ID L12396; SV 1; linear; genomic RNA; STD; VRL; 2981 BP. XX AC L12396; XX DT 15-MAR-1993 (Rel. 35, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Turnip mosaic virus polyprotein (including nuclear inclusion a and b DE proteins and core protein) gene, 3' end. XX KW coat protein; core protein; nuclear inclusion a protein; KW nuclear inclusion b protein. XX OS Turnip mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-2981 RA Park Y., Suh S., Park H., Lee H., Nam H.; RT "The nucleotide sequence of nuclear inclusion protein gene and coat protein RT gene of turnip mosaic virus"; RL Unpublished. XX DR MD5; ee6004233a8872a34529f3ff67a39933. XX FH Key Location/Qualifiers FH FT source 1..2981 FT /organism="Turnip mosaic virus" FT /mol_type="genomic RNA" FT /tissue_lib="pBluescriptSK(-)" FT /db_xref="taxon:12230" FT mat_peptide <1..354 FT /gene="NIa" FT /product="nuclear inclusion A protein" FT /function="protease (protein hydrolase) activity of the FT polyprotein" FT /note="putative" FT mat_peptide 355..1905 FT /gene="NIb" FT /product="nuclear Inclusion b protein" FT /function="RNA dependent RNA polymerase, RNA replicase" FT /note="putative" FT mat_peptide 1906..2769 FT /standard_name="coat protein" FT /product="core protein" FT /function="protection of viral genome" FT /note="putative" FT 3'UTR 2770..2981 FT /note="putative" XX SQ Sequence 2981 BP; 931 A; 599 C; 752 G; 699 T; 0 other; tctgagacta gcacaataat gccagttgaa aacagtcagt tttggaaaca ctggattagt 60 acgaaagacg gccaatgcgg aagtccaatg gtgagcacga aagacgggaa aatacttgga 120 ttacacagcc tagcaaactt ccagaactcc atcaattact ttgctgcttt cccagatgac 180 tttgccgaga agtatcttca taccattgaa gcacacgagt gggtcaagca ttggaaatat 240 aacactagtg ccatcagctg gggctctttg aatatacaag catcgcaacc gtcgggtttg 300 ttcaaagtaa gcaaactaat ctcagacctc gacagcacgg cagtctacgc acaaacccag 360 cagaatcggt ggatgtttga acagcttaat gggaacctga aagcgatagc acactgccct 420 agccagcttg tgacaaagca cacagttaaa ggaaaatgtc aaatgtttga cttgtatctc 480 aagttgcatg atgaagcacg agagtatttc caaccgatgc tgggccagta tcaaaagagt 540 aaactcaatc gagaagcata tgcaaaggat cttctgaaat atgcaacgcc aattgaagca 600 ggaaacatcg actgtgatct gtttgaaaag acagttgaaa tagtcgtatc agatctgcga 660 ggttatggtt tcgaaacatg caattatgtc actgatgaga atgacatatt tgaagccctt 720 aacatgaaat ccgcagttgg agcgttgtat aaaggaaaga agaaggacta cttcgctgag 780 ttcacacccg agatgaaaga agaaatactg aaacaaagtt gtgaacggct cttcttagga 840 aagatgggag tgtggaacgg ctcgttgaag gcagagttac gaccactgga aaaagtggaa 900 gcaaacaaaa cacggacgtt cactgccgca ccactagaca cactattggg tggaaaggtt 960 tgcgtggatg atttcaacaa ccagttctat gatcacaacc ttagagctcc ttggagcgtt 1020 ggcatgacaa agttttattg tggttgggat cgcttgttgg agtcgttgcc agatggttgg 1080 gtgtattgcg atgctgatgg ctcacagttt gacagctcgc tatcaccata cttaatcaat 1140 gcagtactca acatccgctt aggattcatg gaagagtggg acgtagggga ggtaatgctg 1200 agaaatttgt acaccgaaat cgtgtatacc cctatctcta caccagatgg cacactcgta 1260 aagaaattca aaggaaacaa tagcggacag ccatcgactg ttgtagacaa cacactcatg 1320 gtcatactgg cagtcaacta ctcactcaag aaaagtggga ttccaagtga gctgcgcagc 1380 acgattatca gattcttcgt caacggagat gatttattgc taagcgtaca cccagagtat 1440 gagtatatcc ttgacactat ggcagacaac ttccgtgagc tgggcctgaa gtacactttc 1500 gactcaagga ctagggaaaa aggagacctt tggtttatgt cgcaccaagg gcacaaaaga 1560 gagggaatct ggattcccaa gcttgagcca gagcgaatag tatcgattct agaatgggat 1620 cggtcgaaag agccatgcca tcgactagag gcaatctgcg cagcgatgat tgagtcgtgg 1680 ggatacgaca agttaactca cgagatacgc aagttttacg cgtggatgat tgaacaagct 1740 ccatttagct ccctagcaca agaaggaaaa gctccttaca tagcggaaac ggcactgaga 1800 aagctctacc ttgataagga accagctcaa gaggatctca cccattattt gcaagcaatc 1860 tttgaggatt atgaagatgg tgttgaggct tgtgtttatc accaggcagg tgagacgctt 1920 gatgcaggtc tgacagacga gcaaaagcag gcggagaagg agaagaagga tagagagaag 1980 gcagaaaagg aacgagagaa gcagaagcag ttggcactca agaaaggcaa ggatgttgcg 2040 caagaagagg gaaaacgcga caaggaggta aacgctggaa cctctggaac tttcagtgta 2100 cccagactta agagtctgac aagcaagatg cgcgtgccaa gatatgagaa aagagtggct 2160 ctaaacctcg atcatctaat cctatacaca ccagagcaga cggatctgtc caacacgcgt 2220 tcaacgcgaa agcagtttga cacatggttt gaaggtgtaa tggctgatta cgaactgacg 2280 gaggataaaa tgcaaatcgt tctcaatggt ttaatggtct ggtgcattga gaacggaacc 2340 tccccgaaca taaacggaat gtgggtgatg atggacggcg atgatcaggt ggaattcccg 2400 atcaagccgc tcattgacca cgccaaaccc acatttaggc agataatggc ccatttcagt 2460 gacgtagctg aagcgtacat tgaaaagcgt aaccaagacc gaccatacat gccacgatat 2520 ggtcttcagc gcaatttaac cgacatgagc ttagctcgat atgcgtttga tttctatgaa 2580 atgacttcta gaactccaat acgtgcgaga gaagcacaca tccagatgaa agcagcagca 2640 ctgcgtggcg caaataacaa tttgttcggc ttggatggaa acgttggtac aacggtagag 2700 aacacggaga ggcatacgac cgaggacgtt aatcggaaca tgcataactt acttggcgtt 2760 aaggggttat gaagttgtat gctggtagac tatttgtatt taagtttact cgttagtatt 2820 ctcgcttatg ggaaatatgt aagtttgtta aagcagccag tgtgactttg tcatgtgtgt 2880 tgttgttact ttctatattt tcgccgaaca ttttattggt gttagcgcat gtggtgagga 2940 tcgtcctcga ttgccttaac atttgatagg atgcaaggga c 2981 //