ID L07940; SV 1; linear; genomic RNA; STD; VRL; 2299 BP. XX AC L07940; XX DT 07-JAN-1993 (Rel. 34, Created) DT 25-SEP-2007 (Rel. 93, Last updated, Version 6) XX DE Rice hoja blanca virus nonstructural protein 3 and nucleoprotein genes, DE complete cds. XX KW N gene; nucleoprotein; NS3-glycoprotein; ribonucleoprotein; KW nonstructural protein NS3. XX OS Tenuivirus oryzalbae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2299 RX PUBMED; 8046420. RA de Miranda J., Hernandez M., Hull R., Espinoza A.M.; RT "Sequence analysis of rice hoja blanca virus RNA 3"; RL J. Gen. Virol. 75(Pt 8):2127-2132(1994). XX DR MD5; 6a9904e9b00bb8f45cd38f61b3194b84. XX FH Key Location/Qualifiers FH FT source 1..2299 FT /organism="Tenuivirus oryzalbae" FT /strain="Costa Rica" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052764" FT misc_structure 1..20 FT CDS 96..707 FT /codon_start=1 FT /product="nonstructural protein 3" FT /note="NS-3; putative" FT /db_xref="GOA:Q67897" FT /db_xref="InterPro:IPR007974" FT /db_xref="PDB:3AJF" FT /db_xref="UniProtKB/Swiss-Prot:Q67897" FT /func_characterised="identical sequence" FT /protein_id="AAA53423.1" FT /translation="MNVSLYYSGTPVSSHSLLSKNGLSNIVLTCKDLPIPIDLLSLFFD FT ILNERHPSFDEHMFLQMIRKPDDPENLSVFLKSAIWMLSHKRDLPGHYRLPLTCLVSTY FT SEYFVELKPRQPSTKCWFCKIAKDGLPFRVEGVHGFPSEAELYIVPSKEHAIESFEVLS FT GKKLYRSPSKKKHGYLIASNKPPLTSKYVEYDPSKPDTKP" FT stem_loop 708..1224 FT repeat_region 940..956 FT repeat_region 1150..1166 FT CDS complement(1225..2184) FT /codon_start=1 FT /product="nucleoprotein" FT /function="ribonucleoprotein" FT /note="N-protein" FT /db_xref="GOA:Q67898" FT /db_xref="InterPro:IPR008864" FT /db_xref="InterPro:IPR009522" FT /db_xref="UniProtKB/TrEMBL:Q67898" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="AAA53424.1" FT /translation="MTMSVADVQTEIERVTTLALKYITDHKDTLVTFVGQIEYNGYDAG FT KLLQILKRKAEGRDFGKDLCYLLVMRYTRGTGFVRDVRKKIKTAAGGDTAHEIVTHYGV FT VQSVGDNADAITLGRLASLFPAVSMNIVRNVSTGAKLAVDSSDLGSSGLDLLLWDFVPQ FT FITLDSLTAPYCTGKGMNTILFSLHVLHGALTTKKTMPDQKKKARSLVTDFELVKYTTE FT LLVITCNAKNLKVEKKTIYRESLMRPFQEGAGDALGFKETFWTSLAKVSTGCVRKMKKD FT AQAYLSERTPLLKVFVENCNKSEDEVAEAIKSYFVTGA" FT misc_structure 2279..2299 XX SQ Sequence 2299 BP; 667 A; 510 C; 410 G; 712 T; 0 other; acacaaagtc ctgggtataa aaaaacaaac aaagatataa gaagagaaaa actttagtga 60 cttgatatct aattacagga atcatatagt acaagatgaa cgtgtccttg tactacagcg 120 ggactcctgt ctctagtcat agcttgctca gcaagaatgg tctgtcaaac attgttttga 180 cttgtaagga tctacccata cccattgatc tcttgtctct tttctttgat atcctcaatg 240 aacgacaccc aagcttcgat gaacacatgt ttttacaaat gattaggaag ccagatgatc 300 ctgagaattt gtctgttttc ttgaagagtg cgatatggat gctctctcac aagagagatt 360 tgccagggca ttacagactg cctctgactt gtttggtttc aacatatagt gagtattttg 420 ttgaactaaa gcctcggcag ccatcaacaa aatgctggtt ttgtaagata gccaaggatg 480 gattgccttt tagagtcgaa ggtgtccatg gcttcccgtc agaagcagag ctatacattg 540 tcccttcaaa agagcatgca atcgagagct ttgaagtgct cagcgggaag aagttataca 600 gatctcctag caagaagaaa catggatatt tgatagcttc aaataagcca ccactgactt 660 ccaaatatgt cgagtatgac cccagcaaac ccgatactaa accatgaatg cactcattac 720 tgcttccact ttaggcttgg tctactctcc atggttgtga acctaacaga gccttcaact 780 ctctgagatt ctctcatctc gaacaaaaac aaataggcta agcctatttt ctcttaaaaa 840 tagtatctgt gctaagcaca gcatccggat attgtttcgg atggttttta cctaacctaa 900 tttttttgga tttttgttta ttttttgatt tttttgatta tttacatatt tacaagattt 960 ttcatggttt tttcattttt ttagttttgt tttccttgat atacactcaa atagcaagta 1020 catggttaat ttactttcaa ggcatagcac actcaacaca cataataatg atatatagga 1080 caagatacta atttaaacaa caatatagaa tatagaactt aaaagctaat gagattcata 1140 catatgataa tttacatatt tacaaccaat ctgatttctc atcctttcca gcttcatcta 1200 ccatctcaat ctgaactctc cattttatgc cccagtgaca aagtagcttt tgatcgcctc 1260 agcaacctca tcctcactct tgttgcagtt ctccacaaat actttcagta gaggagttct 1320 ctctgacaaa tatgcttgtg catctttttt catctttctg acacaccccg tggagacctt 1380 tgctagagag gtccagaaag tctctttgaa tccaagagca tctccagcgc cttcttggaa 1440 aggcctcatc aaagactctc tataaattgt cttcttctct accttgagat tcttggcatt 1500 acaagtgatg accaataatt cagttgtata tttcaccaac tcaaaatcag tcacaaggct 1560 tctagccttc ttcttctgat caggcatggt cttcttagtg gttagagcac catgcaagac 1620 atgcaaggag aagagaattg tgttcatgcc ttttcctgtg cagtaagggg cagtcagaga 1680 gtccagagtg ataaactgag gaacaaagtc ccagaggagg aggtctaagc ctgatgaccc 1740 taaatctgaa gagtcaaccg ctagcttggc tccagttgat acattcctca ctatgttcat 1800 tgacacagca gggaacagtg acgcaagtct gcctagagtt atagcatcag cattatctcc 1860 aacagattgc acaactccat aatgtgtcac tatctcatgt gcagtgtcac ctccagctgc 1920 tgtcttgatc ttctttctaa catctctgac aaacccagta cccctggtgt atctcatcac 1980 caagagataa cagagatcct ttccaaaatc tctcccttca gcctttctct tcaagatctg 2040 gaggagcttg cctgcatcat agccattgta ctctatctga ccaacaaaag tcactagcgt 2100 gtccttgtga tcagttatgt acttgagggc tagtgtagtg accctctcaa tctcagtctg 2160 aacatcagca actgacatcg tcattgttgc aaccacagtt atgtcttcac gaatgggggc 2220 aattgtaaga tttatcagaa gtacgtttca gaaaacactc ttgcttgatg atctttacaa 2280 tgctacccag actttgtgt 2299 //