ID L28079; SV 1; linear; genomic RNA; STD; VRL; 2525 BP. XX AC L28079; XX DT 15-MAR-1994 (Rel. 38, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Shallot potyvirus (probably onion yellow dwarf virus) protease gene, DE partial cds, RNA-dependent RNA polymerase gene, partial cds. XX KW polyprotein; protease; RNA-dependent RNA polymerase. XX OS Shallot potyvirus OC Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus. XX RN [1] RP 1-2525 RA Zavriev S.K., Kondrikov D.Y., Levay K.E., Ryabov E.V.; RT "Shallot potyvirus (probably onion yellow dwarf virus); polyprotein RT precursor for parts of protease and RNA dependent RNA polymerase"; RL Unpublished. XX DR MD5; 3ab7a0eda86a5a4a10effbc491932861. XX FH Key Location/Qualifiers FH FT source 1..2525 FT /organism="Shallot potyvirus" FT /mol_type="genomic RNA" FT /note="Taxonomy is currently uncertain: probably onion FT yellow dwarf virus" FT /db_xref="taxon:33764" FT CDS <1..>2525 FT /codon_start=1 FT /product="polyprotein" FT /note="precursor for protease and RNA-dependent RNA FT polymerase; putative" FT /db_xref="GOA:Q85103" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:Q85103" FT /protein_id="AAA91583.1" FT /translation="FYNIYGFDPTDYSFARYVDPLTGATLDETTVTDINLIQDHFGAIR FT TKMRDEDLIDSAHLARHTNIECYYVKYLAKKVLKIDMSAHNPFRVSDKSNNIAGFPERT FT LNCVTQHHRRLYHMPYTDLPPAKGTNTIFEFEGKSLLSGLRDYNPIAACVCKLTNESDG FT VVTYIYGIGYRPFIITNQHLFCRNNGSLRINTHAGEFLVSNTCSLKMFPIPERDIIIIR FT LPKDFAPFPQRLKFRPTKIGEHVCLVSSNFQTRSTSSIISETSATAGTMNTNFFKHWIS FT TKQGQCGNPLVSVTDGCIVGIHSMASTVSSMNMYAGFPEKFVDMYLDNDSLEWTKGWKL FT NVDRSCWSGINLVNNKAEGLFKLTKDMFTLDDNKWEFQSGNKNWMFDKLSGNLKAVGRT FT SGNLVTKHSVKGKCMLFQTYLAVEPEEASYFTPLMGAYQKSALNKDAYIKDLCKYSGPI FT QVGSVNCEIFELAFSKVVKLLEKNGFHKCAYITNEHEILAALNMKAAVGALYSGKKRDY FT FKDFTDQDKYEIVKASCERLYLGKMGVWNGSLKAELRTAEKVAANKTRSFTAAPLDTLL FT GGKVCVDDFNNQFYSRHFDLPWTVGMSKFRKGWDTLLRKLPDNWIYCDADGSQFDSSLS FT PYLINAVLNLRLHFMEEWDVGETMLRNLYTEIVYTPIATPDGTIVKKFKGNNSGQPSTV FT VDNSLMVVFAMYYAMEMSEIEGIHSKCVFFVNGDDLLIAIDLGLRHSWIYYESYLINLG FT LNYTFDSRTRNKERLCFMSHVGILQNDIYIPKLEKERIVSILEWDRAQQPEHRLEAICA FT AMIEAWGYPDLLDRIRKFYCWILEQAPYS" XX SQ Sequence 2525 BP; 789 A; 479 C; 571 G; 686 T; 0 other; ttttacaata tatacggatt tgaccccaca gactattctt tcgcacgata tgtcgatccg 60 ttaactggtg ctacgctaga tgaaaccact gtaacagata tcaatttaat ccaggatcac 120 tttggtgcaa ttcggactaa aatgcgcgat gaagatttaa tcgattcagc gcaccttgca 180 cggcacacga atatagagtg ttactatgtg aagtatttag ctaaaaaggt tcttaaaatc 240 gacatgtctg cacataaccc attccgtgtg agtgacaagt caaacaacat tgctggattc 300 ccagagcgta ccttgaattg cgtcacacag caccaccgca ggttatacca tatgccatat 360 acagacttac caccagcgaa aggcacgaat acaatctttg agtttgaagg taaatcttta 420 ttgagtggtt tgcgcgacta taacccaatt gcagcctgtg tttgcaagct taccaatgaa 480 tcagacggtg tggtaacata tatatatggt attggttaca gaccattcat tataacaaac 540 cagcatttgt tctgtaggaa taatggctct ctccgtatca acacccatgc aggtgagttt 600 ttagttagca acacttgctc gctcaagatg ttcccaatac cagagcgtga tattattatt 660 atacgtttgc caaaagactt cgcgccgttt ccccaaagac tcaaattcag gccaacaaaa 720 attggagagc acgtgtgcct agttagctca aacttccaaa cacgtagcac ttctagcatc 780 atctctgaaa ctagtgccac ggcagggaca atgaacacaa atttcttcaa acattggatt 840 tcaactaagc aggggcagtg tggaaatcca cttgtgtcag tgacagatgg ttgtattgtt 900 ggaattcata gtatggcaag cacagtgagt tccatgaaca tgtacgcagg ttttccagaa 960 aagtttgtgg atatgtatct cgacaatgat tcactcgaat ggacgaaagg atggaagtta 1020 aacgttgatc gaagttgctg gagtggaatc aatcttgtga acaacaaagc tgaaggtttg 1080 ttcaagctaa cgaaagacat gttcacactc gatgataaca aatgggaatt ccaatctggc 1140 aataagaact ggatgtttga caagcttagt ggcaatttga aagcagtcgg tagaaccagt 1200 gggaatttag taacaaaaca ttcagtgaaa ggaaagtgca tgttatttca aacatatcta 1260 gcagttgaac cagaggaagc gagttatttc acaccattga tgggagctta ccaaaagagt 1320 gcattgaata aagatgcgta catcaaagat ttgtgtaagt attcaggacc gatccaagtc 1380 gggagtgtca attgtgaaat ttttgaatta gcatttagta aagtagtgaa gctactggag 1440 aagaatggat ttcataaatg tgcatacatc acaaacgaac acgagattct ggcggcattg 1500 aatatgaaag cagcagtggg tgcattatac tcaggaaaga agcgtgatta ctttaaggat 1560 tttacagacc aggacaaata cgagattgtc aaggctagtt gcgaacggtt atatcttggt 1620 aagatgggcg tgtggaacgg ttccttaaaa gctgagcttc gcacagcaga gaaggtggca 1680 gcgaataaaa caagatcatt cacagcagct cctcttgaca cattacttgg tgggaaagtt 1740 tgcgttgatg actttaataa ccagttctac agtcgacact ttgacctgcc gtggacagtt 1800 ggaatgagca aatttcgaaa gggctgggac acactcctaa ggaaactacc tgacaattgg 1860 atttattgcg atgcggatgg ttcacaattt gatagttcat tgtcaccata tctcataaat 1920 gccgtcctaa atcttcgttt gcattttatg gaagagtggg acgttggaga gaccatgctg 1980 cggaacttgt acacggaaat agtctacact ccaatcgcca caccggatgg caccatagta 2040 aagaaattca agggaaacaa tagtgggcag ccgtctacag tggtagacaa ttcactaatg 2100 gttgtattcg ccatgtatta cgctatggag atgagtgaaa ttgaaggaat acactccaag 2160 tgtgttttct ttgtgaatgg tgatgatctt ttgattgcga tagacctggg tctgaggcat 2220 tcttggatat actacgagag ttatttaatc aaccttggtc taaattacac attcgatagt 2280 cgcacacgga ataaggaacg cctctgtttc atgtcccatg ttggaatctt acaaaatgat 2340 atctatatac caaagttgga gaaagagaga attgtttcca tcttagagtg ggacagagca 2400 cagcaacctg agcatcggtt agaggcaatt tgcgccgcaa tgatagaagc atggggttat 2460 cccgacttat tagaccggat tcgaaagttc tattgctgga ttttagagca agccccatat 2520 agtga 2525 //