ID KC706616; SV 1; circular; genomic DNA; STD; VRL; 2630 BP. XX AC KC706616; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato mottle leaf curl virus isolate BR:Jai56:08 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mottle leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2630 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2630 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (15-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; c043099d1329c7f9a7720c51b5531825. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2630 FT /organism="Tomato mottle leaf curl virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="BR:Jai56:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:172394" FT CDS 206..961 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:M4QNS3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M4QNS3" FT /protein_id="AGH29933.1" FT /translation="MPKRDAPWRSMAGTSKVSRSANFSPRGGIGSKSEKAQAWVNRPMF FT RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHTGKVMCISDVTRGNGITHRVGKRF FT CVKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVLHRFYAKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT CDS complement(958..1356) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:M4QK05" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QK05" FT /protein_id="AGH29934.1" FT /translation="MDSRTEELITAHQAQNGAFIWEVPNPLYFKITNVENPIHTNTRIY FT HIQIRFNHNLRRALDLHKCFLNFQIWTTSTTASGTTYLNRFRDLVNMYLDRLGVISINN FT VIRAVQFATDKPYVNYVLEDHSIKFKLY" FT CDS complement(1103..1492) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:M4QWW7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QWW7" FT /protein_id="AGH29936.1" FT /translation="MQNSSSSTPPSIKPQHRIAKKRIIRRKRIDLNCGCTIYQHIDCIG FT NGFTHRGTHHCTSGTEWRVYLGGPKSPIFQDNKRREPDTHEHKDIPHTDTVQPQPEESV FT GSPQMLPQLPNMDDVNDSFWDDLFK" FT CDS complement(1434..2489) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:M4QJV2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QJV2" FT /protein_id="AGH29935.1" FT /translation="MPLPRRFRIHSKNYFLTYPKCSLTKEEALSQLLGLQTPVNKLFVR FT VARELHEDGEPHLHVLIQFEGKLQCTNERLFDLISPTRSAHFHPNVQGAKSSSDVKSYV FT EKDGDFIDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQHH FT NIRSNLERIFQKAPEPRVPPFPLSSFTEVPEEMQEWADDYFGMDPAARPERPISLIIEG FT DSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEAEYNVIDDITPQYLKMKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENTALKNWTLHNAKFIFLD FT TPLYKTTTQDS" FT CDS complement(2039..2332) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QM67" FT /protein_id="AGH29932.1" FT /translation="MGNLISTCSSSSKGNYSAQTNDCSTSYPQPDQHISIRTFRELRAH FT QMSNPTWRKTETSLIMEFSRSTADQLEEVSNLPTTRMPRSSTQDPSWRPSIY" XX SQ Sequence 2630 BP; 660 A; 559 C; 623 G; 788 T; 0 other; accggatggc cgcgcgggtt tttttgaccc gctccgtgat gtattttttg tcttttacta 60 tgtggtccag tcaataaatg acaaatatga ccgtccaatc agaaatggtc ctcaaagcct 120 aattatgtaa aaatacttgg tcattaagtt tggtaaagtt tataaatggt ccttcctcgt 180 aatgttatac caactttaag tcataatgcc taagcgtgat gccccatggc gctcaatggc 240 ggggacctca aaggttagtc ggtccgccaa tttctcccct cgtggaggaa tcgggtcgaa 300 atcagagaag gcccaggcct gggttaacag gcccatgttc aggaagccca ggatatatcg 360 gatgtataga acacccgatg taccaaaggg atgcgaaggt ccatgtaagg tccaatcctt 420 cgagcagcgt cacgatgtct ctcatacggg gaaggtgatg tgtatttccg atgtcactcg 480 tggtaacggt attacccacc gcgtgggtaa acgtttttgt gtcaagtctg tgtatatatt 540 aggcaaggtc tggatggacg acaacatcaa gttgaagaac cacacgaata gtgtgatgtt 600 ctggttagtt agggacagga gaccgtatgg cactcccatg gattttggcc aggtgttcaa 660 catgtttgac aacgagccca gtactgccac ggtgaagaac gatctccgcg atcgttacca 720 ggtcctgcac cggttctatg ccaaggttac aggtggacaa tacgccagca acgagcaggc 780 tattgtcaag aggttctgga aggtcaacaa ccatgtggtg tacaaccatc aggaggctgg 840 gaaatacgag aaccatacgg agaacgctct cttattgtat atggcatgta ctcatgcctc 900 taaccccgtg tatgctactt taaaaattcg gatctatttt tatgattcga taacaaatta 960 ataaagttta aattttattg aatgatcttc gagtacataa tttacatatg gtttgtctgt 1020 tgcgaattga acagctctaa ttacattatt aatagaaatg actcctaaac gatctaaata 1080 catattaact aaatccctaa acctatttaa ataagtcgtc ccagaagctg tcgttgacgt 1140 cgtccatatt tggaagttga ggaagcattt gtggagatcc aacgctctcc tcaggttgtg 1200 gttgaaccgt atctgtatgt ggtatatcct tgtgttcgtg tgtatcgggt tctctacgtt 1260 tgttatcttg aaatataggg gatttgggac ctcccagata aacgcgccat tctgtgcctg 1320 atgtgcagtg atgagttcct cggtgcgtga atccattgcc gatgcagtcg atgtgttggt 1380 atattgtgca gccacagttt aggtctatgc gcttgcgtcg aatgatcctc ttcttagcta 1440 tcctgtgttg tggttttata gaggggggtg tcgaggaaga tgaattttgc attgtggagt 1500 gtccagtttt tgagggctgt gttttcctct ttgtcgagaa aatctttata gcttgcccct 1560 tctcctggat tgcatagcac gattgagggt atccctcctt taatttgaac tggctttccg 1620 tatttgcagt ttgattgcca gtccttttgg gccccaatga gctctttcca atgcttcatc 1680 tttagatatt gcggagtgat gtcatcaatg acattgtact ccgcttcgtt tgagtaaacc 1740 ctaggattga aatccaggtg tccactcaaa tagttatgtg ggcctaatgc acgcgcccac 1800 atcgtcttcc ccgtcctcga atcaccctcg atgatcaaac taataggtct ctccggccgc 1860 gcagcgggat ccataccaaa ataatcatca gcccactctt gcatctcctc cggaacctca 1920 gtaaaggagg agagtggaaa cggaggaacc cttggttccg gagccttttg aaagatgcgt 1980 tctaaattag aacggatgtt gtgatgttga aggacgaagt ccttcggttg ctcctccctc 2040 aatatattga gggcctccat gacggatcct gcgttgagga ccttggcata cgtgtcgttg 2100 gcagattgct gacctcctct agctgatctg ccgtcgatct ggaaaactcc atgatcaatg 2160 aagtctccgt ctttctccac gtaggatttg acatctgatg agctcttagc tccctgaacg 2220 ttcggatgga aatgtgctga tctggttggg gatatgaggt cgaacaatcg ttcgtttgtg 2280 cactgtaatt tcccttcgaa ctggatgagc acgtggagat gaggttcccc atcttcgtgt 2340 aattctctgg caactcggac gaacaattta ttaactggcg tctgtaaccc taataattga 2400 gatagagctt cttcttttgt taaagagcac tttggataag tgaggaaata attcttagag 2460 tggattctaa aacgacgtgg taatggcatt tttgtaatta aggcgtgtac accaattgag 2520 ttctctctaa aactctatgg caattggtgt attggggtac aatatatact agaagtctct 2580 atagaactct taatcatagt cacacacgtg gcggccatcc gtataatatt 2630 //