ID L37902; SV 1; linear; genomic RNA; STD; VRL; 6562 BP. XX AC L37902; XX DT 27-SEP-1995 (Rel. 45, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Sin Nombre virus (NM R11) RNA L segment encoding RNA polymerase (L DE protein), complete cds. XX KW viral RNA polymerase (L protein). XX OS Orthohantavirus sinnombreense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; OC Orthohantavirus. XX RN [1] RP 1-6562 RX PUBMED; 7494336. RA Chizhikov V.E., Spiropoulou C.F., Morzunov S.P., Monroe M.C., Peters C.J., RA Nichol S.T.; RT "Complete genetic characterization and analysis of isolation of Sin Nombre RT virus"; RL J. Virol. 69(12):8132-8136(1995). XX DR MD5; 8678a6ed6081cc7070d2ad48967503fb. DR EuropePMC; PMC3944872; 24565589. XX FH Key Location/Qualifiers FH FT source 1..6562 FT /organism="Orthohantavirus sinnombreense" FT /map="viral genome L segment" FT /host="Peromyscus maniculatus" FT /lab_host="E6 Vero cells" FT /isolate="NM R11" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052499" FT CDS 36..6497 FT /codon_start=1 FT /product="viral RNA polymerase (L protein)" FT /note="putative" FT /db_xref="GOA:Q89709" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:Q89709" FT /protein_id="AAC42205.1" FT /translation="MEKYREIHQRVKEIPPGGASALECLDLLDRLYAVRHDVVDQMIKH FT DWSDNKDMERPIGQVLLMAGVPNDVIQGMEKKVIPTSPSGQILKSFFRMTPDNYKITGA FT LIEFIEVTVTADVAKGIREKKLKYESGLQFVESLLSQEHKKGNINQAYKITFDVVAVKT FT DGSNISTQWPSRRNDGVVQHMRLVQADINYVREHLIKPDERASLEAMFNLKFHVGGPKL FT RYFNIPDYKPQSLCQPEITNLIQYCKHWLTEDHDFVFKEVTGNNVMNSFENNESVYMSR FT YRESRKPRNFLLIQGSIQGPYLPSTISSDQCDTRIGCLEVLKVHPETPVQAIAVDMAYK FT YMELNRDEIINYYNPRVHFQATQSVKEPGTFKLGLSQLNPMSKSILDQVGKHKSEKGLF FT GEPLESINISSQIQQNECSRIIESILSNLEINVGEVTMSLANPRKTTGVDELLGKFYEN FT ELSKYLISILRKTAAWHIGHLIRDITESLIAHAGLKRSKYWSIHAYDHGGVILFILPSK FT SLEVVGSYIRYFTVFKDGIGLIDEENLDSKVDIDGVQWCFSKVMSIDLNRLLALNIAFE FT KALLATATWFQYYTEDQGHFPLQHALRSVFSFHFLLCVSQKMKICAIFDNLRYLIPAVT FT SLYSGYELLIEKFFERPFKSALEVYLYNIIKALLISLAQNNKVRFYSKVRLLGLTVDHS FT TVGASGVYPSLMSRVVYKHYRSLISEATTCFFLFEKGLHGNLNEEAKIHLETVEWARKF FT EAKERKYGDILMREGYTIDAIRVGDVQVEQQLFCQEVVELSAEELNKYLQAKSQVLSSN FT IMNKHWDKPYFSQTRNISLKGMSGALQEDGHLAASVTLIEAIRFLNRSQTNPNVIDMYE FT QTKQHKAQARIVRKYQRTEADRGFFITTLPTRVRLEIIEDYYDAIARVVPEEYISYGGD FT KKILNIQTALEKALRWASGSSEVITSTGNVIKFKRRLMYVSADATKWSPGDNSAKFKRF FT TQALYDGLSDEKLKCCVVDALRHVYETEFFMSRKLHRYIDSMDEHSEAVQDFLDFFKGG FT VSATVKGNWLQGNLNKCSSLFGAAVSLLFRRIWAELFPELECFFEFAHHSDDALFIYGY FT LEPEDDGTDWFLYVSQQIQAGNYHWHAVNQEMWKSMFNLHEHLLLMGSIKVSPKKTTVS FT PTNAEFLSTFFEGCAVSIPFIKILLGSLSDLPGLGFFDDLAAAQSRCVKAMDLGASPQL FT AQLAVVICTSKVERLYGTADGMVNSPVAFLKVTKAHVPIPLGGDGSMSIMELATAGIGM FT ADKNILKQAFYSYKHTRRDGDRYVLGLFKFLMSLSEDVFQHDRLGEFSFVGKVQWKVFT FT PKNEFEFFDQFSQSYLKSWTNQHPVYDYIIPRGRDNLLVYLVRKLNDPSIVTAMTMQSP FT LQLRFRMQAKQHMKVCKLEGEWVTFREVLAAADSFATKYNPTEKDLDLFNTLVSCTFSK FT EYAWKDFLNEVRCEVVPTKHVHRSKIARTFTVREKDQAIQNPITAVIGYKYASTVDEIS FT DVLDSSFFPDSLSADLQVMKEGVYRELGLDIGLPEVLKRIAPLLYKAGRSRVVIVEGNV FT EGTAESICSYWLRSMSLVKTIKVRPKKEVLRAVSLYSTKENIGLQDDVAATRLCIEVWR FT WCKANDQNVNDWLNALYFEKQTLMDWVERFRRKGVVPIDPEIQCIALLLYDVLGYKSVL FT QMQANRRAYSGKQYDAYCVQTYNEETRLYEGDLRVTFNFGLDCARLEIFWDKKEYILET FT SITQRHVLKLMMEEVTQELLRCGMRFKTEQVSHTRSLVLFKTESGFEWGKPNVPCIVFK FT HCALRTGLRTKQAINKEFMINVQADGFRAIAQMDMESPRFLLAHAYHTLRDVRYQAVQA FT VGNVWFQTAQHKLFINPIISSGLLENFMKGLPAAIPPAAYSLIMNKAKISVDLFMFNEL FT LALVNPRNVLNLDGIEETSEGYSTVTSISSRQWSEEVSLMADDDIDDEEEFTIALDDID FT FEQINLDEDIQHFLQDESAYTGDLTIQTEEVEVKRIRGVTRVLEPVKLIKSWVSKGLAI FT DKVYNPIGIVLMARYMSKNYDFSKIPLALLNPYDLTEFESVVKGWGETVNDRFLEVDND FT AQRLVREKNILPEDILPDSLFSFRHVDVLLKRLFPHDPVSSFY" XX SQ Sequence 6562 BP; 2102 A; 1009 C; 1448 G; 2003 T; 0 other; tagtagtaga ctccgagata gagaaattca ggaaaatgga aaaatatagg gagattcatc 60 aaagagtcaa ggagattcct cctggggggg cttctgcatt agaatgttta gatttgcttg 120 accgtcttta tgcagtcaga catgatgtag ttgatcagat gatcaagcat gattggtctg 180 acaataaaga tatggaaaga cctataggtc aagttctgtt aatggctggt gtaccaaatg 240 atgtgattca aggtatggag aagaaagtta tacctacaag cccttcagga cagattttaa 300 aaagcttttt ccgcatgaca cctgataatt ataaaatcac aggtgcctta attgagttta 360 tcgaggtaac agtgactgca gatgttgcta aaggtatccg tgaaaagaaa ttaaagtatg 420 agagtggtct tcagtttgtg gagtctttat taagtcaaga acacaaaaaa ggtaatataa 480 atcaagctta taagatcaca tttgatgttg tggctgtaaa gacggatggt tcaaacatat 540 caactcaatg gcctagtcgg cgtaatgatg gtgttgttca acatatgagg cttgttcagg 600 ctgatattaa ttatgttaga gaacatctca ttaagcctga tgaacgtgca tcattagaag 660 ccatgtttaa tcttaagttt catgtaggag gccctaaact gaggtatttt aatataccag 720 attacaagcc tcagtcatta tgtcaacctg agattacgaa tttaattcaa tattgcaagc 780 actggctcac agaagatcat gattttgttt ttaaggaagt cacgggtaat aatgttatga 840 actcatttga gaataatgaa agtgtatata tgtctagata cagggagtct cgtaaaccac 900 gtaatttctt attaattcaa ggttctattc aaggtcctta tttaccatca actattagct 960 ctgaccagtg tgacacaaga attggctgtt tggaggtgtt aaaagtacat ccagagacac 1020 cagtacaagc aattgcagtg gatatggcat ataagtatat ggagttaaat agagatgaga 1080 tcatcaacta ctacaatcct agagttcatt ttcaagcaac tcagtcagtg aaggaaccag 1140 gtacattcaa attaggactt tctcaactaa atccgatgtc taaatcaata ttggaccagg 1200 ttgggaaaca caagtcagaa aagggccttt ttggtgaacc attagagagt ataaacatat 1260 caagccagat tcaacagaat gagtgttcac gtattataga atcaatactt tcaaatctcg 1320 aaataaatgt tggtgaggta acaatgagtc tagctaatcc tcgtaaaact acaggtgtag 1380 atgagttgtt aggtaagttc tatgagaatg aactgtctaa gtatttgatc agcatattac 1440 gaaaaactgc agcctggcat attgggcatt taataagaga tataacagaa agtctcattg 1500 ctcatgcagg tttaaagcgg tctaaatact ggtcaatcca tgcttatgat catggtgggg 1560 taatattgtt catccttcct tcaaagtctt tagaggttgt cggatcttat attcggtatt 1620 tcacagtatt caaagatggt atagggctta tagatgagga aaatttagac tcaaaggtag 1680 acatcgacgg tgtgcagtgg tgtttttcaa aagtaatgag tattgactta aacaggttgt 1740 tagctttaaa tattgccttt gaaaaggcac ttcttgctac tgccacttgg tttcaatatt 1800 acacagaaga ccaagggcat tttccattac aacatgcatt aaggtctgtg ttctcttttc 1860 attttttatt atgtgtttct cagaaaatga agatatgtgc aatttttgat aatttacgct 1920 atttgatccc agctgtcaca tcattatatt caggttatga gctcttaata gaaaaattct 1980 ttgagcggcc gtttaagagt gccttagaag tatatttata taatataata aaagcattgc 2040 ttataagcct agcacaaaat aataaggtac gattctactc taaagtgcgt cttcttggcc 2100 tcactgtcga tcactcaact gtaggtgcaa gtggagttta tccttcattg atgtctagag 2160 ttgtttataa gcactatcgt agtcttattt ctgaagcaac aacatgtttc tttctttttg 2220 aaaagggcct acacggaaat ctaaatgagg aggctaaaat acatcttgag actgtagagt 2280 gggcaagaaa gtttgaggca aaagagagaa aatatggaga catattaatg agggaaggtt 2340 acacgattga tgctatacgt gttggtgatg tgcaggtaga acaacaatta ttttgtcaag 2400 aggttgtgga gttaagtgca gaagaactca acaagtattt acaagcaaaa agtcaggtct 2460 tatcatccaa tatcatgaat aaacattggg ataagccgta ttttagtcag acaaggaata 2520 taagtttaaa gggtatgtct ggagcattgc aagaagatgg acatcttgca gcaagtgtta 2580 cgttaattga ggcaattaga tttttaaata gatcacagac taatccaaac gttattgaca 2640 tgtatgaaca gacaaagcag cacaaagctc aagcacgtat tgtgaggaaa tatcagcgga 2700 ccgaagctga tagaggtttt ttcatcacta ctctcccgac aagagtcagg ttagaaatta 2760 tagaagatta ttatgatgca atagctagag ttgtcccaga ggaatatata tcatacggag 2820 gagacaagaa aattctaaat atacagactg cattagagaa ggcattacga tgggcttcag 2880 gatcatcaga ggtcataaca agcacaggaa atgtaattaa attcaagagg aggctgatgt 2940 atgtgagtgc tgatgccacg aaatggtcac caggagataa ttcggcaaag tttaagagat 3000 tcacacaggc attatatgat ggcttgtcag atgagaagtt aaaatgttgc gttgttgatg 3060 cccttagaca tgtttatgaa acagagttct ttatgtccag aaaacttcat cgctatatag 3120 attctatgga tgagcattct gaggctgtcc aagatttcct cgattttttt aagggtggag 3180 tgtctgctac agtcaaaggt aattggctcc aaggtaactt gaacaaatgt tcttcattgt 3240 ttggggctgc agtgtcactg ctgtttaggc gtatttgggc agagttattt ccagaattag 3300 aatgcttttt tgagtttgca catcactcag atgatgccct ctttatttat ggttatttag 3360 agccagaaga tgatggaact gattggtttt tatatgtatc tcaacagata caggctggta 3420 attatcactg gcatgctgtt aaccaagaga tgtggaagag catgtttaat ttgcatgagc 3480 atttactgct gatgggctcc ataaaggtat ccccaaaaaa gacaacagtt tctcctacaa 3540 atgcagaatt tctttccaca ttttttgaag gttgtgcggt gtcaatccct tttataaaaa 3600 tactgcttgg atcgttatca gatttaccag gattaggatt ctttgatgat ctggctgctg 3660 cacaaagtag atgtgtcaaa gcaatggact taggggcatc cccacagttg gcacaattag 3720 ctgttgttat ttgcactagt aaagttgaga gattatacgg cactgcagat gggatggtta 3780 atagtccagt ggcattttta aaggtaacga aggcccatgt acccatacct ttaggaggtg 3840 atggctcaat gtctattatg gagcttgcca cagcaggtat aggtatggct gataaaaata 3900 ttctcaagca agcattttat tcttacaagc atacaagacg tgatggggat aggtatgttt 3960 tgggtctttt caagttctta atgtctctta gtgaagatgt ttttcagcat gatagactag 4020 gtgagtttag ttttgttggt aaagttcagt ggaaggtatt cacacctaaa aatgagtttg 4080 aattctttga tcaattttca cagtcctact taaagagttg gacaaatcaa cacccagtat 4140 atgattatat tatacctaga ggtagggata atcttttagt ctatttagtc agaaaattaa 4200 atgaccctag tattgtcaca gctatgacaa tgcaatctcc attacaactt agattcagga 4260 tgcaggcaaa gcagcacatg aaagtgtgta agcttgaagg ggaatgggtg acattcagag 4320 aagttttagc tgcagcagac agttttgcaa ctaagtacaa tcccacagaa aaggacttag 4380 atctgtttaa tacattagtt agttgtacat tttctaaaga gtatgcatgg aaagatttct 4440 tgaacgaagt taggtgtgaa gtggtaccta caaaacatgt ccatcggtca aaaatcgcaa 4500 gaacttttac agtgcgtgag aaggatcaag ctattcagaa tccaattact gctgttatag 4560 ggtataaata tgcttcaact gtagatgaaa tcagtgatgt tttagatagt tccttttttc 4620 ctgattcatt atctgctgac cttcaagtca tgaaggaagg tgtgtataga gagctgggtt 4680 tagatatagg tcttcctgag gtgttgaagc gaatagcacc acttttgtac aaagctggga 4740 gatctagagt tgttatagtg gaaggcaacg tagagggcac agcagaatca atttgtagct 4800 attggcttcg tagcatgtca ttggtcaaaa caatcaaagt acgtccaaaa aaagaagtgc 4860 tcagagcagt ttcactatat agcacaaagg aaaatattgg gttacaagat gatgttgcag 4920 ctacacgatt gtgtatagaa gtctggagat ggtgcaaagc taatgatcag aatgtaaatg 4980 actggttaaa tgcactgtac tttgaaaagc aaactctcat ggattgggta gaaaggttcc 5040 gtagaaaagg agtggttcct attgaccctg aaattcagtg tattgcctta ctactttatg 5100 atgtgttagg ttataagagt gtattgcaga tgcaggcaaa taggcgagca tattcaggga 5160 aacagtatga tgcatattgt gttcaaacgt ataatgaaga aacaagactc tatgagggag 5220 atttaagggt cacatttaat tttggccttg attgtgcaag gttggaaatc ttttgggata 5280 agaaagaata tattcttgaa acatcaatta cgcaacgtca tgttttaaag ttgatgatgg 5340 aggaagtcac acaagaattg ttaaggtgtg ggatgagatt taagacagag caagtaagtc 5400 atacgaggag tttggtttta ttcaaaacgg aatcagggtt tgagtggggt aaaccaaatg 5460 tgccgtgtat agtcttcaag cattgtgctt tacgtacagg tttaaggact aagcaagcta 5520 ttaataaaga gttcatgata aatgtccaag cagatgggtt tagagctata gcacagatgg 5580 atatggaaag tccgagattt ctattagcac atgcttatca tacattacgt gatgtgcgtt 5640 accaagctgt gcaggctgta ggcaatgtgt ggtttcaaac tgctcaacat aaattattca 5700 taaatccaat aatatcatcc gggttgttag aaaactttat gaaaggcttg ccagcagcaa 5760 ttcctcctgc agcttattct ttaattatga ataaggctaa gatatctgta gatttattta 5820 tgttcaatga gttgctggct ttagttaacc caagaaatgt tctcaatttg gacggaatag 5880 aagagacttc agaaggatat agtacagtaa cctctatatc tagccgacaa tggtctgaag 5940 aggtaagtct tatggctgat gatgacattg atgatgaaga agaatttaca atagctcttg 6000 atgatataga ctttgagcag atcaatcttg atgaggacat ccaacatttt ttgcaagatg 6060 aatcagctta tactggtgat ttaacaatac aaacagagga agttgaggta aaaaggatac 6120 ggggtgtaac gcgcgtgctt gaaccagtta agctaattaa gagctgggtt tcgaaagggc 6180 ttgctatcga taaagtgtat aaccctatag ggatagtgct gatggcaagg tacatgtcaa 6240 agaattatga ttttagcaaa attcccctag ctttattaaa cccatatgat ttaactgagt 6300 ttgaaagtgt tgtcaaaggc tggggtgaaa ctgttaatga cagatttcta gaggttgaca 6360 atgatgcaca acggttggtc cgagagaaaa acatattgcc cgaagacata ttaccagatt 6420 cattattttc ttttaggcac gttgatgtgt tgttaaagag actattccct catgaccctg 6480 tgtcttcatt ctattaacaa ttttctttat tccaaaccat gacttgttct ctctactgct 6540 ctgttctcgg agcatactac ta 6562 //