ID KC706624; SV 1; circular; genomic DNA; STD; VRL; 2572 BP. XX AC KC706624; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato severe rugose virus isolate BR:Car237:08 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato severe rugose virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2572 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2572 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (26-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; cf265c43bfcec3106d7a92528d94cc16. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2572 FT /organism="Tomato severe rugose virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Car237:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:158463" FT CDS 297..1181 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QK37" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QK37" FT /protein_id="AGH29964.1" FT /translation="MNAYLNSAFVWVYTTSIHIVQVILCKYNLYFVLSYYLNMYPIKYR FT RGMLFNHRRAYSSNPVFKRLHGAKRSDFKRRSSNQIKSMDETKMSVQRIHENQFGPEFV FT IGHNSSISTFITFPTLCKTVPNRCRSYIKLRRLRFKGTIKIDRVHAEVNMDGTSPMIEG FT VFSLVVVVDRKPHLGSSGTLHSFDEIFGARIHSHGNLAIVSSLKERFYIRHVWKKVISV FT EKDTTMVDVEGSTILSNRRFNCWSSFKDIDRESCNGVYANISKNALLVYYCWMSDNVSK FT ASTFVSFDLDYVG" FT CDS complement(1308..2189) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QNV3" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QNV3" FT /protein_id="AGH29963.1" FT /translation="MESQLVNPPNAFNYIESKRDEYQLSHDLTEIMLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVIVEIHDRRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQSTHFAKFKGRLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDIDFSHVGYGKWERKMIRSASISRLGLHNPLEIMPGESWAIRSTVRLSPSEAG FT SDIENAMHPYRQLHRLGTGTLDPGDSASVIGAQRAQSNITLSMAQLNELVKAAAHECIN FT SNCTPSQPKSLK" XX SQ Sequence 2572 BP; 738 A; 441 C; 541 G; 852 T; 0 other; accggatggc cgcgcgattt ttcttatcta ctacgtggcg aaatcgtgta cgttgcctcg 60 cgccttttcc attttaattg gagcgcattt tgaagtccgc gaaatgagtt aattgtcttt 120 ttgaaatccg cttttgtgaa tgacctttaa tttgaattaa aggttggata gttcgtattg 180 aataatcatt tcgcttgttt atttcatgtc gtgatgtaat tacaaccgtt cgttaaaaat 240 ataagaaatc tacgacgtgg actgtctaaa tttcatctac atagttaatt tgacaaatga 300 atgcatattt aaactccgct ttcgtgtggg tttacaccac gtctatacat attgtccagg 360 ttattttgtg taagtataat ttatattttg tcttatctta ttatctgaac atgtatccca 420 ttaagtatag acgtggaatg ttgtttaatc atcgacgagc ttactcatct aatcccgtat 480 ttaagcgttt acacggagcg aaacgaagtg atttcaagcg tcgttcgagt aatcagatta 540 agagcatgga tgagactaaa atgtctgttc agcggattca tgagaaccag tttggccctg 600 aatttgtaat tggccacaat tcttccatat ccacattcat tacattccct actctttgta 660 agactgtccc gaaccgttgt aggtcataca taaagttaag acgactacgt tttaaaggaa 720 caatcaagat tgaccgtgtt catgctgagg tgaatatgga cggtacaagt ccaatgattg 780 aaggagtctt ctctctggtt gtagtcgttg atcgcaaacc tcatttgggc tcatctggaa 840 ctctgcattc ttttgatgag atatttggtg caaggattca tagccatggt aacctggcaa 900 tagtatcctc tctgaaagag cgtttttaca tacgtcacgt ttggaagaaa gtaatatccg 960 ttgagaagga tacaaccatg gttgatgttg aaggaagtac tattttatct aacaggcgtt 1020 ttaattgttg gtcatccttt aaggatattg accgtgaatc atgtaatggt gtttatgcaa 1080 acataagcaa gaacgccctg ttagtttatt actgttggat gtctgataat gtgtctaagg 1140 catcgacatt tgtatcattt gaccttgatt atgttgggta aatagtaagt gtaatacgtg 1200 attagtaata atgtttaact ctctttaata ataaatacaa gtacttgtac agtaataatg 1260 ttcaactcgc agtaataaca aaaaaaatgt gtttaataat atagaattta ttttaaagat 1320 tttggctgtg aaggagtaca gttgctgttt atacattcat gggccgctgc tttaacaagt 1380 tcgtttaatt gggccattga cagtgttatg ttcgattggg ccctttgagc accaattacg 1440 gacgcagaat cacctggatc taatgtgcct gtacccagtc tatgtaattg tctgtatgga 1500 tgcatcgcgt tctctatatc tgagcccgcc tctgatgggc ttaagcgtac agtacttcta 1560 atagcccatg actctccggg cattatttca agtgggttgt gaaggcccaa tctagatatt 1620 gaggcggatc tgatcatctt cctttcccat ttgccatagc ctacgtgact gaaatcaatg 1680 tccttatctg taaattgttt tgaaaggatt ttcaccgttg gggcacggaa aggtatatca 1740 accgaatgtt tagccgtcga gagtttcagt ctccctttga atttagcgaa gtgggtactc 1800 tggtgaacgt tcgtgtcaca tactctgtag tacaatttcc atggaattgg gtccttaagg 1860 gagaagaacg acgacgaaaa gtagtgaaga tctatgttac atctgatagg aaaggtccac 1920 gacgcctgta gtgattcatt gtccgtcatt cttctgtcat gaatttcgac tataactgaa 1980 cctacggcgt taattggtac ctgttgtctg tattctatta cgcaatggtc gattttcata 2040 cagctacgac taagccttgc gcttaattga gacgccgttg aagggaattg aagcataatc 2100 tcggttagat catgggaaag ctgatattca tcacgcttag attctatata attaaatgcg 2160 ttgggaggat tcacaagctg agattccatt attgaaaata gggagcgcag cgacaatgtt 2220 tgaggaatgt taataaggga agatgataat attttcgtca actgaatata tgacaagaaa 2280 attgtctgac gatccaattg ggaaattgga gatgataata actaaaaaac gaggaatcag 2340 gagacgacga attgagagaa gatattgtat attttaggtg taattgataa atacacctct 2400 atttgctctt taaatagaat tttcaaggca atggcatatt tgtaaatatg actcctacta 2460 ccaattggta gctgctctaa aactcatatg aattggtagt tatggtagct cttatatagt 2520 agaagttcct ttaaggatat tgctacacgt ggcggccatc cgttataata tt 2572 //