ID KC706608; SV 1; circular; genomic DNA; STD; VRL; 2721 BP. XX AC KC706608; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato mild mosaic virus isolate BR:Vic19:10 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mild mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2721 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2721 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (15-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 70bcea383f0b7a6be5e909e64410e9f5. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2721 FT /organism="Tomato mild mosaic virus" FT /segment="DNA-A" FT /host="Sida urens" FT /isolate="BR:Vic19:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2010" FT /db_xref="taxon:536086" FT CDS 308..1057 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:M4QJS0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M4QJS0" FT /protein_id="AGH29905.1" FT /translation="MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKYNKASEWVNRPMYRK FT PRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCV FT KSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKS FT DLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLL FT YMACTHASNPVYASLKIRIYFYDSVLN" FT CDS complement(1054..1452) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:B3GNB2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B3GNB2" FT /protein_id="AGH29906.1" FT /translation="MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVY FT HIQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNN FT VIRAVRFATDKPYVNYVLENHSIKFKFY" FT CDS complement(1199..1588) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:M4QNQ0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QNQ0" FT /protein_id="AGH29908.1" FT /translation="MLNSSSSTPPSIKPKHRIAKKRATRRRRIDLDCGCSVFVHLNCAG FT HGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQGVPHPDTVQPQPQEDA FT GSTQGLPELPSLDDISSSFWDDIFT" FT CDS complement(1500..2585) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:M4QM53" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QM53" FT /protein_id="AGH29907.1" FT /translation="MPRKGSFCIKAKNYFLTYPKCSLSKEEALSQLLALNFPVNRKFIK FT ICRELHDDGEPHLHVLIQFEGKFQCTNNRLFDLVSPTRSAHFHPNVQGAKSSSDVKSYV FT DKDGDTIDWGVFQVDGRSARGGCQTANDAAAEALNAPSKEAALAIIREKLPEKYLFQFH FT NLNSNLDRIFAKAPEPWSPPFPLSSFTHVPDEMQEWADEYFGRDAAARPSRPVSLIVEG FT DSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLQKEENASLRSWTLKNAKFIFLD FT APLYQTEAQDCEEEGYQATQN" FT CDS complement(2171..2428) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QJY0" FT /protein_id="AGH29904.1" FT /translation="MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRR FT PTSSPMSTRTEIQSTGEFSRSTEEVLEEVARQLTTLPQRP" XX SQ Sequence 2721 BP; 658 A; 650 C; 665 G; 748 T; 0 other; accggatggc cgcgcgattt tttccccccc ctacgtggcg ctctggaggt cgttcgatcc 60 gatcgaacgt gtcccccctc ccccaaatcc cctcgcgcgc tcaattcagt tgagcgcttt 120 tttggagtcc gcgaaatggg ttcagcgcat tttttgagtt ccgcccttta actttaattt 180 aaattaaagc cttgaccaat catttcgcgt ctgacgagtt tatttagcct aactcaactt 240 aacaacgaag ttgttgaccg accgttataa attaatcctg attggactcg tcagtcttta 300 actcagaatg ccgaagcggg acgccccatg gcgcctgatg gcgggaacct caaaggttag 360 ccgatctgtc aactattccc ctcgtggagg cccaaagtac aacaaggcat ctgagtgggt 420 caacaggccc atgtatagga agcccaggat atatcggacg ctaagatcac ccgacgtccc 480 taaaggctgt gaagggcctt gtaaggtcca gtcgttcgag gcgcgacatg atgtctctca 540 tgtcgggaag gtcatatgcg tctctgacgt gacacgtggt aatggtatta cccatcgtgt 600 gggtaagcgt ttctgtgtta agtctgtata tattttaggg aagatctgga tggatgaagc 660 gatcaagctc aagaaccaca cgaacagcgt catgttctgg ttagtcagag acaggagacc 720 ctacggaact cctatggatt ttggacaggt gttcaacctg ttcgacaacg agcccagcac 780 tgccactgtt aagagcgatc tccgtgatcg cttccaagtg atgcgcaagt tttacgccaa 840 ggtcacaggt ggacagtatg ctagcaacga gcaggctctg gtcaagcgtt tctggaaggt 900 caacaatcat gtggtctaca accatcaaga agctgcgaag tacgagaacc acacagagaa 960 cgctatgtta ttgtatatgg catgtaccca tgcctctaac cctgtgtatg cgagtctcaa 1020 gattcgaatc tacttctacg attcggttct gaattaataa aatttaaatt ttattgaatg 1080 attttccagc acatagttta catatggttt gtctgttgca aaccgaacag ccctaatgac 1140 attattaagg gagatcacac ctaattgatc gagatacaac ataactaact gcctaaacct 1200 atgtaaatat gtcgtcccag aagctcgaac tgatgtcgtc cagacttgga agttcaggaa 1260 ggccttgtgt agacccagca tcctcctgag gttgtggttg aaccgtatct ggatgtggta 1320 caccctggtc gccgtgtacc gtagatcctc tacgttgtat atcttgaaat agaggggatt 1380 tgatatctcc cagatatata cgccattctc tgcctgaggt gcagtgatgc tctccccggt 1440 gcgtgaatcc atgccctgcg cagttaaggt gcacgaagac cgagcacccg cagtctaggt 1500 caattctgcg tcgcctggta gccctcttct tcgcaatcct gtgcttcggt ttgatagagg 1560 ggggcgtcga ggaagatgaa tttagcattt tttaatgtcc agcttctcag tgatgcgttt 1620 tcctccttct ggaggaaatc tttatagctg gccccctctc caggattgca gagcacgatt 1680 gatgggatac cgcctttaat ttgaacaggc tttccgtatt tgcaatttga ctgccagtcc 1740 ttttgagctc ccatcaattc tttccagtgc tttagcttta ggtagtgcgg agggacgtca 1800 tcaatgacgt tatattcagc ctcatttgaa tagaccctgg agttgaagtc caggtgtcca 1860 ctgagatagt tatgggcccc taaagcacga gcccacattg ttttgcctgt tcgactatca 1920 ccttcgacta tcaaactaac aggcctgctg ggccgcgcag cggcatctct tccaaaatat 1980 tcatcggccc actcttgcat ctcgtcggga acgtgagtga atgaggagag tggaaacgga 2040 ggagaccaag gttccggagc ctttgcgaaa atgcgatcta aattactatt tagattatgg 2100 aattggaaga gatacttttc cggcagcttt tctctgatta tggccagcgc cgcttctttt 2160 gacggcgcgt ttaaggcctc tgcggcagcg tcgttagctg tctggcaacc tcctctagca 2220 cttcttccgt cgacctggaa aactccccag tcgattgtat ctccgtcctt gtcgacatag 2280 gacttgacgt cggacgacga cttagccccc tgaacgttcg gatggaaatg tgctgacctg 2340 gttggggaga caaggtcgaa gagtctatta ttcgtgcact ggaatttccc ttcgaactgg 2400 atgaggacgt ggagatgagg ctccccatcg tcgtggagtt ctctgcagat cttgataaat 2460 ttcctgttaa ctgggaaatt tagggctaat aattgggaaa gtgcctcttc tttggataga 2520 gagcacttcg gataagtgag gaaataattt ttggctttta tacagaaaga gcccttccgt 2580 ggcatttttg taaataaggc cgtgtacccc caattgctcc agctccaaaa ctctcatgaa 2640 ttgggggtac tgggggtaca tttatagtaa gaagttccta aggcttaaaa ggggcacgtg 2700 gcggccatcc gctataatat t 2721 //