ID KC706664; SV 1; circular; genomic DNA; STD; VRL; 2507 BP. XX AC KC706664; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato yellow vein streak virus isolate BR:Pda23:05 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato yellow vein streak virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2507 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2507 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (26-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; d402b776ac93b401b942ee729d511353. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2507 FT /organism="Tomato yellow vein streak virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Pda23:05" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2005" FT /db_xref="taxon:55216" FT CDS 339..1109 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QKJ2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QKJ2" FT /protein_id="AGH30124.1" FT /translation="MSPTSYRRGWSFAQRRGYSRKYLFKRPYYFKRTDGKHRSGNSNQV FT NEDIKLSQQRIHENQFGPEFVMGHNTAISTFITFPSLCKTEPGRSRAYIKLKRLRFKGT FT VKIERVHADVTMDGIIPKIEGVFTMVVVVDRKPHLSSSGCLHTFDELFGARIHSHGNLA FT VTPSLKERFYIRHVWKKVISVEKDSMMVDLEGTTSMSNKRFNCWSAFKDLDRDSCNGVY FT ANISKNALLVYYCWMSDTMSTASSFVSFDLDYVG" FT CDS complement(1274..2155) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QMN2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QMN2" FT /protein_id="AGH30125.1" FT /translation="MDSQVVCPPNAFNYIESRRDEYQLSHDLTEIILQFPSKATQLSAR FT LNRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTENESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYKVSDSNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIMS FT KQFTVNDIDFSHVGYGKWERKLIRSASTSKFGLHGPIELNPGESWATRSTIETTQLEAQ FT SDLGEALHPYKDLNRLGTAILDPGDSASIIGAQRTQSNITLSMAQLNDLVRSTVQECIK FT SNCIPPQPKSLK" XX SQ Sequence 2507 BP; 742 A; 392 C; 530 G; 843 T; 0 other; accggatggc cgcgcgattt ttttttggtg gacccattct gaaagtaatt gagcgcattt 60 ttgacgtccg cgaattgagt tgagcgcaat atttgagttc cgaaaatata gttagtggag 120 taactttaat ttgaaataaa ttactgcttt tacggtaacc aatcagcttg cgattcagga 180 gcctatttat ctattacatt tatgtcagtg tcaaggtata cggtattctt cacgtggacc 240 aattaattgt tcgctatgga gtctaactaa ttaatatatg aagtgatgat ttttttatat 300 aaattccata tatattgtga tagatatgat atcgcatcat gtctcctact agctatagac 360 gtggttggtc gtttgctcaa cgacgaggtt attctcgtaa atatttgttc aaacgtcctt 420 attattttaa acgtacagat gggaaacacc gatcgggtaa ctctaatcag gtcaatgagg 480 atattaagtt gtcgcaacag cgtatacatg agaaccagtt tggtccggaa tttgtaatgg 540 gtcataatac agcaatatcg acttttatta cttttcctag tctatgtaaa actgaaccgg 600 gcagatccag ggcatatatt aagttgaaac gtttacgttt caaaggtacc gtcaagattg 660 agcgtgttca tgctgatgtg actatggatg gtataatacc aaagattgaa ggcgtattta 720 ctatggttgt cgttgttgat cgtaaacccc atttgagttc atctggttgt ctgcatacat 780 ttgatgagct ctttggtgca cggatccaca gtcatggcaa tttggctgta actccatctt 840 tgaaagagcg tttttacata cgtcacgttt ggaagaaagt aatatctgtt gagaaggaca 900 gtatgatggt tgatcttgaa ggaacgacat caatgagtaa taagcgtttt aattgttggt 960 ctgcttttaa agatcttgat cgtgattcat gtaatggtgt ttatgcgaat ataagcaaga 1020 acgccctttt agtttattac tgttggatgt cggatacgat gtctacagcg tcatcatttg 1080 tatcgttcga tcttgattat gttggttaaa aattaaaata ttaatgtatt tatacttaca 1140 tgagaaaata aatcatttaa gaaaacgtga gaaaataaat catttaagca aacgtaatca 1200 cataatataa ttataattac tgaaatattg gctgcgcagc tgcatgcaaa aaaaaatatt 1260 ggcaacttga tatttacttc aatgatttgg gttgtggagg aatacagtta gatttaatac 1320 attcttggac tgttgaccta acaagatcgt ttaattgggc cattgacagc gtgatgttgg 1380 attgcgttct ttgggcccca attattgaag ccgaatcacc tggatctagt atggcagttc 1440 ctagcctatt tagatctttg tatggatgta acgcctcccc taggtctgat tgggcttcta 1500 attgggtcgt ctctattgta ctccttgtgg cccatgactc tcctggattt agttctattg 1560 ggccatgaag cccaaattta gaagttgatg ccgatcttat caattttctc tcccactttc 1620 cataacctac atgagagaag tcgatgtcat tgacggtaaa ttgtttggac ataatcttca 1680 ctgtcggtgc cctgaaaggt atatcaaccg aatgttttgc cgttgatagc ttcaattttc 1740 ctttgaattt tgcgaagtgg gtcatctgat gaacgtttga gtcagaaacc ttataatata 1800 gcttccatgg aattgggtct ttgagtgaga aaaatgatga cgagaaatag tggaggtcta 1860 tgttgcacct gattggaaaa gtccatgacg cctgtaagga ttcattttca gtcatcctct 1920 tgtcatgaat ctccacaatt actgaaccag ttgcgttgat tggtacctgt tgtctatatt 1980 caatgacgca atgatcaatc ttcatacagc ttcgatttag tcttgcactt aattgagttg 2040 cttttgatgg aaattgcaat atgatttcgg taaggtcatg agatagttga tattcatcac 2100 gacgagattc tatataatta aaggcgttgg gtgggcaaac tacttgagag tccatatata 2160 ttacaagatt gaataagtgt agagaataat ttagaaaaag aaaaggaaac agtagtagtg 2220 atagataaga tgagtgaatg gatgtgatat tatacagaat tgtcgatcct tatatagact 2280 cttaactggt tatggataat ttggttaaac aatactgagt atacttacta aataagttta 2340 taaagttatg gtgaaaagct ttaatggtgg tatttatgta aataaggaag tgagacccga 2400 tagctctcct tcaaacttgg cgaaatgaat tggggaatgg gtctcaatat atagtagagt 2460 ccattataga atataattgc cacgtggcgg ccatccgata taatatt 2507 //