ID L14460; SV 1; circular; genomic DNA; STD; VRL; 2601 BP. XX AC L14460; XX DT 20-APR-1993 (Rel. 35, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Tomato mottle virus-[Florida] complete A component DNA; coat protein (AR1), DE replicative protein (AL1), transcriptional element (AL2), and AL3 genes, DE complete cds. XX KW . XX OS Tomato mottle virus-[Florida] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2601 RX PUBMED; 1469361. RA Abouzid A.M., Polston J.E., Hiebert E.; RT "The nucleotide sequence of tomato mottle virus, a new geminivirus isolated RT from tomatoes in Florida"; RL J. Gen. Virol. 73(Pt 12):3225-3229(1992). XX DR MD5; 484df044d85c7e34ce6ab9184f1986b6. DR EuropePMC; PMC110531; 9811744. DR EuropePMC; PMC2894479; 20596296. DR EuropePMC; PMC3485178; 23082767. DR EuropePMC; PMC4802622; 27000806. DR EuropePMC; PMC5904752; 29530481. XX FH Key Location/Qualifiers FH FT source 1..2601 FT /organism="Tomato mottle virus-[Florida]" FT /mol_type="genomic DNA" FT /note="A component" FT /db_xref="taxon:223359" FT CDS complement(join(1523..2601,1..7)) FT /codon_start=1 FT /gene="AL1" FT /product="replicative protein" FT /note="putative" FT /db_xref="GOA:Q06657" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/Swiss-Prot:Q06657" FT /protein_id="AAC32414.1" FT /translation="MPPPKKFRVQSKNYFLTYPQCSLSKEEALSQLQNLNTPVNKKFIK FT ICRELHENGEPHLHVLVQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGDFQIDGRSARGGQQSANDSYAKALNAGSVQSALAVLREEQPKDFVLQNH FT NIRSNLERIFAKAPEPWVPPFQVSSFTNVPDEMQEWADNYFGTGDAAPPDRPVSIIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNGRVFSNDVQYNVIDDIAPHYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGASYKEFLDKAENTGLKNWTIKNAIFITLT FT APLYQESTQASQETGNQKAQG" FT rep_origin 1..178 FT /standard_name="common region" FT /note="putative" FT CDS 325..1080 FT /codon_start=1 FT /gene="AR1" FT /product="coat protein" FT /db_xref="GOA:P36277" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/Swiss-Prot:P36277" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAC32415.1" FT /translation="MPKRDLPWRSMAGTSKVSRNANYSPRAGIGPRINKAAEWVNRPMY FT RKPRMYRTLRTTDVARGCEGPCKVQSFEQRHDISHIGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDIWTVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(1077..1475) FT /codon_start=1 FT /gene="AL3" FT /function="unknown" FT /db_xref="GOA:Q06659" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/Swiss-Prot:Q06659" FT /protein_id="AAC32416.1" FT /translation="MDSRTGELITAHQAENGVYIWELENPLYFKIHRVEDPLYTRTRVY FT HVQIRFNHNLRKALHLHKAYLNFQVWTTSMTASGSIYLARFRYLVNMYLDQLGVISINN FT VVRAVRFATNRVYVNHVLENHSIKFKFY" FT CDS complement(1222..1611) FT /codon_start=1 FT /gene="AL2" FT /function="transcriptional element" FT /note="putative" FT /db_xref="GOA:Q06658" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/Swiss-Prot:Q06658" FT /protein_id="AAC32417.1" FT /translation="MRSSSPSQPPSIKRAHRQAKKRAIRRRRVDLQCGCSIYFHLGCAG FT HGFTHRGTHHCTSGGEWRVYLGARKSPLFQDTQSRGPTVYQNEGIPRTDTVQPQPEESV FT ASPQSLPELPSLDDVDDSFWINLFS" XX SQ Sequence 2601 BP; 668 A; 565 C; 593 G; 775 T; 0 other; ggggcatttt tgtaataaga agaggtactc cagatgagtt actccatttg agccttctca 60 aacttgctca ttcaattgga gtattagagt aacttatata taagaaccct ctatagaact 120 attaatctgg ttcatacacg tggcggccat ccgatataat attaccggat ggccgcgcga 180 tttttttaat ccgtacagtc caactctctc tcgtccaatc atattgcgtc gtacaagcct 240 atatatttcc aacaacttgg gccttaagtt gttggaggcc cattataaat taaagtgatc 300 ttggcccaat gtctttaact caaaatgcct aagcgtgatt tgccatggcg atcgatggcg 360 ggaacctcaa aggttagccg caatgctaat tattctcccc gtgcaggtat tgggccaaga 420 attaacaagg ccgctgaatg ggtgaaccgg cccatgtaca ggaagcccag gatgtatcgg 480 actcttagga caactgacgt cgccaggggc tgtgaaggcc catgtaaggt ccagtctttc 540 gaacagcgcc atgacatctc acatatcggt aaggtcatgt gcatatccga tgtgactcgt 600 ggtaatggca taacccaccg tgttggtaag cgtttctgtg ttaagtctgt gtatatcctt 660 ggtaagattt ggatggatga gaacatcaag ctgaagaacc acacgaacag tgtcatgttc 720 tggttggtaa gagatcgtag accctatggt actccaatgg acatttggac agtgttcaac 780 atgttcgaca acgagcctag cactgctact gtcaaaaacg atctacgcga tcgttaccag 840 gtcatgcata agttctatgg caaggtgaca ggtggacagt atgccagcaa cgagcaggct 900 atagttaaga ggttctggaa ggtcaacaat catgtagtct ataatcatca agaggctggc 960 aagtacgaga atcacacaga gaacgccttg ttattgtata tggcatgcac tcatgcgtct 1020 aaccctgtat atgcaacttt gaaaattcga atctattttt atgattcgat cacgaattaa 1080 taaaatttga attttattga atgattctcc aatacatgat ttacatacac tctgtttgtt 1140 gcgaaacgta cagctctaac tacattgttt attgaaataa cacctaattg atctagatac 1200 atgttgacta aatatctaaa tctagctaaa taaattgatc cagaagctgt catcgacgtc 1260 gtccaaactt ggaagttcag gtaggctttg tggagatgca acgctttcct caggttgtgg 1320 ttgaaccgta tctgtacgtg gtataccctc gttctggtat acagtgggtc ctctactctg 1380 tgtatcttga aataaagggg attttctagc tcccagatat acacgccatt ctccgcctga 1440 tgtgcagtga tgagttcccc tgtgcgtgaa tccatgtccc gcacagccta agtggaagta 1500 gatggagcac ccgcactgta gatcaaccct gcgccttctg attgcccgtt tcttggcttg 1560 cctgtgtgct ctcttgatag aggggggctg tgagggtgat gaagatcgca ttcttgatag 1620 tccagttctt gagacctgta ttttctgctt tgtctaagaa ctctttatag ctggcaccct 1680 caccaggatt gcaaagcacg attgctggga ttccgccttt aatttgaact ggcttaccgt 1740 acttgcaatt tgattgccaa tctttctggg cccccagcaa ttctttccag tgctttagct 1800 ttagataatg cggtgcgatg tcatcaatga cgttatactg cacatcattc gagaagactc 1860 gaccattgaa gtctaggtgt ccactgagat agttatgtgg gcctaacgca cgcgcccaca 1920 tcgtcttccc tgttcttgaa tcaccctcga cgatgatact tacaggtcta tccggcggcg 1980 cagcgtcacc cgtcccgaaa taattatccg cccattcctg catctcgtca ggaacgttag 2040 tgaaagaaga gacttgaaat ggaggaaccc acggttccgg agcctttgcg aatattcgtt 2100 ctaggttaga gcggatgtta tgattttgta atacaaaatc ttttggttgt tcttccctta 2160 gaaccgctaa ggcagattga accgaacctg catttaatgc tttcgcatat gaatcattag 2220 cagactgctg gcctcctctg gcagatctgc cgtcgatttg gaaatctccc cattcgattg 2280 tatctccgtc cttgtcgatg tatgatttga cgtcggagct cgatttagct ccctgaatat 2340 tcggatggaa atgtgctgac cgggttgggg agaccaggtc gaagaatctg ttattcgtgc 2400 attggtactt accttcgaac tgaacaagca catggagatg aggttcccca ttttcatgaa 2460 gctctctgca aattttgatg aatttcttgt tgactggggt atttaggttt tgtaattggg 2520 aaagtgcttc ttctttagat agagagcact ggggataagt taggaaatag ttctttgact 2580 gaactctaaa tttctttggt g 2601 //