ID   KC900901; SV 1; linear; genomic RNA; STD; VRL; 1090 BP.
XX
AC   KC900901;
XX
DT   15-MAY-2013 (Rel. 116, Created)
DT   15-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Wheat streak mosaic virus isolate TR coat protein gene, partial cds.
XX
KW   .
XX
OS   Wheat streak mosaic virus
OC   Viruses; Riboviria; Potyviridae; Tritimovirus.
XX
RN   [1]
RP   1-1090
RA   Usta M.;
RT   "The survey of some wheat viruses in wheat production fields in Eastern
RT   Anatolia by multiplex RT-PCR method and the molecular characterization of
RT   some isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-1090
RA   Usta M.;
RT   ;
RL   Submitted (31-MAR-2013) to the INSDC.
RL   Plant Protection, University of Yuzuncu Yil, Zeve Kampus, Van 65080, Turkey
XX
DR   MD5; d7ee5710ca7187aba3bc04dbfb7643aa.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1090
FT                   /organism="Wheat streak mosaic virus"
FT                   /host="Triticum aestivum L."
FT                   /isolate="TR"
FT                   /mol_type="genomic RNA"
FT                   /country="Turkey"
FT                   /collected_by="M. Usta"
FT                   /collection_date="20-Jun-2012"
FT                   /identified_by="M. Usta"
FT                   /PCR_primers="fwd_name: wsmv f, fwd_seq:
FT                   cagtggatcctcgagtgaggccgcaaccga, rev_name: wsmv r, rev_seq:
FT                   cagtaagcttcgctcaaatcctggtactcgtgg"
FT                   /db_xref="taxon:31741"
FT   CDS             <1..1047
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:R4NGZ9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:R4NGZ9"
FT                   /protein_id="AGL46682.1"
FT                   /translation="SSEAATDAVLAAANAGSGSAPSSGSTQSNLSASTASGSGSSPSGS
FT                   GSGAAGGSGSGSAQTQSSNVSVMAGLDTGAKTGQGSGSKGTSGSFVSNPVRTGGRATDV
FT                   QDQTPGLVFPAPKITTKAIYMPKTVRDKIKPEMINNMIKYQPRAELIDNRYATTEQLNT
FT                   WIKEASEGLDVTEDVFINTLLPGWVYHCIINTTSPENRALGTWRVVNNAGKDNEQQLEF
FT                   KIEPMYKAAKPSLRAIMRHFGEGARVMIEESVRIGKPIIPRGFDKAGVLSINNIVAACD
FT                   FIMRGADDTPNFVQVQNSVAVNRLRGIQNKLFAQARLSAGTNEDNSRHDADDVRENTHS
FT                   FNGVNALA"
XX
SQ   Sequence 1090 BP; 331 A; 233 C; 303 G; 223 T; 0 other;
     tcgagtgagg ccgcaaccga tgctgtcctg gcagcggcaa acgccggaag tggcagtgca        60
     ccgagcagtg gaagtacgca gtcaaatctg agtgcaagca cggcaagcgg atcaggaagc       120
     tcaccatcag ggtcaggttc tggagcagcg ggtggatcag gttcaggatc agcacaaaca       180
     caatctagca acgtgtcggt catggcaggc ctcgacacgg gggctaagac tggtcaagga       240
     tcaggatcaa aaggaacaag tggttcattc gtttcgaatc ctgtgcgaac tggaggtcga       300
     gcaacggatg tgcaggatca gacaccaggc cttgtgttcc cagcaccaaa aatcacaaca       360
     aaggccatat acatgccgaa aaccgtgcgc gataagataa agcctgagat gataaataac       420
     atgattaaat accaaccgcg tgcggaactc attgataata ggtatgcaac aactgagcaa       480
     ctcaacactt ggatcaaaga agcatctgaa gggcttgatg ttacagagga tgtgttcatt       540
     aacaccttgc ttcctggatg ggtttatcat tgcataatta atacaacgag cccggagaac       600
     agagcactag gaacttggcg tgttgtgaat aatgcaggaa aggacaatga gcagcagctc       660
     gaatttaaaa tcgaaccgat gtacaaagct gcgaagccat cacttcgagc tattatgcgg       720
     cattttggtg agggagctcg ggtgatgatt gaggagagcg ttcgaattgg gaaacctatt       780
     ataccaagag gttttgacaa agccggtgtg ctaagcatca acaatattgt ggcagcgtgt       840
     gattttatca tgcgtggggc agatgacaca ccgaatttcg tgcaagtgca aaacagcgtt       900
     gcagtgaaca ggctacgcgg aatacagaat aagctgtttg cacaagcacg actgagtgcg       960
     ggtactaatg aggacaactc acgtcacgat gcagatgatg tgagggagaa cacgcacagt      1020
     ttcaatggtg taaacgcgct tgcgtgagcc cagtagaaac tacaaatccc cgagtacccg      1080
     gatttgagcg                                                             1090
//