ID KC706606; SV 1; circular; genomic DNA; STD; VRL; 2713 BP. XX AC KC706606; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato mild mosaic virus isolate BR:Vic17.1:10 segment DNA-A, complete DE sequence. XX KW . XX OS Tomato mild mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2713 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2713 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (15-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 6052f0dd3a18906fbbffaeefab24f65a. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2713 FT /organism="Tomato mild mosaic virus" FT /segment="DNA-A" FT /host="Sida urens" FT /isolate="BR:Vic17.1:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2010" FT /db_xref="taxon:536086" FT CDS 303..1052 FT /codon_start=1 FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:B3GNB1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B3GNB1" FT /protein_id="AGH29895.1" FT /translation="MPKRDAPWRLMAGTSKVSRSVNYSPRGGPKFNKASEWVNRPMYRK FT PRIYRTLRSPDVPKGCEGPCKVQSFEARHDVSHVGKVICVSDVTRGNGITHRVGKRFCV FT KSVYILGKIWMDEAIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNLFDNEPSTATVKS FT DLRDRFQVMRKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAAKYENHTENAMLL FT YMACTHASNPVYASLKIRIYFYDSVLN" FT CDS complement(1049..1447) FT /codon_start=1 FT /product="replication-enhancer protein" FT /note="REN" FT /db_xref="GOA:M4QWS8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QWS8" FT /protein_id="AGH29896.1" FT /translation="MDSRTGESITAPQAENGVYIWEISNPLYFKIYNVEDLRYTATRVY FT HVQIRFNHNLRRMLGLHKAFLNFQVWTTSVRASGTTYLHRFRQLVMLYLDQLGVISLNN FT VIRAVRFATNKPYVNYVLENHSIKFKFY" FT CDS complement(1194..1583) FT /codon_start=1 FT /product="transactivating protein" FT /note="TRAP" FT /db_xref="GOA:M4QNN9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QNN9" FT /protein_id="AGH29898.1" FT /translation="MLNSSSSTPPSIKPKHRIAKKRATRRRRIDLDCGCSVFVHLNCAG FT HGFTHRGEHHCTSGREWRIYLGDIKSPLFQDIQRRGSTVHGDQGVPRPDTVQPQPQEDA FT GSTQGLPELPSLDDISSSFWDDIFT" FT CDS complement(1495..2580) FT /codon_start=1 FT /product="replication-associated protein" FT /note="REP" FT /db_xref="GOA:M4QM49" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QM49" FT /protein_id="AGH29897.1" FT /translation="MPPPKRFRINAKNYFLTYPKCSLTKEEALSQLLALEIPSQKKFIK FT VARELHDDGEPHLHVLIQFEGKFQCTNNRFFDLVSPTRSAHFHPNVQGAKSSSDVKSYV FT DKDGDTVEWGIFQVDGRSARGGCQTANDAAAEALNAPSKEAALAIIREKLPEKYLFQFH FT NLNSNLDRIFAKAPETWSPPFPLSSFTHVPDEMQEWADDYFGRDAAARPIRPVSLIVEG FT DSRTGKTMWARALGAHNYLSGHLDFNSRVYSNEAEYNVIDDVPPHYLKLKHWKELMGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENLALKNWTIKNVKFIFLD FT APLYQTQAQDCEEEGYQTTQN" FT CDS complement(2166..2423) FT /codon_start=1 FT /product="AC4 protein" FT /note="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B3GNB5" FT /protein_id="AGH29894.1" FT /translation="MGSLISTSSSSSKGNSSARIIDSSTLSPQPGQHISIRTFRGLSRR FT PTSSPMSTRTEIQSNGEFSRSTEEVLEEVARQLTTLPQRP" XX SQ Sequence 2713 BP; 656 A; 640 C; 664 G; 753 T; 0 other; accggatggc cgcgattttt ttccccccta cgtggcgctc tggaggtcgt tcgatccgat 60 cgaacgtgtc ccccccacca aatcccctcg cgcgctcaat tcagttgagc gcttttttgg 120 agtccgcgaa atgggttcag cgcatttttt gagttccgcc ctttaacttt aatttaaatt 180 aaagccttga ccaatcattt cgcgtctgac gagtttattt agcctaacag aacttaacaa 240 cgaagttgtt gaccgaccgt tataaattaa ctttgattgg actcgtcagt ttttaactca 300 gaatgccgaa gcgggacgcc ccatggcgcc tgatggcggg aacctcaaag gttagccgtt 360 ctgtcaacta ttcccctcgt ggaggcccaa agttcaacaa ggcatctgag tgggtcaaca 420 ggcccatgta tagaaagccc aggatatatc ggacgctcag atcacctgac gtccctaagg 480 gatgtgaagg gccttgtaag gtccagtcgt tcgaggcgcg acatgatgtc tctcatgtcg 540 ggaaggtcat atgcgtctct gacgttacac gtggtaatgg tattacccat cgtgtgggta 600 agcgtttttg tgtcaagtcc gtgtacatat tagggaagat ctggatggat gaagcgatca 660 agctcaagaa ccacacgaac agcgtcatgt tctggttagt cagagacagg agaccctacg 720 gcacccctat ggattttgga caggtgttca acctgttcga caacgagccc agcactgcca 780 ctgttaagag cgatctccgt gatcgcttcc aagtgatgcg caagttttac gccaaggtca 840 caggtggaca gtatgctagc aacgagcagg ctttggtcaa gcgtttctgg aaggtcaaca 900 atcatgtggt ctacaaccat caagaggctg cgaagtacga gaaccacacg gagaacgcta 960 tgttattgta tatggcatgt acccatgcct ctaaccctgt gtatgcgagt ctgaagattc 1020 gaatctactt ctacgattcg gttctcaatt aataaaattt aaattttatt gaatgatttt 1080 ccagtacata gtttacatat ggtttgtttg ttgcaaaccg aacagcccta atgacattat 1140 taagggagat cacacctaat tgatcgagat acaacataac taactgccta aacctatgta 1200 aatatgtcgt cccagaagct cgaactgatg tcgtccagac ttggaagttc aggaaggcct 1260 tgtgtagacc cagcatcctc ctgaggttgt ggttgaaccg tatctggacg tggtacaccc 1320 tggtcgccgt gtaccgtaga tcctctacgt tgtatatctt gaaatagagg ggatttgata 1380 tctcccagat atatacgcca ttctctgcct gaggtgcagt gatgctctcc ccggtgcgtg 1440 aatccatgcc ctgcgcagtt aaggtgcacg aagaccgagc acccgcagtc taggtcaatt 1500 ctgcgtcgtc tggtagccct cttcttcgca atcctgtgct tgggtttgat agaggggggc 1560 gtcgaggaag atgaatttaa cattcttgat cgtccagttc ttcagagcaa ggttttcctc 1620 tttctcgagg aaatctttat agctggcccc ctctccagga ttgcagagca cgattgatgg 1680 gataccgcct ttaatttgaa caggctttcc gtatttgcaa tttgactgcc agtccttttg 1740 agctcccatc aattctttcc agtgctttag ctttaggtag tgcggaggga cgtcatcaat 1800 gacgttatat tcagcctcat ttgaatagac cctggagttg aagtccaggt gtccactgag 1860 atagttatgg gcccctaaag cacgagccca cattgtcttg cctgttcgac tatctccttc 1920 gactatcaaa ctaacaggcc tgatgggccg cgcagcggca tctcttccaa aatagtcatc 1980 ggcccactct tgcatctcgt cgggaacgtg agtgaatgag gagagtggaa acggaggaga 2040 ccaagtttcc ggagcctttg cgaaaatgcg atctaaatta ctatttagat tatggaattg 2100 gaagagatac ttttccggca acttctctct gataatggcc agcgccgctt ctttcgacgg 2160 cgcgtttaag gcctctgcgg cagcgtcgtt agctgtctgg caacctcctc tagcacttct 2220 tccgtcgacc tggaaaattc cccattcgac tgtatctccg tccttgtcga cataggactt 2280 gacgtcggac gacgacttag ccccctgaac gttcggatgg aaatgtgctg acctggttgg 2340 ggagacaagg tcgaagaatc tattattcgt gcactggaat ttcccttcga actggatgag 2400 gacgtggaga tgaggctccc catcgtcgtg gagctctcta gctaccttga taaatttctt 2460 ctgtgaagga atttctaggg ctaataattg ggaaagtgcc tcttctttgg ttaggctgca 2520 tttggggtat gtcaagaaat agttcttggc atttattcta aaacgtttgg gcggtggcat 2580 ttttgtaata agaagggtgt acaccgattg agagcctctc caaaactcat atgaatcggt 2640 gtatggtgta caatatatag taagaagttc ctaaagctag tacaccccgg tgggcgggcc 2700 atccgttaat att 2713 //