ID L02971; SV 1; linear; genomic RNA; STD; VRL; 7339 BP. XX AC L02971; XX DT 03-NOV-1992 (Rel. 33, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 4) XX DE Echovirus 22 1AB, 1C, 1D, 2A, 2B, 2C, 3A, 3B, 3C, 3D proteins RNA, complete DE mature peptides and cds. XX KW 1AB protein; 1C protein; 1D protein; 2A gene; 2B gene; 2C gene; 3A gene; KW 3B gene; 3C gene; 3D gene. XX OS Human parechovirus 1 OC Viruses; Riboviria; Picornavirales; Picornaviridae; Parechovirus. XX RN [1] RP 1-7339 RX DOI; 10.1073/pnas.89.18.8847. RX PUBMED; 1528901. RA Hyypia T., Horsnell C., Maaronen M., Khan M., Kalkkinen N., Auvinen P., RA Kinnunen L., Stanway G.; RT "A distinct picornavirus group identified by sequence analysis"; RL Proc. Natl. Acad. Sci. U.S.A. 89(18):8847-8851(1992). XX DR MD5; c9827f9afabcb8d0d142d8826ad716d8. DR EuropePMC; PMC110230; 9733894. DR EuropePMC; PMC114071; 11160660. DR EuropePMC; PMC115046; 11483747. DR EuropePMC; PMC1933019; 17460053. DR EuropePMC; PMC2224395; 17942560. DR EuropePMC; PMC2792847; 17553229. DR EuropePMC; PMC2812307; 19864477. DR EuropePMC; PMC2916555; 20519478. DR EuropePMC; PMC3486295; 23043176. DR EuropePMC; PMC3700866; 23844186. DR EuropePMC; PMC3827037; 24265685. DR EuropePMC; PMC3950689; 24335283. DR EuropePMC; PMC4306844; 25609308. DR EuropePMC; PMC4380134; 25646764. DR EuropePMC; PMC4542383; 26157123. DR EuropePMC; PMC5323622; 28232443. DR EuropePMC; PMC5511752; 14596594. DR RFAM; RF00210; IRES_Aptho. DR RFAM; RF00499; Parecho_CRE. XX FH Key Location/Qualifiers FH FT source 1..7339 FT /organism="Human parechovirus 1" FT /strain="Harris" FT /mol_type="genomic RNA" FT /db_xref="taxon:12063" FT 5'UTR 1..709 FT CDS 710..7252 FT /codon_start=1 FT /db_xref="GOA:Q66578" FT /db_xref="InterPro:IPR000199" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001676" FT /db_xref="InterPro:IPR004004" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR009407" FT /db_xref="InterPro:IPR009419" FT /db_xref="InterPro:IPR014759" FT /db_xref="InterPro:IPR027417" FT /db_xref="InterPro:IPR029053" FT /db_xref="InterPro:IPR033703" FT /db_xref="PDB:4UDF" FT /db_xref="PDB:4Z92" FT /db_xref="PDB:5MJV" FT /db_xref="UniProtKB/Swiss-Prot:Q66578" FT /protein_id="AAA72291.1" FT /translation="METIKSIADMATGVVSSVDSTINAVNEKVESVGNEIGGNLLTKVA FT DDASNILGPNCFATTAEPENKNVVQATTTVNTTNLTQHPSAPTMPFSPDFSNVDNFHSM FT AYDITTGDKNPSKLVRLETHEWTPSWARGYQITHVELPKVFWDHQDKPAYGQSRYFAAV FT RCGFHFQVQVNVNQGTAGSALVVYEPKPVVTYDSKLEFGAFTNLPHVLMNLAETTQADL FT CIPYVADTNYVKTDSSDLGQLKVYVWTPLSIPTGSANQVDVTILGSLLQLDFQNPRVFA FT QDVNIYDNAPNGKKKNWKKIMTMSTKYKWTRTKIDIAEGPGSMNMANVLCTTGAQSVAL FT VGERAFYDPRTAGSKSRFDDLVKIAQLFSVMADSTTPSENHGVDAKGYFKWSATTAPQS FT IVHRNIVYLRLFPNLNVFVNSYSYFRGSLVLRLSVYASTFNRGRLRMGFFPNATTDSTS FT TLDNAIYTICDIGSDNSFEITIPYSFSTWMRKTNGHPIGLFQIEVLNRLTYNSSSPSEV FT YCIVQGKMGQDARFFCPTGSVVTFQNSWGSQMDLTDPLCIEDDTENCKQTMSPNELGLT FT SAQDDGPLGQEKPNYFLNFRSMNVDIFTVSHTKVDNLFGRAWFFMEHTFTNEGQWRVPL FT EFPKQGHGSLSLLFAYFTGELNIHVLFLSERGFLRVAHTYDTSNDRVNFLSSNGVITVP FT AGEQMTLSAPYYSNKPLRTVRDNNSLGYLMCKPFLTGTSTGKIEVYLSLRCPNFFFPLP FT APKVTSSRALRGDMANLTNQSPYGQQPQNRMMKLAYLDRGFYKHYGIIVGDHVYQLDSD FT DIFKTALTGKAKFTKTKLTSDWVIEEECELDYFRIKYLESAVDSEHIFSVDKNCETIAK FT DIFGTHTLSQHQAIGLVGTILLTAGLMSTIKTPVNAVTIKEFFNHAIDGDEQGLSLLVQ FT KCTTFFSSAATEILDNDLVKFIVKILVRILCYMVLYCHKPNILTTACLSTLLIMDVTSS FT SVLSPSCKALMQCLMDGDVKKLAEIVAESMSNTDDDEVKEQICDTVKYTKTILSNQGPF FT KGFNEVSTAFRHIDWWIHTLLKIKDMVLSVFKPSIESKAIQWLERNKEHVCSILDYASD FT IIVESKDQSKMKTQDFYQRYSDCLAKFKPIMAICFRSCHNSISNTVYRLFQELARIPNR FT ISTNNDLIRIEPIGIWIQGEPGQGKSFLTHTLSRQLQKSCKLNGVFTNPTASEFMDGYD FT NQDIHLIDDLGQTRKEKDIEMLCNCISSVPFIVPMAHLEEKGKFYTSKLVVATTNKSDF FT SSTVLQDSGALKRRFPYIMHIRAAKAYSKAGKLNVSQAMATMSTGECWEVSKNGRDWET FT LKLKDLVDKITIDYNERVKNYNAWKQQLENQTLDDLDDAVSYIKHNFPDAIPYVDEYLN FT IEMSTLIEQMEAFIEPKPSVFKCFANKIGSKISKASREVVDWFSDKIKSMLSFVERNKA FT WLTVVSAVTSAISILLLVTKIFKKEESKDERAYNPTLPVAKPKGTFPVSQREFKNEAPY FT DGQLEHIISQMAYITGSTTGHMTHCAGYQHDEIILHGHSIKYLEQEDELTLHYKNKVFP FT IEQPSVTQVTLGGKPMDLAILKCKLPFRFKKNSKYYTNKIGTESMLIWMTEQGIITKEV FT QRVHHSGGIKTREGTESTKTISYTVKSCKGMCGGLLISKVEGNFKILGMHIAGNGEMGV FT AIPFNFLKNDMSDQGIVTEITPIQPMYINTKTQIHKSPVYGAVEVKMGPAVLSKSDTRL FT EEPVECLIKKSASKYRVNKFQVNNELWQGVKACVKSKFREIFGMNGIVDMKTAILGTSH FT VNSMDLSTSAGYSFVKSGYKKKDLICLEPFSVAPLLERLVQDKFHNLLKGNQITTTFNT FT CLKDELRKLDKIASGKTRCIEACEVDYCIVYRMIMMEIYDKIYQTPCYYSGLAVGINPY FT KDWHFMINALNDYNYEMDYSQYDGSLSSMLLWEAVEVLAYCHDSPDLVMQLHKPVIDSD FT HVVFNERWLIHGGMPSGSPCTTVLNSLCNLMMCIYTTNLISPGIDCLPIVYGDDVILSL FT DKEIEPEKLQSIMADSFGAEVTGSRKDEPPSLKPRMEVEFLKRKPGYFPESTFIVGKLD FT TENMIQHLMWMKNFSTFKQQLQSYLMELCLHGKDTYQHYIKILEPYLQEWNITVDDYDV FT VITKLMPMVFD" FT mat_peptide 710..1576 FT /standard_name="VP0" FT /product="1AB protein" FT mat_peptide 1577..2335 FT /standard_name="VP3" FT /product="1C protein" FT /note="putative" FT mat_peptide 2336..3037 FT /standard_name="VP1" FT /product="1D protein" FT mat_peptide 3038..3478 FT /product="2A protein" FT mat_peptide 3479..3844 FT /product="2B protein" FT mat_peptide 3845..4831 FT /product="2C protein" FT mat_peptide 4832..5182 FT /product="3A protein" FT mat_peptide 5183..5242 FT /standard_name="VPg" FT /product="3B protein" FT mat_peptide 5243..5842 FT /product="3C protein" FT mat_peptide 5843..7249 FT /product="3D protein" FT 3'UTR 7250..7339 XX SQ Sequence 7339 BP; 2341 A; 1380 C; 1487 G; 2131 T; 0 other; tttgaaaggg gtctcctaga gagcttgcct agggccttat aacccgactt gctgagcttc 60 tataggaaaa aaccctttcc cagccttggg gtggctggtc aataaaaacc cccatagtaa 120 ccaacaccta agacaatttg atcaacccta tgcctggtcc ccactattcg aaggcaactt 180 gcaataagaa gagtggaaca aggatgctta aagcatagtg taaatgatct tttctaacct 240 gtattatgta cagggtggca gatggcgtgc cataaatcta ttagtgggat accacgcttg 300 tggaccttat gcccacacag ccatcctcta gtaagtttgt aaaatgtctg gtgagatgtg 360 ggaacttatt ggaaacaaca atttgcttaa tagcatccta gtgccagcgg aacaacatct 420 ggtaacagat gcctctgggg ccaaaagcca aggtttgaca gacccattag gattggtttc 480 aaaacctgaa ttgttgtgga agatattcag tacctatcaa tctggtagtg gtgcaaacac 540 tagttgtaag gcccacgaag gatgcccaga aggtacccgc aggtaacaag agacactgtg 600 gatctgatct ggggccaact acctctatca ggtgagttag ttaaaaaacg tctagtgggc 660 caaacccagg ggggatccct ggtttccttt tattgttaat attgacatta tggagacaat 720 taagagtatt gcagatatgg ctactggtgt tgtaagttct gttgattcta ccatcaatgc 780 agtcaatgaa aaggtagaaa gcgtcggtaa tgaaattgga ggtaatttgt taactaaagt 840 agctgatgat gcttccaata tcctaggacc aaattgtttt gcaacgactg ctgaaccaga 900 gaacaagaat gtagttcaag ccactactac tgttaatact accaacttga ctcaacatcc 960 atcggcacct acgatgccct tttcaccaga tttctccaat gtcgacaatt ttcactctat 1020 ggcttatgac atcacaactg gggacaaaaa tcccagtaaa ttggttcgtc ttgaaaccca 1080 tgagtggacg ccatcttggg caagaggata ccagattaca catgtagaat tacctaaagt 1140 tttttgggat caccaagaca agcccgcata tggacaatca cgctactttg cggctgtaag 1200 atgtggcttt cactttcaag tacaagttaa tgtgaatcaa ggtactgcag gcagtgcctt 1260 ggtagtatat gaacctaaac cagttgtcac ttatgattca aaactggaat ttggagcctt 1320 tacaaatctt ccacatgttt tgatgaattt ggctgaaacc acacaggctg acttatgtat 1380 cccctatgtt gctgacacaa actatgtcaa gaccgattcg tcagacttag ggcagttaaa 1440 agtctatgtc tggactccat tgtcaatccc cactggatct gctaaccaag ttgatgtcac 1500 catactgggt agcttgttgc aattagactt ccaaaatcca agggtatttg ctcaagatgt 1560 caacatatat gataatgcac caaatggtaa aaagaaaaat tggaagaaaa ttatgaccat 1620 gagcacaaaa tacaaatgga ccagaacaaa aatcgatata gcagaaggtc ctggttcaat 1680 gaacatggca aatgtccttt gtacaactgg tgctcaatca gtggctttag taggtgaaag 1740 agctttctat gatcctagaa ctgcaggcag taaatcaaga tttgatgatc ttgttaagat 1800 agcccagtta ttctcagtga tggcagattc aaccactcca tcagaaaatc atggagttga 1860 tgcaaaagga tatttcaagt ggtcagcaac aacagccccc cagagtattg tccacagaaa 1920 tattgtctac ttaagactat ttccaaattt gaatgttttt gttaacagtt attcatactt 1980 taggggttca ttagttttaa gattgagcgt ctacgccagt actttcaata gaggtcgatt 2040 gaggatgggc ttcttcccca atgccacaac ggactcaact tccaccttgg acaatgctat 2100 atacacaata tgtgatatag gtagtgacaa tagttttgaa attacaatcc cttactcttt 2160 ttccacttgg atgaggaaaa caaatggcca cccaattgga ttgtttcaaa ttgaagtctt 2220 aaacaggctc acatacaaca gttctagtcc atcggaggtt tattgtatag tccaaggtaa 2280 aatgggacaa gatgccaggt tcttctgccc aactggttct gttgttacat tccagaattc 2340 atggggttca cagatggatt taaccgaccc tctttgtatt gaagatgaca cagaaaattg 2400 caaacaaaca atgtctccaa atgaactagg actcacttca gcccaagatg atggcccact 2460 tggtcaagaa aagccaaatt attttctcaa ttttaggtcg atgaatgtgg acatttttac 2520 tgtatcacat actaaagtag ataacctatt tgggcgggca tggtttttta tggagcatac 2580 tttcaccaat gagggacaat ggagagtgcc attggaattt ccaaaacaag gtcatgggtc 2640 cttatcactg ttgtttgctt attttactgg tgaactgaat atccatgttc tgttcctaag 2700 tgagaggggg tttctgaggg ttgcacacac atatgacact agtaatgatc gagtcaattt 2760 tctgtcatcg aacggtgtaa taactgtacc agccggagag cagatgacac tttcagctcc 2820 ctactattca aacaaaccat taagaactgt cagagataac aatagtcttg gttatttgat 2880 gtgcaagccc ttcttgactg gaacctctac tggtaaaatt gaggtttatc ttagcctgag 2940 atgtccaaat ttctttttcc ctcttcctgc ccctaaggtt acgagtagtc gtgcactacg 3000 gggtgatatg gcaaacctta caaatcagag tccatatggt caacaaccac agaatcgtat 3060 gatgaaacta gcatatttag atagaggttt ctacaaacat tatggcatta tagttggaga 3120 ccatgtgtac caactagatt cagatgacat tttcaagaca gcattgacag gaaaagccaa 3180 atttactaaa actaagttga cttcagattg ggttattgaa gaagagtgtg aattagacta 3240 ctttagaatc aaatatcttg aatcagctgt ggattcagag cacatttttt cagtagacaa 3300 aaactgtgaa accattgcca aggatatttt tggaacccat acactaagcc aacatcaagc 3360 aatagggtta gtgggaacca ttttattgac tgctggcctt atgtcaacta taaaaacccc 3420 agttaatgct gtgacaataa aagaattctt taatcatgcc atagatggcg atgagcaagg 3480 tctttccttg cttgtacaaa aatgtactac attcttttct tctgctgcaa ctgagatttt 3540 ggataatgat ttagtcaagt tcatagtgaa aatcctggtg agaatacttt gctacatggt 3600 actttattgc cataaaccta acattttgac tactgcttgc ttatccactc ttttaataat 3660 ggatgttact tcctcttcag tgctgtcacc ttcttgtaaa gccttgatgc agtgtctgat 3720 ggatggtgat gttaagaaac tggctgaaat tgtggcagaa tcaatgtcca acactgatga 3780 tgatgaagtt aaggagcaaa tatgtgacac agtaaagtat actaagacca tcctatcaaa 3840 tcaaggacct tttaaaggat tcaatgaagt ttccacagca tttaggcata tagactggtg 3900 gatacataca ttactcaaaa tcaaagatat ggttcttagt gttttcaaac ccagcataga 3960 aagcaaggct attcagtggt tggagagaaa taaggaacat gtttgtagta tccttgatta 4020 tgcctcagac attattgttg agtcaaaaga ccaatctaag atgaagactc aagatttcta 4080 ccaaaggtat tcagattgtt tggccaagtt caagccaatc atggcaattt gctttagaag 4140 ctgccacaac agtatcagca acacagttta cagacttttc caggagctgg ccaggatccc 4200 caaccgaatc agtaccaata atgatttaat tagaattgag cccattggca tttggatcca 4260 aggtgagcca ggacaaggaa aatctttctt gacccacacc ctctccagac aattacaaaa 4320 atcatgtaag cttaatggtg tttttactaa tccaactgct agtgagttca tggatggtta 4380 tgataatcag gacattcatt tgattgatga cttgggtcaa acaagaaaag agaaagatat 4440 tgaaatgttg tgcaattgca tttcttctgt tccctttatt gtgccaatgg cacatcttga 4500 agaaaaaggg aaattttata ctagcaagtt agttgttgcc accactaaca agtcagattt 4560 ttctagcacg gtcctccagg attctggggc actgaagagg agattccctt acattatgca 4620 cattcgagca gcaaaggcct acagcaaggc tggaaagctc aatgtaagcc aggccatggc 4680 aacaatgtca actggtgagt gctgggaagt atcaaagaat ggaagggatt gggaaacact 4740 aaaattgaaa gacctagttg acaaaattac aatcgattat aatgagaggg ttaagaatta 4800 taatgcttgg aaacaacaat tggaaaatca gactcttgat gatctagatg atgctgtatc 4860 atacattaag cacaatttcc cagatgccat accatatgtt gatgagtatc ttaatattga 4920 aatgtcaaca ttaattgaac aaatggaggc tttcatagaa ccaaagccta gtgtcttcaa 4980 atgctttgct aacaaaattg gttcaaaaat ttctaaagct tctagggaag ttgtggactg 5040 gttttcagat aaaattaaat ccatgctcag ttttgttgag aggaataagg cttggctcac 5100 agttgtatct gctgtcacca gtgctattag tatacttttg ttggtaacaa agatcttcaa 5160 gaaagaggaa tctaaagatg agagagctta taatcctact ttaccggttg ccaaacccaa 5220 gggcactttc ccagtttccc agcgggagtt caaaaatgaa gctccttatg atggacaatt 5280 ggaacacatc atttctcaaa tggcatatat tactggttca acaactggcc atatgactca 5340 ttgcgccggt tatcaacatg atgaaattat actccatggt cattccatta agtatttaga 5400 acaagaagat gaattgacac tacattacaa gaataaagtt ttcccaattg aacaaccatc 5460 tgttacccaa gtgacacttg gtggtaaacc aatggatttg gctattctca agtgtaagtt 5520 gcctttcagg ttcaagaaaa actctaaata ttacaccaac aagattggaa ctgaaagtat 5580 gctaatctgg atgactgagc aaggcattat taccaaggaa gtccaaagag tgcaccattc 5640 aggtggcatc aagacaaggg aaggaactga aagcacaaag actatcagtt atactgttaa 5700 atcttgcaaa ggaatgtgtg gtggcctact tatttcaaaa gtagaaggta acttcaaaat 5760 cctgggtatg catattgctg gtaatggtga aatgggagta gctataccct ttaattttct 5820 taaaaatgac atgtctgatc aaggcattgt tactgagatc actccaatcc agcccatgta 5880 tataaacact aaaactcaga tccacaagag ccctgtctat ggtgctgttg aggtgaaaat 5940 gggtccagct gtcctaagta agtcagacac caggttggag gaacctgtag aatgtcttat 6000 taaaaaatcg gcttccaagt acagagttaa caaattccag gtgaacaatg aactctggca 6060 aggtgtcaaa gcatgtgtta aatctaaatt cagagaaatc tttggaatga atggtattgt 6120 tgacatgaaa actgccattt taggaacttc tcatgtaaat tctatggatt tgagcacttc 6180 agctggttat agttttgtta aatctggcta caaaaagaaa gatctaattt gcttggaacc 6240 attctcagta gccccattgt tagagaggct tgtacaggac aaattccaca acttactaaa 6300 agggaatcaa ataactacaa ccttcaacac ttgccttaaa gatgagttaa gaaagctaga 6360 taagattgcc tcaggaaaaa ctaggtgtat agaggcttgt gaagttgatt attgcattgt 6420 ttacagaatg atcatgatgg aaatttatga caagatttat caaactccat gttactactc 6480 aggactagct gttggaatca acccatacaa agattggcac ttcatgatta atgctctcaa 6540 tgattacaat tatgaaatgg actattctca atatgatggc tcccttagtt caatgttgct 6600 atgggaggct gtggaagttc tagcttactg tcatgattca cctgatctcg tgatgcaact 6660 gcacaaacca gtcattgact ctgaccatgt tgttttcaac gagagatggt tgattcatgg 6720 tggtatgcca tcaggatctc catgtactac tgtgttaaat tcactatgca atttgatgat 6780 gtgtatttac actacaaatt taatcagtcc tggaattgat tgtctaccaa tcgtatatgg 6840 cgatgatgtt attctttcat tggacaaaga aattgaacca gagaaactgc aaagtatcat 6900 ggcagattca tttggagccg aagtgactgg gtcacgcaaa gatgaacctc cttcacttaa 6960 accaagaatg gaggttgaat tcttaaagcg gaaacctggt tatttcccag agtctacttt 7020 tatagtaggt aaattagaca ctgaaaatat gatacaacat ttaatgtgga tgaaaaactt 7080 tagcacattt aagcagcagc tccaatccta tttaatggaa ctatgcctcc atggaaaaga 7140 cacttatcaa cactacatta agatcttgga accatatcta caggaatgga atatcactgt 7200 ggatgattat gatgtggtta taactaagtt gatgcccatg gtgtttgatt aagattaatg 7260 ttttgttttt cttttgctat ggactatgtg gttagaacac taattaatta ggacactaac 7320 ttggaacatt ggacatgac 7339 //