ID L54073; SV 1; linear; genomic RNA; STD; VRL; 3620 BP. XX AC L54073; XX DT 30-DEC-1995 (Rel. 46, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Rice hoja blanca virus membrane-associated protein (pv2) and membrane DE glycoprotein (pc2) genes, complete cds. XX KW pc2 gene; pv2 gene; membrane glycoprotein. XX OS Tenuivirus oryzalbae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-3620 RX DOI; 10.1007/BF01701809. RX PUBMED; 8560781. RA De Miranda J.R., Hull R., Espinoza A.M.; RT "Sequence of the PV2 gene of rice hoja blanca tenuivirus RNA-2"; RL Virus Genes 10(3):205-209(1995). XX RN [2] RP 1-3620 RX DOI; 10.1007/BF00284643. RX PUBMED; 8883360. RA De Miranda J.R., Munoz M., Wu R., Hull R., Espinoza A.M.; RT "Sequence of rice hoja blanca tenuivirus RNA-2"; RL Virus Genes 12(3):231-237(1996). XX DR MD5; 02a3e3c0dd897502013a3c6ab3302bec. DR EuropePMC; PMC6456217; 30921434. XX FH Key Location/Qualifiers FH FT source 1..3620 FT /organism="Tenuivirus oryzalbae" FT /strain="Costa Rica" FT /mol_type="genomic RNA" FT /clone="N57, N58, r2-H, r2-R, r2-AA and r2-CC" FT /db_xref="taxon:3052764" FT 5'UTR 1..81 FT /function="replication origin and subgenomic mRNAs" FT /note="putative" FT /citation FT /citation FT CDS 82..684 FT /codon_start=1 FT /gene="pv2" FT /function="unknown, possible membrane associated function" FT /note="putative" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:Q89762" FT /citation FT /citation FT /protein_id="AAB39004.1" FT /translation="MAVLLYDNDYYQLLVETNRHYGSYQKLFAHDGTKEDHYMSVSDSS FT WILTFYKGELSSAMKSYCVCVGAHCLNVLSQTSNALHESKVKCWLCDKEAYMTTTHLKV FT VKLTNLINGFELATESYQLCMKTHSADDPSKYIGEICFPPHLKGYMKDKQKFNHKFMVV FT TNGFSTNNNFRPIRLTTETVEDSDQYVLVGNFKCPLT" FT misc_feature 689..1048 FT /function="intergenic region; possible subgenomic mRNA FT terminators" FT /note="putative" FT /citation FT /citation FT CDS complement(1049..3553) FT /codon_start=1 FT /gene="pc2" FT /product="membrane glycoprotein" FT /note="putative" FT /db_xref="GOA:Q86126" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:Q86126" FT /citation FT /protein_id="AAB39005.1" FT /translation="MYICILILPILVLITPSNSRSITKEDWMMSKDADPGKAIIQISCA FT YRNKPCKQPTLLNGYYIEDGSVCYNHGPINLHETCFSGSYDNKIPVHEIFASCGGTRYV FT DCKDEIVSKTTLVGFSQTQHTSKVLPINRENGLLVSYPYSEDKAFRGFVYVENITYCTE FT NSTRNVLANDATSLEHPVVCEDGKLFASSAECDIRVSETQLHVPSCSNVKLPVYDDQIE FT VCQNNFCKNVTCTVSSACVAYNRMDFLSRVKNYECSKTYKYYGYVLTLILIVFICMCGI FT IVVNILICLKPVFWVIKTVMYALAGLCHKKPKLRMMEIDMAEVRVVDDTGDGLLLPEES FT HAPNSNVPDIVRQKARRLSNGLIYVPYIFMLIAISLDSANCLCNDLLTSLSDVEVCTGK FT DCTYSSKLQLTLYNTPQDFCFKSSSDVYKLRISKITINCLSRPLYYTNSYKKSIGKEEW FT KCTESIRCSTDMSSTIWDKDDSLHYDYCISDFHVFSYCPFYHYNWKRILYTPTSRLACS FT VKKCTVVQFEINGHLSKNGLVIHEFTGFQAVHEAGILNIGILNYNMQKLPAEYVECDGK FT AYERKSNDLGSFDKELMGSIQCPTMRDAELLTSKCQTKIEALEDSKIISYEDNDGINKL FT ADTLTEPLRGVVVSEKGISLDSMDILPMSISITSNVKISSILTSRISMNNTNCEIKGVE FT RKLKKTVIKVMTPTRLVLSDVLICKDIASCSLTFNKDDRAECYTTSYKVDGTGEVIQCK FT FLYSGDSVMCKYDVSPIDIVVVAPKIDLSSFDNVKTTSQTWSTFIMDMIRENPKLTIIA FT SILPIGFFLKTMKKTYLELMDD" FT 3'UTR complement(3554..3620) FT /function="replication origin and subgenomic mRNA" FT /note="putative" FT /citation XX SQ Sequence 3620 BP; 1174 A; 723 C; 618 G; 1105 T; 0 other; acacaaagtc ctgggtataa aagcaaagct tgaagaaact aaaaatctct tcagagaact 60 tgaataactt tcacaatcag catggctgtt ttactttatg ataatgacta ctatcaattg 120 ttggttgaaa cgaaccgaca ctatggctcc taccagaaac tcttcgcaca tgatggcact 180 aaggaagacc actacatgtc tgtttctgat tcatcatgga ttctaacttt ctataaggga 240 gagttgagtt ctgccatgaa aagctattgt gtttgtgtgg gagcgcattg cctcaatgtc 300 ctttcgcaaa ccagcaatgc tcttcatgag tccaaagtta aatgttggct ctgtgataaa 360 gaggcatata tgacaactac acacctaaaa gttgtcaagc tgactaatct aattaatggg 420 ttcgagcttg ctactgagtc ttatcaactt tgtatgaaga cgcatagtgc agatgaccca 480 tctaagtaca ttggggaaat ttgctttcca cctcacctga aaggctacat gaaagacaag 540 cagaagttta accataagtt catggtggtg actaatggct tttcaaccaa caataacttc 600 aggccaatca gattaacaac agagactgtt gaggactcag accaatatgt tcttgttgga 660 aatttcaaat gcccacttac atgaatgaca ctaaataaga ctcaggtcca agaaaatcaa 720 aaaattgaaa aaacaaaaaa acaaaaaaat caaaaaaatc aaaaaaatct aaaaatcaag 780 aaaatcaaaa aaatcagaaa ataacaaaaa ccaaaaacca aaaaaaccaa aaaaacggaa 840 aaaccaaaag tacaaaagct atgaaaaacc atgcagaaag aaataaaggg gcaaaaaaca 900 acaaaagaat cgaataacca aaaaactaaa aaagtgtgct aagcacctta tccggatagt 960 gagcctagct cagtttgtat ttttggtatt ttgtgtttct gccgttcaga tattattgca 1020 gtcctttagc ctcttcatta tacttgcatc agtcatccat tagctctaga taggttttct 1080 tcatagtttt aaggaagaag cctatgggaa gaatagaagc tatgatagtc aatttggggt 1140 tctccctaat catgtccata ataaatgtac tccaggtctg actggttgtt ttcacattat 1200 cgaaacttga taaatctatc ttcggagcaa cgaccactat gtcaatagga gatacatcat 1260 atttgcacat gacactatca ccagagtata agaatttaca ctgtatcact tccccagtcc 1320 catcaacttt ataagatgtt gtgtaacatt ctgccctatc atctttatta aaagtgaggg 1380 aacagctagc tatatcttta catatcaaca catcactcaa gacaagtctt gttggagtca 1440 tcactttaat cacagttttc ttcaacttcc tctcaacacc tttgatctca cagtttgtgt 1500 tgttcataga tatacggcta gttaaaatac tggatatttt gacattggat gtgatagata 1560 ttgacatagg cagaatgtcc atgctgtcca aggatatacc tttctcagac actactactc 1620 ccctcaatgg ttctgtcaaa gtgtctgcca gcttattaat accatcatta tcctcataag 1680 agataatttt ggagtcttca agggcttcta tcttagtctg gcacttcgat gtcagcaatt 1740 ctgcatctct catagtaggg cactgaatgc ttcccatcaa ttctttgtca aaagaaccaa 1800 gatcattgct cttcctctca tatgccttgc catcacattc tacatactca gctgggagtt 1860 tctgcatatt gtaattgagt attcctatat ttagaatgcc tgcttcatga actgcttgga 1920 atcctgtgaa ttcatgaatc actagtccat tcttactgag gtgtccatta atttcaaatt 1980 gcacaactgt gcattttttt acagaacaag ccaatctgct tgttggagtg tatagtatcc 2040 tcttccagtt ataatgatag aatgggcaat acgaaaaaac atggaaatca gagatgcagt 2100 agtcataatg gagactgtca tctttgtccc aaattgttga actcatatcg gttgaacagc 2160 gaatgctctc agtacatttc cactcttctt tgccaataga ctttttgtaa ctgtttgtat 2220 aataaagagg tctggacaaa caattgatgg ttattttgga tattctcaat ttatacacat 2280 ctgatgaaga tttgaaacag aagtcctgtg gagtgttata taaggttagt tgaagcttag 2340 aactgtatgt gcagtctttc cctgtacaaa cttccacatc agataaacta gttagcaagt 2400 cattacagag gcaatttgca gagtccagtg agatagctat taacataaat atgtagggta 2460 catagatcag accattggat aatctcctag ctttctgcct gacaatatct ggaacattgc 2520 tatttggtgc atgcgactcc tcaggtaaga gcaatccatc accagtgtcg tcaactactc 2580 tcacctctgc catatctatc tccatcattc taagctttgg ttttttatga cacaaccctg 2640 ccagtgcata catgacagtc tttattaccc agaacactgg tttgaggcat atcagtatgt 2700 tgacaacaat gattccacac atacagataa atactatcaa tatcaaggtc agtacatagc 2760 catagtattt ataagttttt gaacattcat agtttttgac tctagatagg aaatccattc 2820 tattatatgc aacacaagca ctactgacag tgcacgtgac atttttacag aaattattct 2880 ggcaaacttc tatttggtca tcatacactg ggagcttaac attagaacaa cttggaacat 2940 gaagttgagt ctcactcact cttatatcac actcagcaga agaagcaaac agtttcccat 3000 cttcacatac aactggatgt tctaaacttg ttgcatcatt ggccaaaaca tttctagtgc 3060 tattctcggt gcaatatgtt atattctcaa catacacgaa gcctctaaat gctttgtctt 3120 ctgagtaagg ataagagacc agcaacccat tttctctatt aatgggtagg acctttgaag 3180 tgtgctgggt ttgagaaaaa ccgactagag ttgttttaga gacaatctca tctttgcaat 3240 caacatatct agttcctcca caagaagcaa aaatctcatg cactggtatc ttgttgtcat 3300 agctaccact gaagcaagtt tcatggaggt ttattggacc atgattgtaa cagacacttc 3360 catcttcgat ataatagcca ttaagcaacg ttggctgctt gcatggcttg ttcctataag 3420 cacatgatat ctggatgatt gctttaccag gatcagcatc tttgctcatc atccaatctt 3480 ctttggttat agatctagaa ttggatggtg tgatcaagac caagataggc agtattaaaa 3540 tacagatata catcttagta aatgaagatg tttcagcact ccttttaata taatcttttt 3600 atgataccca gactttgtgt 3620 //