ID L20835; SV 2; linear; genomic RNA; STD; VRL; 2172 BP. XX AC L20835; XX DT 17-JUL-1993 (Rel. 36, Created) DT 08-JUL-2011 (Rel. 109, Last updated, Version 6) XX DE Soybean dwarf virus strain Y readthrough protein, coat protein, and DE movement protein genes, complete cds. XX KW . XX OS Soybean dwarf virus OC Viruses; Riboviria; Luteoviridae; Luteovirus. XX RN [1] RP 1-2172 RX DOI; 10.1007/BF01309758. RX PUBMED; 8240014. RA Smith O.P., Damsteegt V.D., Harris K.F., Vonder Haar R.; RT "Nucleotide sequence and E. coli expression of the coat protein gene of the RT yellowing strain of soybean dwarf luteovirus"; RL Arch. Virol. 133(1-2):223-231(1993). XX RN [2] RP 1-2172 RA Smith O.P.; RT ; RL Submitted (15-JUL-1993) to the INSDC. RL USDA-ARS, Fort Detrick, Bldg. 1301, Frederick, MD 21702, USA XX RN [3] RC Sequence update by submitter RP 1-2172 RA Smith O.P.; RT ; RL Submitted (06-JUL-2011) to the INSDC. RL Biology, Hood College, 401 Rosemont Ave, Frederick, MD 21701-8575, USA XX DR MD5; f1a353039991cf595846cd3e90829ad5. XX CC On Jul 7, 2011 this sequence version replaced gi:310362. XX FH Key Location/Qualifiers FH FT source 1..2172 FT /organism="Soybean dwarf virus" FT /strain="Y" FT /mol_type="genomic RNA" FT /db_xref="taxon:12049" FT CDS 4..2172 FT /codon_start=1 FT /transl_except=(pos:604..606,aa:OTHER) FT /product="readthrough protein" FT /note="ORF5" FT /db_xref="GOA:G1K0U2" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:G1K0U2" FT /protein_id="AEJ84486.1" FT /translation="MVAVSNVAIQRRRNRRAARRAPRVQLMAIPTATSRPQRRGRQRRR FT RRNNRGGSYISGGSGKAHTFVFSKDGINGSSKGSITFGPSLSECKPFSDGILKAYHEYK FT ITSVLLQFITEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTRAINGLE FT WHDTSEDQFKIHYKGNGESKIAGSFKITINVLTQNAKXVDGEPGPKPGPDPAPQPTPTP FT EPTPAKHERFIAYTGTLSTLISARQSSDSISLYSIRNQRIRYIEDENSSWANIDAKWYS FT QNSVEAIPMFVYPVPEGTWSIEISCEGYQAASTTSDPHRGKCDGMIAYDDDSSKVWNVG FT QQNNVTITNNKADNDWKYGHPDLTINGDRFDQNQVVEKDGIISFHLVTTGPNASFFLVA FT PAVKKTAKYNFCVSYGDWTDRDMEFGMVSVVLDEHLEGARSSQYIRKSPRPGHFGVNRS FT HRLQDSFTPVEYVSEDDSSSSSSIVSNRPSTPVSDSEVQFAESLKGKLPTQSKLPPKGF FT LSRLSVKEKEEISKSRPSNVENQVEPLVKAYGYPSQTGVYDAAREILQAKEAAENLAEL FT ERDLKEINRLEPPDIIVQEEIPDFVPPSEKVVQEDNREYIPPIWRNADQAVAVSSYEPP FT DWSQSAYESGYPSRKVGSLRGTLSKLGGSLKSGESSLRGSLRKTQDQSDLDYKLSKLNV FT LQRSQYQRILANLGKTRARAYIDGLDLS" FT CDS 4..606 FT /codon_start=1 FT /product="coat protein" FT /note="ORF3" FT /db_xref="GOA:Q08391" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q08391" FT /protein_id="AAA61934.1" FT /translation="MVAVSNVAIQRRRNRRAARRAPRVQLMAIPTATSRPQRRGRQRRR FT RRNNRGGSYISGGSGKAHTFVFSKDGINGSSKGSITFGPSLSECKPFSDGILKAYHEYK FT ITSVLLQFITEASSTSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTRAINGLE FT WHDTSEDQFKIHYKGNGESKIAGSFKITINVLTQNAK" FT CDS 20..589 FT /codon_start=1 FT /product="movement protein" FT /note="ORF4; 21 kDa ORF" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:Q08404" FT /protein_id="AAA61935.1" FT /translation="MSQYNDDAIVGQQDALHEFSSWLFQRPPADHNAEDDNDDEGEIIE FT EEAIFPEDQARLTHSCFQRTASMVVPREVSLSGRLYQNASHSLMEYSRPTMNIRSRVSY FT YSSSPRPLPPRQVPSLMNLTHTASTPKFNRYSINSVSQRAVRNVSQPELSMASNGMIPV FT KINSRSTIKGTESPRLQAPSRSRSMS" XX SQ Sequence 2172 BP; 673 A; 487 C; 497 G; 515 T; 0 other; agtatggtcg cggttagcaa tgtcgcaata caacgacgac gcaatcgtag ggcagcaaga 60 cgcgctccac gagttcagct catggctatt ccaacggcca ccagccgacc acaacgcaga 120 ggacgacaac gacgacgaag gagaaataat agaggaggaa gctatatttc cggaggatca 180 ggcaaggctc acacattcgt gttttcaaag gacggcatca atggtagttc caagggaagt 240 atcactttcg ggccgtcttt atcagaatgc aagccattct ctgatggaat actcaaggcc 300 taccatgaat ataagatcac gagtgtctta ttacagttca tcaccgaggc ctcttccacc 360 tcgtcaggtt ccatcgctta tgaacttgac ccacactgca agtactccga aattcaatcg 420 ctactcaata aattcagtat cacaaagagc ggttcgaaac gtttcccaac cagagctatc 480 aatggcctcg aatggcatga taccagtgaa gatcaattca agatccacta taaagggaac 540 ggagagtcca agattgcagg ctccttcaag atcacgatca atgtcctaac gcagaatgct 600 aaataggtag acggagaacc gggtccgaaa ccaggtccag acccagcacc ccaaccaaca 660 ccaacacctg aaccaacgcc agccaaacac gagagattta tcgcgtacac cggtacgttg 720 tctacactca ttagtgctag acagtcttcc gacagtattt ccttatattc catccggaat 780 cagaggatca gatacatcga agatgaaaat tccagttggg caaacataga tgcaaaatgg 840 tactcacaaa attctgttga ggccattcca atgtttgtat atccagtgcc tgaaggtact 900 tggtcaattg agatctcttg tgagggctac caggcagcgt ctacgacttc agacccgcat 960 cgtggaaaat gcgatggcat gattgcttac gacgacgatt catctaaggt gtggaatgtt 1020 ggccaacaga acaatgtaac cataaccaat aacaaggccg ataatgattg gaagtatggt 1080 catccagatc taacgatcaa tggtgacaga ttcgatcaaa atcaagtagt cgagaaagat 1140 ggaattatct cattccattt agtaactacc ggccccaatg caagtttctt tcttgtcgct 1200 ccagctgtga agaaaacagc taagtacaac ttttgtgttt cttacggaga ttggacagat 1260 agagatatgg aatttggtat ggtatcagta gtgcttgatg agcacttaga aggtgcaagg 1320 agttctcagt acattaggaa atcgccaaga ccaggtcatt ttggcgtcaa tcgttctcac 1380 cgattgcaag atagtttcac acctgtggaa tatgtcagtg aagatgatag tagtagtagt 1440 agtagtatag ttagtaatcg accatcaact ccggttagtg atagtgaagt ccaattcgca 1500 gaatcgctta agggaaagct cccaacacaa tcgaagcttc cacccaaagg gttcctatca 1560 cggttaagtg tcaaagaaaa agaagagatt tctaagtcaa ggccctcaaa tgttgaaaac 1620 caggttgaac ctctcgttaa agcttatgga tacccgtctc agacaggtgt ttatgatgcc 1680 gccagagaga tcttgcaagc taaagaagct gcagaaaact tggccgaatt agaaagggac 1740 ttaaaggaaa tcaacagact agaaccaccg gacataatag ttcaggaaga aatccctgac 1800 tttgtgccgc cctcggagaa ggttgttcag gaagataatc gtgaatacat acctccgatt 1860 tggcgtaatg ccgaccaggc tgtggcggtc tcatcatatg agcctccaga ctggagtcag 1920 tcagcttatg agtcaggtta tccttctagg aaagtaggct cactcagagg tactctctca 1980 aaattaggag ggtcgcttaa aagtggcgag tcttctctta gaggtagcct ccgcaagacg 2040 caagatcaaa gtgatctaga ctacaagttg tctaaactca atgtgttgca acgatcccaa 2100 tatcaacgga tcttggcaaa ccttgggaaa acgcgtgcgc gagcatacat cgatggttta 2160 gatttaagtt ag 2172 //