ID KF155232; SV 1; linear; genomic RNA; STD; VRL; 6424 BP. XX AC KF155232; XX DT 27-JUN-2013 (Rel. 117, Created) DT 27-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Cucumber green mottle mosaic virus isolate Ah, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6424 RA Reingold V., Lachman O., Dombrovsky A.; RT "A Study on the Genetic Diversity Among Cucumber Green Mottle Mosaic Virus RT (CGMMV) Isolates in Israel"; RL Unpublished. XX RN [2] RP 1-6424 RA Reingold V., Lachman O., Dombrovsky A.; RT ; RL Submitted (28-MAY-2013) to the INSDC. RL Plant Pathology, ARO, The Volcani Center, Makabim 1, Rishon Le-Zion, Bet RL Dagan 50250, Israel XX DR MD5; 5479d341aac7248a7cc3cb8ffac8c125. XX CC ##Assembly-Data-START## CC Assembly Method :: Velvet v. 1.2.09 CC Sequencing Technology :: SOLiD CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6424 FT /organism="Cucumber green mottle mosaic virus" FT /host="cucumber" FT /isolate="Ah" FT /mol_type="genomic RNA" FT /country="Israel" FT /isolation_source="Ahituv" FT /collection_date="2011" FT /db_xref="taxon:12235" FT CDS 61..5007 FT /codon_start=1 FT /transl_except=(pos:3493..3495,aa:OTHER) FT /product="186K protein" FT /note="readthrough product" FT /db_xref="GOA:R9YXT3" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9YXT3" FT /protein_id="AGO32741.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYESSPGAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPIDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLVKKIDEIRDNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KNHSYVSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAILPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSNLDPVPALIKSEAQ FT NFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANFVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 61..3495 FT /codon_start=1 FT /product="129K protein" FT /db_xref="GOA:R9YX26" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9YX26" FT /protein_id="AGO32742.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYESSPGAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPIDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADAKIERESVSELLASGDDLVKKIDEIRDNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KNHSYVSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAILPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4994..5788 FT /codon_start=1 FT /product="movement protein" FT /note="29K protein" FT /db_xref="GOA:R9YY13" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:R9YY13" FT /protein_id="AGO32743.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRSKRHSKPPNRRLDSASEESSSVSFEDGLQSDHT" FT CDS 5763..6248 FT /codon_start=1 FT /product="coat protein" FT /note="17.3K protein" FT /db_xref="GOA:R9YV12" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:R9YV12" FT /protein_id="AGO32744.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPNAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6424 BP; 1652 A; 1235 C; 1536 G; 2001 T; 0 other; gttttaattt ttaaaattaa acaaacaaca acaacaacaa caaacaattt taaaacaaca 60 atggcaaaca ttaatgaaca aatcaacaac caacgtgacg ccgcggctag cgggagaaac 120 aatctcgtta gtcagctagc atcaaagagg gtgtatgacg aggctgttcg ctcgttggat 180 catcaagaca gacgcccgaa aatgaacttt tctcgtgtgg tcagcacaga gcacaccagg 240 cttgtaactg atgcgtatcc ggagttttcg attagcttta ccgccaccaa gaactctgta 300 cactcccttg cgggtggtct gaggctcctt gaattggaat atatgatgat gcaagtgccc 360 tacggctcac cttgttatga catcggcggt aactatacgc agcacttgtt caaaggcaga 420 tcatatgtgc attgctgcaa tccgtgccta gatcttaaag atgttgcgag gaatgtgatg 480 tacaacgata tgatcacgca acatgtgcag aggcataaag gatctggcgg gtgcagacct 540 cttccaactt tccagataga tgcattcagg aggtacgaaa gttctcccgg tgcggtcacc 600 tgttcagacg ttttccaaga gtgttcctat gattttggga gtggtaggga taatcatgcg 660 gtctcgttac attcgatcta cgatatccct tattcttcga tcggacctgc tcttcatagg 720 aagaatgtga gagtttgtta tgcagccttt catttctcgg aggcattgct tttaggttcg 780 cctgtaggta atttgaatag tattggggct cagtttaggg tcgatggtga tgatgtgcat 840 tttcttttta gtgaagagtc tactttgcat tatactcata gtttagaaaa tattaaatta 900 atcgtgatgc gtacttactt tcctgctgat gataggtttg tgtacattaa ggagttcatg 960 gttaagcgtg tggatacttt tttctttagg ttggtcaggg cagatacaca tatgcttcat 1020 aaatctgtgg ggcactattc gaaatcgaaa tctgagtact ttgcgctgaa tacccctccg 1080 atcttccaag ataaagccac gttttctgtg tggtttcctg aagcgaagcg caaggtgttg 1140 atacctaagt ttgaactttc gagatttctt tctgggaatg tgaaaatctc taggatgctt 1200 gtcgatgctg atttcgtcca taccattatt aatcacatta gcacgtatga taacaaggcc 1260 ttagtgtgga agaatgttca gtcctttgtg gaatccatac gctcaagagt aattgtaaac 1320 ggagtttccg tgaaatcaga gtggaacgta ccgatcgatc agctcactga tatctcgttc 1380 tcgatattcc ttctcgtgaa ggttaggaaa gtacagatcg agttaatgtc tgataaagtt 1440 gtaatcgagg cgaggggttt gcttcggagg ttcgcagaca gtctcaaatc cgccgtagaa 1500 ggactaggtg attgcgtcta tgatgctcta gttcaaaccg gctggtttga cacctctagc 1560 gacgaactga aagtattgct acctgaaccg tttatgacct tttcggatta tcttgaaggg 1620 atgtacgagg cagatgcaaa gatcgagaga gagagtgtct ctgagttgct tgcttccgga 1680 gacgatttag tcaagaaaat cgatgagata agagacaatt acagtggagt cgaatttgat 1740 gtagagaaat tccaagaatt ctgtaaagaa ctgaatgtta atcctatgct aattggccat 1800 gttatcgaag ctattttttc gcagaaggct ggggtgacag taacgggtct gggcacgctc 1860 tctcctgaga tgggcgcttc tgttgcgtta tccaatacct ctgtagatac atgtgaagat 1920 atggatgtaa ctgaagatat ggaggatata gtgttgatgg cggacaagaa tcattcttac 1980 gtgtcccctg agatggcgag atgggctgat gttaaatatg gcaacaataa aggggctctg 2040 gttgaataca aagtcggaac ctcgatgact ttacctgcca cctgggcaga gaagggtaag 2100 gctatcttac cgttgtcggg gatctgtgtg aggaaacccc aattttcgaa gccgcttgat 2160 gaggaggacg acttgaggtt atcaaacatg aatttcttta aggtgagcga tctaaagttg 2220 aagaagacta tcactccagt cgtttacact gggaccattc gagagaggca aatgaagaat 2280 tatattgatt acttatcggc ctctcttggt tctacgctgg gtaatctgga gagaattgtg 2340 cggagcgatt ggaacggtac tgaggagagt atgcaaacgt tcgggttgta tgactgcgaa 2400 aagtgcaagt ggttattgtt accagccgag aagaagcacg catgggccgt ggttctggca 2460 agtgatgata ccactcgcat aatcttcctt tcatatgacg aatctggttc tcctataatt 2520 gataagaaaa actggaagcg atttgctgtc tgttctgaga ccaaagtcta tagtgtaatt 2580 cgtagtttag aagttctaaa taaggaagca atagtcgatc ccggggttca cataacatta 2640 gttgacggag tgccgggttg tggaaagacc gccgaaatta tagcgagggt caattggaaa 2700 actgatctag tattgactcc cggaagggag gcggctgcta tgatcaggcg gagagcctgc 2760 gccctgcaca agtcacctgt ggcaaccagt gacaacgtca gaactttcga ttcttttgtg 2820 atgaatagga aaatctttaa gtttgacgct gtctatgttg acgagggtct gatggtccat 2880 acggggttgc ttaattttgc gttaaagatc tcaggttgta aaaaagcctt catcttcggt 2940 gatgctaagc aaatcccgtt tataaataga gtcatgaatt ttgattatcc taaggagtta 3000 agaactttaa tagtcgataa tgtagagcgt aggtatgtca cccataggtg tcctagagat 3060 gtcactagtt ttcttaatac tatctataaa gctgctgtcg ctactactag tccggttgta 3120 cattctgtga aggcaataaa ggtttcaggg gccggtattc tgaggcctga gttgacaaag 3180 atcaaaggaa agataataac gtttactcaa tctgataaac agtccttgat caagagtggg 3240 tacaatgatg tgaataccgt gcatgaaatt caaggggaaa cctttgagga gacggcagtt 3300 gtgcgtgcca ccccgactcc aataggttta attgcccgtg attcaccaca cgtgctagtg 3360 gccttaacta ggcacaccaa ggcaatggtg tattataccg ttgtgttcga tgcagttaca 3420 agtataatag cggatgtgga aaaggtcgat cagtcgatct tgaccatgtt tgctaccact 3480 gtgcctacca aatagcaatt aatgcagaac tctctgtatg tccatcgtaa tattttcctc 3540 cctgtcagta agacggggtt ttatacagac atgcaggagt tctatgatag atgccttcct 3600 gggaattcct ttgtactgaa cgatttcgat gccgtaacca tgcggttgag ggacaacgaa 3660 tttaacttac aaccttgtag gctaacttta agtaatttag atccggtacc cgctttgatt 3720 aagagtgaag cgcagaattt tctgatcccc gttttgcgta cggcctgtga aaggccgcgc 3780 attccgggtc ttcttgagaa tcttgtagct atgataaaga ggaatatgaa tactcctgat 3840 ctagctggga ccgtggatat aactaacatg tcgatttcta tagtagataa cttcttttct 3900 tcttttgtta gggatgaggt tttgcttgat cacttagact gtgttagggc tagttctatt 3960 caaagttttt ctgattggtt ttcgtgtcag ccaacctcag cggttggcca gttagctaat 4020 ttcaatttca tagatttgcc tgcctttgat acttatatgc atatgattaa gaggcaaccc 4080 aagagtcggt tagatacttc gattcagtct gaatatccgg ccttgcaaac tattgtttat 4140 catcctaaag tggtaaatgc agtttttggt ccggttttca agtatttgac taccaagttt 4200 cttagcatgg tagatagttc caagtttttc ttttacacta ggaaaaaacc agaagatctg 4260 caggaatttt tctcagatct ttcttcccat tcagattatg agattcttga gcttgatgtt 4320 tctaaatatg acaagtcgca atccgatttc catttctcta ttgagatggc aatttgggaa 4380 aagttggggc tggacgatat tttggcttgg atgtggtcta tgggtcataa aagaactata 4440 ctgcaagatt tccaagccgg gataaagacg ctcatttatt atcaacggaa gtctggtgat 4500 gtaactactt ttataggtaa tacctttatt atcgcagcgt gtgtagctag tatgttgccg 4560 ttagataagt gttttaaagc tagtttttgt ggtgatgatt cgctgatcta ccttcctaag 4620 ggcttggagt atcctgatat acaggctact gccaactttg tttggaattt cgaggcgaaa 4680 cttttccgaa agaagtatgg ttacttctgt gggaagtata taattcacca tgccaacggc 4740 tgtattgttt accctgaccc tttaaaatta attagtaaat taggtaataa gagtcttgta 4800 gggtatgagc atgttgagga gtttcgcata tctctcctcg acgttgctca tagtttgttt 4860 aatggtgctt atttccattt actcgacgat gcaatccacg aattatttcc taatgctggg 4920 ggttgcagtt ttgtaattaa ttgtttgtgt aagtatttga gtgataagcg ccttttccgt 4980 agtctttaca tagatgtctc taagtaaggt gtcagtcgag aactcgttga aacctgagaa 5040 gtttgttaaa atctcttggg tcgataagtt gctccctaat tatttttcca ttcttaagta 5100 tttatctata actgacttca gtgtagttaa agctcagagc tatgaatccc tcgtgcctgt 5160 caagttgttg cgtggtgttg atcttacaaa acacctttat gtcacattgt tgggcgttgt 5220 ggtttctggt gtatggaacg taccggaatc ctgtaggggt ggtgctactg ttgctctggt 5280 tgacacaagg atgcattctg ttgcagaggg aactatatgc aaattttcag ctcccgccac 5340 cgtccgcgaa ttctctgtta ggttcatacc taattattct gtcgtggctg cggatgccct 5400 tcgcgatcct tggtctttat ttgtgagact ctctaacgtg ggtattaagg atggtttcca 5460 tcctttgacc ttagaggtcg cttgtttagt cgctacaact aactctatta tcaaaaaggg 5520 tcttagagct tctgtagtcg agtctgtcgt ctcttccgat cagtctattg tcctagattc 5580 tttatctgag aaagttgaac ctttctttga taaagttcct atttcagcgg ctgtaatggc 5640 aagagatccc agttataggt ctaggtcgca gtctgtcggt ggtcgtagta agcggcattc 5700 taaacctcca aatcggaggt tggactctgc ttctgaagag tccagttctg tttcttttga 5760 agatggctta caatccgatc acacctagca aacttattgc gtttagtgct tcttatgttc 5820 ccgtcaggac tttacttaat tttctggttg cgtcgcaagg tactgctttc caaactcagg 5880 cgggaagaga ttctttccgc gagtctctgt ctgcgttacc ctcgtctgtc gtagatatta 5940 attctaggtt cccaaatgcg ggtttttacg ctttcctcaa cggtcctgtg ttgaggccta 6000 tcttcgtttc gcttcttagc tccacggata cgcgcaatag ggtcattgag gttgtagatc 6060 ctagcaatcc tacgactgct gagtcgctta acgctgtaaa gcgtactgat gacgcgtcta 6120 cagccgctag ggctgaaata gataatttaa tagagtctat ctctaagggt tttgatgttt 6180 acgatagggc ttcatttgaa gccgcgtttt cggtagtctg gtcagaggct accacctcga 6240 aggcttagtc ttgagggtct tctgatggtg gtgcacacca aagtgcatag tgctttcccg 6300 ttcacttaaa tcgaacggtt tgctcattgg tttgcggaaa cctctcacgt gtgacgttga 6360 agtttctatg ggcagtaatt ctgcaagggg ttcgaatccc ccctttcccc ggggtagggg 6420 ccca 6424 //