ID L34672; SV 1; linear; genomic RNA; STD; VRL; 4109 BP. XX AC L34672; XX DT 23-JUL-1994 (Rel. 40, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Southern bean mosaic virus p11.5 protein gene, complete cds, p96 protein DE gene, complete cds, coat protein gene, complete cds. XX KW coat protein; p11.5 protein; p96 protein; polymerase; protease. XX OS Southern bean mosaic virus OC Viruses; Riboviria; Solemoviridae; Sobemovirus. XX RN [1] RP 1-4109 RX DOI; 10.1016/S0042-6822(95)80044-1. RX PUBMED; 7831784. RA Othman Y., Hull R.; RT "Nucleotide sequence of the bean strain of southern bean mosaic virus"; RL Virology 206(1):287-297(1995). XX DR MD5; f87a9c62c13502fc6e0bbdf5d2007853. DR EuropePMC; PMC3791421; 23830075. DR RFAM; RF01838; sobemo_FSE. XX FH Key Location/Qualifiers FH FT source 1..4109 FT /organism="Southern bean mosaic virus" FT /strain="Bean" FT /mol_type="genomic RNA" FT /db_xref="taxon:12139" FT 5'UTR 1..92 FT CDS 93..416 FT /codon_start=1 FT /product="p11.5 protein" FT /db_xref="UniProtKB/TrEMBL:Q83471" FT /protein_id="AAA66949.1" FT /translation="MSYRFLTVRAFGFTGFHCDATRLLSETEVIDVPTSMTLLARPNSD FT LKLLGPSVKRIVTRFSLDSTFKLTSSITLCVSRLCAESALHPYLSFSASGTSTVVGEAI FT LFL" FT CDS 505..3090 FT /codon_start=1 FT /product="p96 protein" FT /function="polymerase, protease" FT /note="putative" FT /db_xref="GOA:Q83472" FT /db_xref="InterPro:IPR000382" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q83472" FT /protein_id="AAA66950.1" FT /translation="MYHPGRSPSFLITLANVICAAILFDIHRGVTNPAHYPIVAWIPRS FT LLCLVERVIRDIPYKYVRTRLLQRRRLPGYIAQSAVFVPLVYTDLIARMSETAWTTGTG FT YQLMSTGIRNADIVDTSTGSFTESADGYQQSRSVLCRHWPEERLRLAVYSDSEPRSIGP FT PRTVMMRLMVILLFTGHHVWNNSMAAPTALAKAGKQVADSTDWQTPLSCDHRCLICSGA FT CAKTVWSKLGVKATQLVCPSDKDAVTCYGGSSSDNLLSGTGVCSKVDFSSKLTHSCPTA FT AWSEWNTDLLCRGVVGMHVGFEDIGKLNRGVNAFYVSNYLLRSQETLPPELSVIEIPFE FT DVETRSYEFIEVEIKGRGKAKLGKREFAWIPESGKYWADDDDDSLPPPPKVVDGKMVWS FT SAQETVADALNYQRAAGSRPLPPFSTCRLRLQRRRSSLYKRNALRFVGQSACKFRVCRK FT ILQMKSLELLGSSQNCQTSPGPSEAPKQSFTPCYAKQESLIPLESQGILKELVKTSLKA FT ATPPPNPVTVSVEKLVLRQQSTRSLQEERNRRKSTRKSSPGVPPLPPRLNQQRPPLRHL FT ELVALCVTERLFLLSEAEDLLDESPVDLVRRGLCDPVRLFVKQEPHASRKVREGRFRLI FT SSVSLVDQLVERMLFGPQNQLEIAEWEHIPSKPGMGLSLRQQAKSLFDDLRVKHSRCPA FT AEADISGFDWSVQDWELWADVEMIIVLGGFGHKLAKAARNRFSCFMNSVFQLSDGTLIE FT QQLPGIMKRSLDLLTNSRIRCLMAELIGSPWCIAMGDDSVEGWVDGAKDKYMRLDTRAD FT YKPCATTISGRLYEVEFCSHVIRKIDVGWRRGLKLCLNTCLRASGSLRT" FT CDS 3196..3981 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q83473" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q83473" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA66951.1" FT /translation="MATRLTKKQLAQAIQNTLPNPPRRKRRAKRRAAQVPKPTQAGVSM FT APIAQGTMVRLREPSLRTAGGVTVLTHSELSTELSVTNAIVITSELVMPYTMGTWLRGV FT AANWSKYSLLSVTYTYLPSCPSTTSGSIHMGFQYDMADTLPVSVNQLSNLRGYVSGQVW FT SGSSGLCYINGTRCLDTANAITTTLDVGQLGKKWYPFKTSTDFTTAVGVNVNIATPLVP FT ARLIIAMLDGSSSTAVSTGRLYVSYTIQLIEPTALALNN" FT 3'UTR 3982..4109 XX SQ Sequence 4109 BP; 976 A; 1011 C; 1054 G; 1068 T; 0 other; cacaaaatat aagaaggaaa gctggatttc ctacctttgt gtttccattg tcgaagcatt 60 ggtcaacgat tacaaaacgg tgcattttct gcatgagcta tcgtttccta acagttagag 120 cattcggctt taccggtttc cattgcgacg ctacgcgctt gctaagtgaa acagaagtca 180 tagacgttcc tacgtccatg actttgttgg cgagaccgaa ctcagacttg aaactgcttg 240 gccccagtgt gaagagaatt gttacacgat tctccctcga ttcaacgttc aagttgactt 300 cgagtatcac cctgtgcgtg tcgagattgt gtgccgagtc tgcgctacat ccctatctgt 360 cattttcagc aagtgggact tctactgtag taggagaggc cattttgttc ctgtagatca 420 gaacggggat ctgtttagga ttggaacgct ccgggagacg ggagagaaat acttctactt 480 ctgtgataaa tctatctgta gacaatgtat catccaggcc gctcaccatc attcctgata 540 acgttggcaa acgttatctg cgcggcgatt ttgttcgaca tccatcgggg ggttaccaac 600 ccggctcact atccaatagt ggcctggata ccccgttcgt tactctgcct ggttgagcgc 660 gtcattcgcg acatacctta taagtatgta agaactcggc tgctccagag gagaaggttg 720 ccaggctata tcgcgcagtc tgccgtattt gtcccgctgg tgtatacaga cttgatcgct 780 cgaatgtcgg agaccgcatg gaccaccggg accgggtatc aactgatgag cactggtatc 840 cgcaacgctg acattgttga tacgagtaca ggcagcttca ccgagtctgc ggacggttac 900 caacagtcac ggtcagtcct gtgcagacat tggcctgaag agcgtcttcg acttgccgtg 960 tattccgata gcgaaccacg aagcattggt cctcctcgga ctgtcatgat gagattgatg 1020 gtgatacttc ttttcactgg tcaccatgtt tggaataatt ccatggcggc tcctaccgct 1080 ctagctaaag ctggcaagca ggtcgctgac tcgacggatt ggcaaacccc actctcttgc 1140 gaccatagat gcttgatttg tagtggtgcg tgtgccaaaa cagtgtggtc caagctagga 1200 gtgaaagcga ctcaattggt ttgtccatca gataaggatg ccgtaacctg ttacggtgga 1260 tctagttcag acaacttact gtcggggacg ggcgtttgta gtaaggtcga tttctcatcc 1320 aagttaaccc actcatgccc cacggcagct tggtcggagt ggaacaccga tctactctgc 1380 agaggtgtgg taggaatgca cgttgggttt gaagatatcg gaaaactcaa tcgtggcgtg 1440 aacgctttct atgtgtcaaa ttacttattg aggtctcaag agactcttcc tccagagttg 1500 tccgtgatcg aaattccttt cgaagacgtt gagactcgga gttatgagtt cattgaggtt 1560 gagatcaaag gcagaggtaa ggccaaactt ggtaagcgtg agttcgcttg gattccagaa 1620 tcaggaaaat actgggctga tgatgacgac gattccttgc ccccaccccc taaggtggta 1680 gacggcaaga tggtttggag ttctgctcag gaaactgttg cggacgcttt aaactaccag 1740 cgggcggcag ggtcaaggcc cttgccgccc ttctcaactt gcaggctacg acttcaaaga 1800 aggagaagca gcctctacaa gaggaatgcc cttagatttg ttgggcagtc ggcttgcaag 1860 tttagagtgt gtagaaagat actccagatg aagtccttag agctactagg gtcttcccag 1920 aattgtcaga cttctcctgg cccgagcgag gctccaaagc agagcttcac tccctgctac 1980 gccaagcagg aaagtttaat cccactggaa tcccaaggaa tcttgaagga gcttgtcaaa 2040 acctccttga aagcagctac cccacctcca aatcctgtta ctgtctccgt ggagaagctg 2100 gtgcttcgac agcagtctac aagaagtctg caagaagagc gcaatcggcg gaaatcaacg 2160 agaaagtcca gtccaggagt cccgcctctc ccgcctcgcc tcaaccaaca aagacctcct 2220 ttgaggcacc tagagttagt tgctctgtgt gttaccgaga gattgtttct actcagcgaa 2280 gccgaggatt tacttgacga atctcctgtg gacttggttc gcaggggttt gtgtgacccg 2340 gttcggttgt ttgttaagca ggagccccac gcctcccgaa aggtgagaga gggtcgcttc 2400 cgcttgatat catctgtttc gctggttgat cagcttgtgg agcgtatgct ctttgggcct 2460 caaaaccagc ttgaaatcgc tgagtgggag catattccct caaaacccgg catgggctta 2520 tcgctgcggc aacaggccaa aagcttgttt gacgacttga gagttaaaca ctctcgttgt 2580 cctgcagctg aagctgacat ttcaggtttt gattggtctg ttcaggactg ggagttgtgg 2640 gctgatgtag agatgataat cgttctgggg ggctttggcc acaaactggc taaagccgcc 2700 aggaataggt tttcgtgttt catgaactca gtcttccagc tctcggatgg cacactcata 2760 gaacagcaat tgcctggtat tatgaagcgg tcattagacc tcctcaccaa ctccagaatt 2820 cgctgcctta tggctgagct cattggctcc ccgtggtgta tcgccatggg tgatgattct 2880 gttgaaggtt gggttgatgg ggcaaaggac aagtacatga gactagacac acgtgcagat 2940 tataaaccct gtgcaacaac catttccggt cgcttatacg aggtagagtt ctgctctcac 3000 gttataagga agatcgatgt tggttggcgt cgtggcctaa aactctgttt aaatacttgt 3060 ctgagggcaa gtggttcttt gaggacttag agcgagagct cagttcgtca ccccactggc 3120 ccagaatcag acactatgta gtggggaata ctccatcgcc ccacaaaatt aatttagaaa 3180 atcaaagtcc gcgctatggc tacccgtctg accaaaaaac agctggctca ggctatccag 3240 aacaccctgc cgaacccgcc gcgtcgtaaa cgtcgtgcta aacgtcgtgc tgctcaggtt 3300 ccgaaaccga cccaggctgg ggtatccatg gcccctattg ctcaggggac tatggttcgc 3360 ttacgtgaac catcgcttag aacggctgga ggtgtgacag tcctaacgca ctctgagctc 3420 tcaactgagc tctcagtgac gaatgcgata gtcatcacct ctgagctcgt tatgccctac 3480 acaatgggca cctggcttcg aggcgttgcg gctaattggt cgaaatatag tttgctgtcg 3540 gtcacatata cgtatctccc ctcttgtcct tcaacgacat ctgggtccat tcacatgggc 3600 ttccaatatg atatggctga cacccttccc gtatccgtta accagttatc caaccttaga 3660 ggttatgtat cagggcaggt ctggtctgga tcctctggct tgtgctacat aaatggcacg 3720 aggtgtcttg acacggccaa tgctatcacg accacactgg acgttggaca gcttggcaag 3780 aagtggtatc ctttcaagac tagcacagac ttcacaacgg ctgttggcgt aaatgtcaac 3840 attgccactc ccctggtccc ggcgaggcta ataatagcca tgctggatgg gtcgagttct 3900 acggctgtga gtactggacg cctatacgtg tcgtatacta ttcaactgat agagcccact 3960 gctttggcct tgaacaactg aaggagttgt ataataatac ctgcacccct ctccttggcg 4020 ggagggtgtt tcgctttcac atgccacgtg tttgagggag aatgcacgtt aatcatccct 4080 ccgctagtga tggagcgtaa tccaaaagt 4109 //