ID KF155231; SV 1; linear; genomic RNA; STD; VRL; 6424 BP. XX AC KF155231; XX DT 27-JUN-2013 (Rel. 117, Created) DT 27-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Cucumber green mottle mosaic virus isolate Ec, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6424 RA Reingold V., Lachman O., Dombrovsky A.; RT "A Study on the Genetic Diversity Among Cucumber Green Mottle Mosaic Virus RT (CGMMV) Isolates in Israel"; RL Unpublished. XX RN [2] RP 1-6424 RA Reingold V., Lachman O., Dombrovsky A.; RT ; RL Submitted (28-MAY-2013) to the INSDC. RL Plant Pathology, ARO, The Volcani Center, Makabim 1, Rishon Le-Zion, Bet RL Dagan 50250, Israel XX DR MD5; 4b0dca00d3eebc076722df4ada94e51d. XX CC ##Assembly-Data-START## CC Assembly Method :: Velvet v. 1.2.09 CC Sequencing Technology :: SOLiD CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..6424 FT /organism="Cucumber green mottle mosaic virus" FT /host="Ecballium elaterium" FT /isolate="Ec" FT /mol_type="genomic RNA" FT /country="Israel" FT /isolation_source="Newe ya'ar" FT /collection_date="1990" FT /db_xref="taxon:12235" FT CDS 61..5007 FT /codon_start=1 FT /transl_except=(pos:3493..3495,aa:OTHER) FT /product="186K protein" FT /note="readthrough product" FT /db_xref="GOA:R9YX21" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9YX21" FT /protein_id="AGO32737.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CFDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDYSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKVSRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPIDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADARIERESVSELLASGDDLFKKIDEIRGNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVPGLGTLSPEMGASVALSNNSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAILPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPSEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSDTKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKRAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYATHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSNLDPVPALIKSEAK FT DFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSPIYLPK FT GLEYPDIQATANLVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 61..3495 FT /codon_start=1 FT /product="129K protein" FT /db_xref="GOA:R9YY07" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9YY07" FT /protein_id="AGO32738.1" FT /translation="MANINEQINNQRDAAASGRNNLVSQLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CFDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDMITQHVQRHKGSGGCRPLPT FT FQIDAFRRYDYSPCAVTCSDVFQECSYDFGSGRDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKVSRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPIDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGMYEADARIERESVSELLASGDDLFKKIDEIRGNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVPGLGTLSPEMGASVALSNNSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAILPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPSEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSDTKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATSDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKRAFIFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYATHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4994..5788 FT /codon_start=1 FT /product="movement protein" FT /note="29K protein" FT /db_xref="GOA:R9YV07" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:R9YV07" FT /protein_id="AGO32739.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVGGRSKRHSKPPNRRSDSASGESSSVSFEDGLQSDHA" FT CDS 5763..6248 FT /codon_start=1 FT /product="coat protein" FT /note="17.3K protein" FT /db_xref="GOA:R9YYA3" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:R9YYA3" FT /protein_id="AGO32740.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPSTGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASIEAAFSVVWSEATTSKA" XX SQ Sequence 6424 BP; 1633 A; 1232 C; 1543 G; 2016 T; 0 other; gttttaattt ttataattaa acaaacaaca acaacaacca caaacaattt taaaacaaca 60 atggcaaaca ttaatgaaca aatcaacaac caacgcgacg ctgctgctag cgggaggaat 120 aatctcgtta gccagttagc atcaaagagg gtgtatgacg aggctgttcg ctcgttggat 180 catcaagaca gacgcccgaa aatgaacttt tctcgtgtgg tcagcacaga gcacaccagg 240 cttgtaactg atgcgtatcc ggagttttcg attagtttta ccgctaccaa gaattcagtt 300 cattcccttg cgggaggtct gaggctcctc gaattggaat atatgatgat gcaggtgcct 360 tatggttcac cttgctttga tattggcggt aattatacgc agcacttgtt caaaggtaga 420 tcatatgtgc attgctgcaa tccgtgccta gatcttaaag atgttgcgag gaatgtgatg 480 tacaacgata tgatcacgca acatgtacag aggcacaaag gatctggcgg gtgcagacct 540 cttccaactt tccagataga tgcattcagg aggtacgatt attctccctg tgcggtcacc 600 tgttcagacg ttttccaaga gtgttcctat gattttggga gtggtaggga taatcatgca 660 gtctcgttac attcgatcta cgatatccct tattcttcga tcggacctgc tcttcatagg 720 aagaatgtgc gagtttgtta tgcagccttt catttctcgg aggcattgct tttaggttcg 780 cctgtaggta atttaaatag tataggggct cagtttaggg tcgatggtga tgatgtgcat 840 tttcttttta gtgaagagtc tactttgcat tatactcata gtttagaaaa tattaagtta 900 atcgtaatgc gtacttattt tcctgctgat gataggttcg tgtacattaa ggagtttatg 960 gtcaagcgtg tggacacttt tttctttagg ttagttaggg cagacacaca tatgcttcat 1020 aaatctgtgg ggcactattc gaaatcgaaa tctgagtact ttgcgctgaa tacccccccg 1080 atcttccaag ataaagccac gttttctgtg tggtttcctg aagcgaagcg caaagtgttg 1140 atacctaagt ttgaactttc gagatttctt tctgggaatg tgaaagtctc taggatgctt 1200 gtcgatgctg atttcgtcca taccattatt aatcacatta gcacgtatga taacaaggcc 1260 ttagtgtgga agaatgttca gtcctttgta gaatctatac gctctagggt aattgtaaac 1320 ggagtttctg tgaaatccga atggaacgta ccgattgatc agcttactga tatctcattc 1380 tcaatattcc ttctcgtgaa ggttaggaaa gtacagatcg agttaatgtc tgataaagtc 1440 gtgatcgagg cgaggggttt gcttcggagg ttcgcagaca gtctcaaatc cgccgtagaa 1500 ggactaggtg attgcgtcta tgatgctcta gttcaaaccg gctggtttga cacctctagc 1560 gacgaactga aagtattgct acctgaaccg tttatgacct tttcggatta tcttgaaggg 1620 atgtacgagg cagatgcgag aattgagaga gagagtgtct ctgagctgct tgcttccgga 1680 gacgatctat tcaaaaagat tgatgagata agaggcaatt acagcggagt cgaatttgat 1740 gtggagaaat ttcaagaatt ctgtaaagaa ctgaatgtta atcctatgct aattggccat 1800 gtaatcgaag ctattttttc gcagaaggca ggggtaacag tcccgggcct aggcacgctc 1860 tctcctgaga tgggtgcttc tgttgcgttg tccaataatt ctgtagatac atgtgaagat 1920 atggatgtaa ctgaagatat ggaggatata gtgttgatgg cggacaagag tcattcttac 1980 atgtcccctg agatggcgag atgggctgat gttaaatatg gcaacaataa aggggctctg 2040 gtcgagtaca aagtcggaac ctcgatgact ttacctgcca cctgggcaga gaagggtaag 2100 gctatcttac cgttgtcggg gatctgtgtg agaaagcccc aattttcaaa gccgctcgat 2160 gaggaagacg acttgaggtt atcaaacatg aatttcttta aggtgagcga tctaaagttg 2220 aagaagacta tcactccagt cgtttacact gggaccattc gagagaggca aatgaagaat 2280 tatattgatt atctgtcggc ttctcttggt tctacgctgg gtaatctgga gagaattgtg 2340 cggagcgatt ggaacggtac cgaggagagt atgcaaactt ttggattgta tgactgtgag 2400 aagtgcaaat ggttgctgtt accatccgag aagaaacacg cctgggctgt ggtcctggcg 2460 agtgatgata ccactcgtat aatctttctg tcgtatgatg aatctggttc tcctataatc 2520 gataagaaaa attggaagcg gtttgctgtc tgttccgata ctaaagttta tagtgtgatt 2580 cgtagtttag aagtcttaaa taaggaggct atagtcgatc ctggggtgca tattactcta 2640 gtcgatggag tgccgggttg tggaaagacc gccgaaatca tagcgagggt taattggaaa 2700 actgatcttg tattgactcc cggaagggag gcggctgcta tgatcaggcg gagagcctgc 2760 gccctgcaca agtcacctgt ggcaaccagt gacaacgtca gaactttcga ttcttttgtg 2820 atgaatagga aaatctttaa gtttgacgct gtctatgttg acgagggtct gatggtccat 2880 acggggttgc ttaactttgc gttaaagatt tccggttgta aaagagcctt tatctttggt 2940 gatgctaagc aaattccgtt cattaacagg gttatgaatt tcgattatcc taaggaatta 3000 agaactttga tagttgataa tgtagagcgt aggtatgcca cccataggtg tcctagagat 3060 gtcactagtt ttcttaatac tatctataaa gccgcggtcg ctactactag tccggtcgta 3120 cattccgtga aggcaataaa ggtgtctggg gccggtattc tgaggcctga gttaacgaag 3180 atcaaaggga agattataac gtttactcag tctgataaac aatccctgat caagagtggg 3240 tacaatgatg tgaataccgt gcacgagatt caaggagaga cctttgagga gacggcagtt 3300 gtgcgtgcca ccccgactcc aataggttta attgcccgtg attcaccaca tgtactagtg 3360 gccttaacta ggcacactaa ggcaatggtg tattataccg ttgtgttcga tgcagttaca 3420 agtataatag cggatgtgga aaaggtcgat cagtcgattc tgaccatgtt tgctaccact 3480 gtgcctacca aatagcaatt aatgcagaac tctctgtatg tccatcgcaa tattttcctc 3540 cctgtcagta aaacagggtt ttatacggac atgcaggagt tctatgacag gtgccttccg 3600 ggaaattcct ttgttttgaa cgatttcgat gccgtcacta tgcggttaag ggataacgaa 3660 tttaatttgc aaccttgtag gctaacctta agtaatttag atccggtacc cgctttgatt 3720 aagagtgagg cgaaagattt tctgattccc gtactgcgaa cggcttgcga aaggccgcgt 3780 attccgggtc ttcttgaaaa ccttgttgct atgataaaga ggaatatgaa tactcctgat 3840 ttggccggaa ctgtggatat aactaacatg tcgatttcta tagtagataa cttcttttct 3900 tcttttgtta gggatgaggt tttgcttgat cacttagact gtgttagagc cagttctatc 3960 cagagttttt ctgattggtt ttcgtgtcag ccaacctcag cggttggcca gttagctaat 4020 ttcaatttca tagatttgcc tgcctttgat acttatatgc atatgattaa gaggcaaccc 4080 aagagtcggt tagatacttc gattcagtct gaatatccgg ccttgcaaac tattgtttat 4140 catccgaagg tggtgaacgc agtttttggg ccggttttta agtatctaac taccaagttt 4200 cttagcatgg tagatagttc caagtttttc ttttacacta ggaaaaagcc agaagatctg 4260 caggaatttt tctcagatct ttcttcccat tcagattatg agattcttga gcttgatgtt 4320 tctaaatatg acaagtcgca atccgatttc catttctcca ttgagatggc aatttgggaa 4380 aaattgggac tggatgatat tttggcttgg atgtggtcta tgggtcataa aagaactata 4440 ctgcaagatt tccaagccgg gataaagacg ctcatttatt atcaacggaa gtctggtgat 4500 gtaactactt ttataggtaa tacctttatt atcgcagcgt gtgtagctag tatgttgccg 4560 ttagataagt gttttaaggc tagtttttgt ggtgatgatt cgccgatcta ccttcctaag 4620 ggcttggagt atcctgatat acaggctact gccaatttag tttggaattt cgaggcgaaa 4680 cttttccgaa agaagtatgg ttacttctgt gggaaatata tcatccatca cgccaacggc 4740 tgtattgttt accctgaccc tttaaagtta attagtaaat taggtaataa gagtcttgtt 4800 gggtacgagc atgttgagga gtttcgtata tctctcctcg atgttgctca tagtttgttt 4860 aatggtgctt atttccattt gctcgacgat gcaatccacg aattatttcc taatgctggg 4920 ggttgcagtt ttgtaattaa ttgtttgtgt aagtatttga gtgataagcg ccttttccgt 4980 agtctttata tagatgtctc taagtaaggt gtcagtcgag aactcgttga aacctgagaa 5040 gtttgttaag atttcttggg ttgacaagtt gctccctaac tacttttcca ttcttaagta 5100 cctatctata actgacttca gtgtagttaa agctcagagc tatgaatccc tcgtgcctgt 5160 caagttgttg cgtggtgttg atcttacaaa acacctttat gtcacactgt tgggcgttgt 5220 ggtttctggt gtatggaacg taccggaatc ctgtaggggt ggtgctactg ttgctctggt 5280 tgacacaagg atgcattctg ttgcagaagg aactatatgc aagttttcag ctcccgccac 5340 cgtccgcgaa ttctctgtta ggttcatacc taattattct gtcgtggctg cggatgccct 5400 tcgcgatcct tggtctttat ttgtgagact ctctaatgta ggtattaagg acggttttca 5460 tccattaacc ttagaggtcg cctgtttagt tgccactact aactctatta tcaaaaaggg 5520 tcttagagct tctgtagtcg agtctgtcgt ctcttccgat cagtctattg tcttagattc 5580 tttatctgag aaagttgagc ctttcttcga taaagttcct atttcagcgg ctgtaatggc 5640 aagagatccc agttataggt ctaggtcgca gtctgtcggt ggtcgtagta agcggcattc 5700 taaacctcca aatcggaggt cggactctgc ttctggagag tccagttctg tttctttcga 5760 agatggctta caatccgatc acgcctagta aacttattgc gtttagtgct tcttatgttc 5820 ccgtcagaac tttacttaat tttctggtag cgtcgcaagg tactgctttc caaactcagg 5880 caggaagaga ttccttccgt gagtctttgt ctgcattgcc ttcgtctgtc gtagatatta 5940 attctaggtt cccgagtacg ggtttttacg ctttcctcaa cggtcctgtg ttgaggccca 6000 tcttcgtttc gcttcttagc tccacggata cgcgcaatag ggtcattgag gttgtagatc 6060 ctagcaatcc tacgactgct gagtcgctta acgctgttaa gcgtactgac gatgcgtcta 6120 cagccgctag ggctgaaata gataatttaa tagagtctat ctctaagggg tttgatgttt 6180 atgatagggc ttcaattgaa gccgcgtttt cggtagtctg gtcagaggct accacctcga 6240 aggcttagcc ttgagggtct tctgatggtg gtgcacacca aagtgcatag tgctttcccg 6300 ttcacttaaa tcgaacggtt tgctcattgg tttgcggaaa cctctcacgt gtgacgttga 6360 agtttttatg ggcagtaatt ctgcaagggg ttcgaatccc ccctttcccc gggtaggggc 6420 ccaa 6424 //