020 gccaactcag cactgcacat gaggttgtgc cctttgcagt gtttaagaac tcaaagaagg 1080 tttatcttga taagcttgac cttaagactg aggagaatct gctaccagac tcatttgtct 1140 gtttcgagca taagggacag tacaaaggaa caatggactc tggtcagact aagagggagc 1200 tcaaaagctt tgatatctct cagtgcccca agattggagg acatggtagt aagaagtgca 1260 ctggggacgc agcattttgc tctgcttatg agtgcactgc tcagtacgcc aatgcctatt 1320 gttcacatgc taatgggtca gggattgtgc agatacaagt atcaggggtc tggaagaagc 1380 ctttatgtgt agggtatgag agagtggttg tgaagagaga actctctgcc aagcccatcc 1440 agagagttga gccttgcaca acttgtataa ccaaatgtga gcctcatgga ttggttgtcc 1500 gatcaacagg gttcaagata tcatcagcag ttgcttgtgc tagcggagtt tgcgtcacag 1560 gatcgcagag tccttccacc gagattacac tcaagtatcc agggatatcc cagtcttctg 1620 ggggggacat aggggttcac atggcacacg atgatcagtc agttagctcc aaaatagtag 1680 ctcactgccc tccccaggac ccgtgtttag tgcatggctg catagtgtgt gctcatggcc 1740 tgataaatta ccagtgtcac actgctctca gtgcctttgt tgttgtgttt gtattcagtt 1800 ctattgcaat aatttgttta gctgttcttt atagggtgct taagtgcctg aagattgccc 1860 caaggaaagt tctgaatcca ctaatgtgga tcacagcctt catcagatgg atatataaga 1920 agatggttgc cagagtggca cacaacatta atcaagtgaa cagggaaata ggatggatgg 1980 aaggaggtca gttggttcta gggaaccctg cccctattcc tcgtcatgcc ccaatcccac 2040 gttatagcac atacctgatg ttattattga ttgtctcata tgcatcagca tgttcagaac 2100 tgattcaggc aagctccaga atcaccactt gctctacaga gggtgttaac accaagtgta 2160 gactgtctgg cacagcattg atcagagcag ggtcagttgg ggcagaggct tgtttgatgt 2220 tgaagggggt caaggaagat caaaccaagt tcttaaagat aaaaactgtc tcaagtgagc 2280 tatcatgcag ggagggccag agttattgga ctgggtccat tagccctaaa tgtttgagct 2340 caaggagatg ccaccttgtc ggggaatgcc atgtgaatag gtgtctgtct tggagggaca 2400 atgaaacttc agcagagttt tcatttgttg gggaaagcac gaccatgcga gagaataagt 2460 gttttgagca atgtggagga tgggggtgtg ggtgtttcaa tgtgaaccca tcttgcttat 2520 ttgtgcacac gtatctgcag tcagttagaa aagaggccct tagagttttt aactgtatcg 2580 actgggtgca taaactcact ctagagatca cagactttga tggctctgtt tcaacaatag 2640 acttgggagc atcatctagc cgtttcacaa actggggttc agttagcctc tcactggacg 2700 cagagggcat ctcaggctca aatagctttt ctttcattga gagcccaagc aaagggtatg 2760 caattgttga tgagccattc tcagaaattc ctcggcaagg gttcttgggg gagatcaggt 2820 gcaattcaga gtcctcagtc ctgagtgctc atgaatcatg ccttagggca ccaaacctta 2880 tctcatacaa gcccatgata gatcaattgg agtgcacaac aaatctgatt gatccctttg 2940 ttgtctttga gaggggttct ctgccacaga caaggaatga taaaaccttt gcagcttcaa 3000 aaggaaatag aggtgttcaa gctttctcta agggctctgt acaagctgat ctaactctga 3060 tgtttgacaa ttttgaggtg gactttgtgg gagcagccgt atcttgtgat gccgccttct 3120 taaatttgac aggttgctat tcttgcaatg caggggccag ggtctgcctg tctatcacat 3180 ccacaggaac tggatctctc tctgcccaca ataaggatgg gtctctgcat atagtccttc 3240 catcagagaa tggaacaaaa gaccagtgtc agatactaca cttcactgtg cctgaagtag 3300 aggaggagtt tatgtactct tgtgatggag atgagcggcc tctgttggtg aaggggaccc 3360 tgatagccat tgatccattt gatgataggc gggaagcagg gggggaatca acagttgtga 3420 atccaaaatc tggatcttgg aatttctttg actggttttc tggactcatg agttggtttg 3480 gagggcctct taaactatac tcctcatttg cctgtatgtt gcattatcaa ttgggctctt 3540 tttcctcctt atatatcttg gaagaacagg cctctctaaa atgtggcttg ctgccactaa 3600 gaaggcctca tagatcagta cgtgtaaaag taatatgttg aaataagtag acacaagcaa 3660 acctaattat gtaagtgttg tacagatagg tcaaattatt ggaatatcca agcttagaaa 3720 cttatgcaat aatactttag atgtaagctt agttgtaatt tggggtggtg gggtgaggca 3780 gcagcagtct caagtgcttg tgaatattct agttggcgta atcgtctttt gccagattag 3840 ctgggaatta aactaactct ttgaagttgc accggtcttt gtgt 3884 //