ID   KC841821; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   KC841821;
XX
DT   29-MAY-2013 (Rel. 116, Created)
DT   15-MAY-2014 (Rel. 120, Last updated, Version 3)
XX
DE   Citrus tristeza virus isolate T525 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RX   DOI; 10.3389/fmicb.2013.00366.
RX   PUBMED; 24339822.
RA   Wang J., Bozan O., Kwon S.-J., Dang T., Rucker T., Yokomi R.K., Lee R.F.,
RA   Folimonova S.Y., Krueger R.R., Bash J., Greer G., Diaz J., Serna R.,
RA   Vidalakis G.;
RT   "Past and future of a century old Citrus tristeza virus collection: a
RT   California citrus germplasm tale";
RL   Front Microbiol. 4:366-366(2013).
XX
RN   [2]
RP   1-672
RA   Wang J., Bozan O., Kwon S.-J., Dang T., Rucker T.L., Yokomi R.K., Lee R.K.,
RA   Folimonova S.Y., Krueger R.R., Bash J.A., Greer G.D., Diaz J.M.,
RA   Serna R.S., Vidalakis G.;
RT   ;
RL   Submitted (28-MAR-2013) to the INSDC.
RL   Department of Plant Pathology and Microbiology, University of California,
RL   Riverside, 900 University Ave., Riverside, CA 92521, USA
XX
DR   MD5; 70f7020c7f0ef73d461575095fd2dc39.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNA Dragon v. 1.5.3
CC   Assembly Name         :: CTV-CP
CC   Coverage              :: 3
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /lab_host="Citrus sinensis"
FT                   /isolate="T525"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Brea, Orange County, California"
FT                   /isolation_source="originally from a 12 year old, stunted,
FT                   small fruited Valencia on Troyer citrange rootstock in the
FT                   Lambert property"
FT                   /collected_by="Jose Esparza and Chester Roistacher"
FT                   /collection_date="1975"
FT                   /PCR_primers="fwd_name: CP-U-F-16054-16075, fwd_seq:
FT                   cwtgagcrctgctttaagggtc, rev_name: CP-U-R-16836-16814,
FT                   rev_seq: gatgaaactccaccatcccgata"
FT                   /note="T525 is maintained in planta at the Citrus Clonal
FT                   Protection Program (CCPP), University of California,
FT                   Riverside; acronym: CTV; genotype: T30+T36"
FT                   /db_xref="taxon:12162"
FT   gene            1..672
FT                   /gene="CP"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /note="major coat protein"
FT                   /db_xref="GOA:R4VAV4"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:R4VAV4"
FT                   /protein_id="AGM39418.1"
FT                   /translation="MDDETKKLKNKTKETKDGDDVVAAESSFGSINLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKHPDLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLPDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 196 A; 132 C; 167 G; 177 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaccaagg aaacgaaaga tggcgacgac        60
     gttgttgctg ccgagtcttc tttcggttcc ataaacttac acatcgatcc aactttgata       120
     gcgatgaatg acgtgcgtca gttgggtacc caacagaacg ctgctttaaa cagagactta       180
     tttctcactt tgaaagggaa gcatcctgac ttacctgata aagataagga ctttcacata       240
     gctatgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact       300
     acgggtataa cgtacactcg ggagggtgtt gaagtagact tgcctgacaa actttggact       360
     gacgtcgtgt ttaactccaa gggtattggc aaccgtgcta acgcccttcg agtttggggt       420
     agaactaacg atgcccttta cttagctttt tgtagacaga atcgcaattt gagttatggc       480
     ggacgtccgc tagatgcagg gattccagcc gggtatcatt acctgtgtgc agatttcttg       540
     accggagccg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//