ID KC706614; SV 1; circular; genomic DNA; STD; VRL; 2663 BP. XX AC KC706614; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato mild mosaic virus isolate BR:Pda1:05 segment DNA-B, complete DE sequence. XX KW . XX OS Tomato mild mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2663 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2663 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (15-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 608e78e2ec5e610b13ce557180137c93. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2663 FT /organism="Tomato mild mosaic virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Pda1:05" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2005" FT /db_xref="taxon:536086" FT CDS 518..1285 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:B3GNB6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:B3GNB6" FT /protein_id="AGH29926.1" FT /translation="MYPVKYRRGWSTTQRRSYRRAPVFKRNAVKRADWIRRPSNSMKAH FT DEPKMTAQRIHENQFGPEFMMVQNTAISTYISFPNLGKTEPNRSRSYIKLKRLRFKGTV FT KIERVQPDVNMDGSVSKTEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARIHSHGNLSI FT TPSLKDRYYIRHVTKHVLSAEKDTMMVNLEGTTFLSNRRVSCWAGFKDHDHDSCNGVYA FT NISKNALLVYYCWMSDIMSKASTFVSYDLDYVG" FT CDS complement(1346..2227) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QWV2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QWV2" FT /protein_id="AGH29925.1" FT /translation="MESQLANPPNAFNYIESQRDEYQLSHDLTEIVLQFPSTASQISAR FT LSRSCMKIDHCVIEYRQQVPINATGAVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFCHVGYGRWERKPVRSASASTIGLRSPIQLRPGESWAVRSTVGANPSDAE FT SDIVETSHPYRELNRLGTTMLDPGESASIVGAQRAQSNITMSLGQLNELLRNTVQECIN FT SNCVPSQAKSLN" XX SQ Sequence 2663 BP; 701 A; 574 C; 647 G; 741 T; 0 other; accggatggc cgcgcgattt tttccccccc tacgtggcgc tctggaggtc gttcgatccg 60 atcgaacgtg tccccactgg tgttctctct cccctggtgt ccgttggatt tcctctacgc 120 caaatcagtt gagcgcgttt ttgacgtccg ccaaatgagt tcagcgcatt ttttgagttc 180 cgcctattgg atgctgacac gtcgcatcct atctatgtag acgcgcgctc aactgttaga 240 tattgtcagt tcgcgatatc agctgtagac cgttggataa atctgacatg caatccagct 300 ggattgtata ttggaacttg aattatttgg gcgcgactga cagaagacgg ccccattgta 360 caactccgtt agccaatcga acagctactt cggtgacaag ataaataatt gattgaccag 420 gaatttaata tttaaattcc gtctgtgagg acttattacc acgtctattt acatcagcaa 480 caactgttaa caaatttttg tgcataatta actcagcatg tatcctgtta agtatagacg 540 tggctggtcg actactcaac gacgaagtta tcgacgggct cctgtgttca agcggaatgc 600 cgttaaacgt gcagattgga tacgtcgacc gagtaattca atgaaggccc atgacgagcc 660 caagatgaca gcccagcgga tacatgagaa ccagtttggc ccagaattca tgatggttca 720 gaatacagca atttctactt acatatcctt tcccaatctt ggtaagacag aaccgaaccg 780 gtctaggtca tatattaagc taaaacgact tcgttttaaa gggactgtca agatagaacg 840 tgttcagcca gatgtcaaca tggacggttc ggtctcgaaa accgaaggtg tgttctctct 900 cgtagtggtt gtggatcgta agcctcattt gggcccttct ggatgtttgc acacctttga 960 cgagctcttc ggtgcaagga tccacagcca tgggaaccta tctattactc cttcattgaa 1020 ggaccggtac tacatacgtc atgtgaccaa acatgtactc tcggcggaaa aggacaccat 1080 gatggtcaac ctcgaaggga cgacattcct atctaacagg cgtgttagct gttgggccgg 1140 ttttaaggat catgatcatg attcatgtaa tggggtttat gctaacataa gcaagaacgc 1200 cctgttagtt tattactgtt ggatgtcgga tattatgtcc aaggcatcga catttgtatc 1260 atatgatctg gattatgttg gttgatcagg aataataatt cattaattat tataagttaa 1320 cagggaattt acaataacca tacatttaat ttaaagactt ggcctgcgaa ggcacacagt 1380 tactgttaat gcactcctgg accgtgttcc tcagcagttc gtttaattgt cccagagaca 1440 tcgtaatgtt ggactgggct ctctgggccc ccacgatgga agccgattcg cctgggtcca 1500 acattgttgt acccagtctg ttcagctccc tgtatggatg cgatgtctct actatatcgg 1560 actccgcatc cgatggattg gcacctacag tgctcctgac agcccacgac tctcctggcc 1620 taagttgtat tgggctgcga agcccaattg ttgaggcgga tgcggatcgg actggtttcc 1680 tctcccatct tccgtatccc acgtggcaga aatcgacatc cttgtcggta aactgtttgg 1740 acaggatctt gaccgtcgga gccctgaaag gaatatccac ggagtgttta gccgtcgaca 1800 gcttcagttt acctttgaat tttgcgaagt gggtcctctg atggacgttc gtgtcgcaaa 1860 ctctgtagta cagcttccat ggaattgggt ctttgaggga gaagaaggaa gatgaaaagt 1920 agtggagatc gatgttacac ctgatcggga aagtccacga cgcctgtaac gactcattgt 1980 ccgtcatcct cttgtcgtga atctccacta ccaccgcccc agtggcgtta atcggaacct 2040 gctgcctgta ctctatgacg cagtggtcta ttttcataca gctacgactg agtctggcac 2100 ttatctggga ggcggtggac ggaaactgca gtacgatctc agttaggtca tgagacagct 2160 ggtactcgtc cctttgcgac tctatataat tgaaggcgtt cggaggatta gctaactgag 2220 attccattgt ttctgtttgg tcgcgcagcg acagcgatcg actaaattga acaggagaag 2280 agaacagctg cgacagcgag aaggatttaa tgttaacaga aagagtaaag taaaggagat 2340 cgtacagatt aggatgataa ttaggacaat taaacaagtt taatggctta taaggataag 2400 aaaaggaaaa gtttagagaa gaattaggga tttacgtttc ggaggaaaga gtaaagttgg 2460 ggttctgaca ctcataggga agttaattgg gagttatatt tatagctaaa cccggaaagg 2520 gtttgatggc atttttgtaa taagaagggt gtaccccgat tgagagcctc ttcaaaactc 2580 atatgaatcg gtgtatggtg tacaatatat agtaagaagt tcctaagggc taggtaacac 2640 gtggcggcca tccgtctaat att 2663 //