ID KC706564; SV 1; circular; genomic DNA; STD; VRL; 2557 BP. XX AC KC706564; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Tomato chlorotic mottle virus isolate BR:Car217.1:08 segment DNA-B, DE complete sequence. XX KW . XX OS Tomato chlorotic mottle virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2557 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2557 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (26-FEB-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 8283c4714534a57a992343336ba6a1e7. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2557 FT /organism="Tomato chlorotic mottle virus" FT /segment="DNA-B" FT /host="Solanum lycopersicum" FT /isolate="BR:Car217.1:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:172391" FT CDS 452..1222 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QLQ8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QLQ8" FT /protein_id="AGH29742.1" FT /translation="MYFNNNKRRWLSTNRRNYVRYSTFKRSHSVVRNDGKRRLGISNKP FT HDDSKMSSHRIHENQYGPDFVLGHNTAISTFITYPSLGKSEPNRIKSYIKLKRLRFKGT FT VKIERVPTDLNMNGFPAKIDGVFSLVIVVDRKPHLSPSGSLYTFDELFGARIHSHGNLA FT IIPSLKDRFYIRHVAKRVLSVEKDSNMIDVEGTTTLSSRRYNCWANFRDFDHESCNGVY FT ANISKNALLVYYCWMSETVSKASTFVSFDLDYIG" FT CDS complement(1304..2185) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QWF9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QWF9" FT /protein_id="AGH29741.1" FT /translation="MSSNLVVPPNAFNYVESQRDEYQLSHDLTEIVLQFPSTASQISAK FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFSDKDIDFVHVGYGTWERKLVRCASTSRFGLNCPIEIKPGESWAYRSTIGLSSSCVD FT SERGNDLHPYKELNRLDTLILDPGESASIVAAQRTQSNITLSLAQLNEIVKSTVQECIN FT TNCTPSEPKSLK" XX SQ Sequence 2557 BP; 733 A; 455 C; 516 G; 853 T; 0 other; accggatggc cgcgcgatcg ttctctctct tttgatcctg tccgtccacg tgtttaatga 60 atttagttga gcgcgaattt gaagtccgtg aattgtgttg agcgctttat ttgagttccg 120 ctaacggatg atcgccacgt gtattaatat aagaccgttg aattaaatat gataagcgga 180 actttttcga atttcgcatt gtgtttttta gtgctgatta attatgaaat tcgaccgtta 240 gattgcacac gatagtgacg tattggtcat cgtgattgaa tactgtgtca ttagtacaag 300 tatttgttct agggtgcaat cataaaacat atgtaacgtg gaccagttaa atattgtctg 360 tataaccaag ataacccatt gatccaatta ctactatcta tataatgaga ttgatatttt 420 aattttaaaa catgcaataa gaattttgaa catgtatttt aataataata agcgtcgttg 480 gttgtccacc aaccgtcgta attacgtgcg atattctacg tttaaaaggt cacattctgt 540 ggtacgcaat gatgggaaac gtcgattagg tatttcaaac aaaccccatg acgatagtaa 600 gatgtcttcg cataggattc atgaaaacca atatgggcct gactttgtat tgggccacaa 660 cacagcgata tccacgttta taacttaccc atctcttggt aaaagtgagc ccaatcgtat 720 taagtcgtac attaagctga aacgtctgcg ctttaaaggt actgttaaga ttgaacgtgt 780 tcctaccgat ttgaacatga atggatttcc tgctaagatt gatggagtat tttctttggt 840 tattgttgtc gatcgtaaac ctcatttgag tccttctgga agtctctaca cattcgatga 900 gttatttggt gctaggatcc atagccatgg aaatttagcg ataatccctt ctctgaagga 960 tcgtttttac atacgtcatg ttgctaaacg tgtcttgtca gtggagaagg atagtaatat 1020 gattgacgtt gaggggacta caacactgtc tagtaggcgt tataattgct gggcaaattt 1080 tagagatttc gatcatgaat cttgtaatgg tgtatatgct aacataagca agaatgccct 1140 attagtttat tattgttgga tgtcggaaac agtttccaaa gcatctacat ttgtatcatt 1200 tgatctcgat tatattggat aattatttgt aaattatata ttcgataagt taaaatatgt 1260 taataaattg tcctattcta ttaaacactc aggaaagctt aatttatttt aaagactttg 1320 gttcagatgg agtacaattg gtattgatac attcttggac tgtcgactta acaatctcat 1380 ttaattgggc caacgataag gtaatgttgg actgcgtcct ctgtgctgca acgattgacg 1440 ctgattctcc ggggtctaga attaacgtgt ccaatctgtt cagctcttta tatggatgta 1500 gatcgttgcc ccgttcggag tccacacatg aactgctgag accaattgta cttctgtatg 1560 cccatgactc tccaggttta atttctattg ggcagttaag cccaaatctg gatgtcgaag 1620 cgcatctgac taatttcctc tcccatgtcc cgtaacccac atgaacaaaa tcgatatcct 1680 tatctgaaaa ctgcttcgac aatattttaa ctgttggtgc ccggaaaggg atatctactg 1740 agtgttttgc tgtggatagt tttaacttgc ccttgaattt ggcgaaatgg gtcctttggt 1800 gcacattcgt atcgctaacc cggtagtata atttccatgg tattgggtcc ttcagggaaa 1860 agaatgacga cgagaaataa tgtaaatcta tgttacatct aattgggaag gtccatgacg 1920 cttgcaatga ctcgttgtcc gtcattctct tgtcatgtat ttctactatg acagatcctg 1980 tggcgtttat cgggacttgc tgtctgtatt cgatgacgca atgatctatt ttcatgcagc 2040 tccgactaag tttagcacta atttgagatg ccgtagatgg aaattgtaga acaatttcag 2100 ttagatcatg agacaattga tattcatctc tttgagactc aacataatta aaagcatttg 2160 gagggacaac caaattagaa ctcattataa taaaaaaagg ctgcgcagct gaatcgataa 2220 ctggaattaa taagcttaaa tgatatgaat tcactaagca gaatgtcaga agacaatata 2280 atttgtttat gatgatagtc agtactaact ggtctgtatt tatagacgga ttgaatcctg 2340 agtttatacg aggtaccact tcttagcgac gtcgtttttt aactgaatgc atccttgtaa 2400 atttaagcaa tggcatattt gtaataatag ttgggcaccg attggggtct tctcaaactc 2460 tctctagcaa ttggggactg gggtcctata tatactagaa ccctctatag aactttcaat 2520 ctcgttcaca cacgtggcgg ccatcctata taatatt 2557 //