ID KC791690; SV 1; circular; genomic DNA; STD; VRL; 2619 BP. XX AC KC791690; XX DT 11-JUN-2013 (Rel. 117, Created) DT 11-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Tomato bright yellow mosaic virus isolate BA167 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato bright yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2619 RA Fonseca M.E.N., Fernandes-Acioli N.A.N., Costa A.F., Boiteux L.S.; RT "Tomato Bright Yellow Mosaic Virus and Tomato Bright Yellow Mottle Virus: RT two new tomato-infecting begomoviruses in Brazil"; RL Unpublished. XX RN [2] RP 1-2619 RA Fonseca M.E.N., Fernandes-Acioli N.A.N., Costa A.F., Boiteux L.S.; RT ; RL Submitted (17-MAR-2013) to the INSDC. RL Plant Genetics and Plant Breeding, EMBRAPA Vegetable Crops, Km 09 RL Brasilia-Goiania, Brasilia, DF 70359-970, Brazil XX DR MD5; 2deaab9e8ff867cbf92049e049aa9435. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2619 FT /organism="Tomato bright yellow mosaic virus" FT /segment="DNA-A" FT /host="tomato" FT /isolate="BA167" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="Sep-2012" FT /db_xref="taxon:1340746" FT CDS 171..926 FT /codon_start=1 FT /product="capsid protein" FT /note="CP" FT /db_xref="GOA:R9SA01" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:R9SA01" FT /protein_id="AGN12889.1" FT /translation="MSKRGATWRSLEGISKARRSINFSPRGGNGPRSNKAAEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHXGKVICVSDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYAKVTGGQYASNEQAIVKRFWRVNIHVVYNHQEAGKYENHTENAL FT LLYMACTYASNPVYATLKIRIYFYDSITN" FT CDS complement(923..1321) FT /codon_start=1 FT /product="AL3" FT /db_xref="GOA:R9SAJ1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R9SAJ1" FT /protein_id="AGN12888.1" FT /translation="MDSRTGEHITAPQAQNGVHIWEIPNPLYFKIIDVEDPPYTTTRIY FT HLQIRFNHNTRKALGLHKAYLNFHIWTTSITASGTRYLNRFRLLVLAYLDNIGVISINN FT VIRAVRFATDKHYIHNVLENHEIKFKLY" FT CDS complement(1072..1530) FT /codon_start=1 FT /product="AL2" FT /db_xref="UniProtKB/TrEMBL:R9S7V3" FT /protein_id="AGN12887.1" FT /translation="MFPRQRGKRSSQKLDAPHSEIRLYQLPPLSKSNTELLKEKLKYPK FT GEQSEDDALTLSAAVQFIFTLMHGIWIHAQGNTSLHLRHRMAYISGKFQIPFISRSSTW FT RIHHTQRPGYITSRYGSTTTPGKRWVSTRPTLISTSGRHRLQLLGRDI" FT CDS complement(1475..2446) FT /codon_start=1 FT /product="AL1" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R9S9X2" FT /protein_id="AGN12886.1" FT /translation="MPKTISSLILSALYRRKKHFPNYLPLQYQSINYSFVLPGNYTKMG FT NLICMSSSNSKGNSNVPTRDCSTLHLQPGQHISILTYRQLRAAQMLKHTWKKTEISLIM FT ECSKSMADQLEEVSSLPTTRMPRSSTQDQSWRPSIYLGRNNPKISSFNIITSAQILNGS FT SLRLQNHGFLRFNSPHSLTFHRRCNSGQMNISEEVPLRGRRDLSVLSLRVIPERERRCG FT HVLWGSTIILVVISTLIQNAIQMRPSTTLLTTWTPNILKLNTGKNSLGPKKTGNPIANM FT VVQFKLKEGSPQSCSAIQERDPAINVSSTKRKTQLSKIGRST" XX SQ Sequence 2619 BP; 683 A; 512 C; 625 G; 798 T; 1 other; accggatggc cgcgcgattt tttccccccc ttcttttatt tgaattaaag ttaactttga 60 tttggaccaa tgatattgcg tctgacgagg ttagatattg ttgaacaact tggcgaccaa 120 gttttaacgg ctataaatag aacgtacgac tgagattatc tttaattcaa atgtctaagc 180 gaggggccac atggcgctct ctggagggga tctcaaaggc ccgtcgttct atcaattttt 240 ctcctcgtgg aggtaatggg cctaggtcca ataaggccgc tgaatgggtt aacaggccta 300 tgtacaggaa gcccaggata tatcggatgt atagaacccc cgatgttcca agaggctgtg 360 aaggcccatg taaagtccag tcgttcgagc agcgtcatga tatttcccat sttggtaagg 420 tgatatgtgt ctcggacgtg acaaggggta atggtattac ccaccgtgta ggaaaacgtt 480 tttgtgttaa gtctgtgtat attttaggca aggtatggat ggacgagaat attaagttga 540 agaaccacac caacagtgtt atgttctggc tggtcagaga ccgtagaccg tatggtacac 600 ctatggactt tggccaagtt tttaacatgt ttgacaacga gcctagtacc gcaactgtta 660 agaacgatct tcgtgaccgt taccaagtta tgcacaagtt ttatgccaag gtgactggtg 720 gacagtatgc aagcaacgag caggctattg ttaagcgttt ttggagggtg aacattcatg 780 tggtatacaa ccatcaagag gctgggaagt acgagaatca tacggagaac gcgttattat 840 tgtatatggc atgtacatat gcgtcgaatc ctgtgtatgc aaccttaaaa attcggatct 900 atttttatga ttcgataaca aattaataaa gtttgaattt tatttcatga ttctcaagta 960 cattgtgaat atagtgtttg tccgttgcga aacgaactgc tctaattaca ttgttaattg 1020 aaatgacgcc tatattgtct aaataagcta aaactaacaa tctaaaccta tttaaatatc 1080 tcgtcccaga agctgtaatc gatgtcgtcc agatgtggaa attaaggtag gccttgtgga 1140 gacccaacgc tttcctggtg ttgtggttga accgtatctg gaggtgatat atccgggtcg 1200 ttgtgtatgg tggatcctcc acgtcgatga tcttgaaata aaggggattt ggaatttccc 1260 agatatgtac gccattctgt gcctgaggtg cagtgatgtg ttcccctgtg cgtgaatcca 1320 tatcccgtgc attaatgtga agataaattg aacagccgca ctcaaagtca atgcgtcgtc 1380 ttcggattgc tcgccttttg gatacttgag cttttctttt agcagctctg tgttggactt 1440 tgatagaggg gggagttgat aaagacgaat ttcgctatgt ggagcgtcca atttttgaga 1500 gctgcgtttt cctctttgtc gaggaaacat ttatagctgg atccctctcc tggattgcag 1560 agcacgattg aggggatccc tcctttaatt tgaactggac gaccatattt gcaattggat 1620 tgccagtctt tttgggcccc aatgagttct ttccagtgtt taattttaaa atatttgggg 1680 tccacgtcgt caataatgtt gtactgggcc tcatttgaat agcattttga attaaagtcg 1740 agatgaccac taagataatt gtggaccccc aaagcacgtg cccacatcgt ctttcccgtt 1800 ctggaatcac cctcaatgat aatactgata ggtctctccg gccgcgcagc ggaacttctt 1860 ccgaaatatt catctgccca ctgttgcatc tcctgtggaa cgttagtgaa tgaggagagt 1920 tgaaacggag gaacccatgg ttctggagcc ttaacgaaga tccgttcaaa atttgagcgg 1980 atgttatgat gttgaacgac gaaatctttg ggttgttcct ccctaaatat attgagggcc 2040 tccatgactg atcctgcgtt gaggaccttg gcatacgtgt cgttggcaga ctgctgacct 2100 cctctagctg atctgccatc gatttggaac actccatgat caatgaaatc tccgtctttt 2160 tccacgtatg ttttaacatc tgagctgctc ttagctgcct gtatgttagg atggaaatgt 2220 gctgacctgg ttggagatgt aaggtcgaac aatctctggt tggtacattg gaatttccct 2280 tcgaattgga tgaggacatg cagatgaggt tgcccatctt cgtgtaattc cctggcaaca 2340 cgaacgaata atttattgac tggtattgta aaggcaaata gttgggaaag tgcttcttcc 2400 ttcgatagag agcacttagg ataagtgagg aaatagtttt tggcatttaa acgaaatcgt 2460 tttgggagtg gcatatttgt aaataagagc ttgtacaccg attgggagct ctcaaaactt 2520 gctgaatgaa tcggtgtatt ggtgtacaat ttatactaga acccccaata gaactcccat 2580 tgtggtcccc aacacgtggc ggccatccgt tataatatt 2619 //