ID KC706534; SV 1; circular; genomic DNA; STD; VRL; 2665 BP. XX AC KC706534; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Sida micrantha mosaic virus isolate BR:Vic24:10 segment DNA-B, complete DE sequence. XX KW . XX OS Sida micrantha mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2665 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2665 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (01-MAR-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; ed37608c9d245af8d633b7329e13f954. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2665 FT /organism="Sida micrantha mosaic virus" FT /segment="DNA-B" FT /host="Sida sp." FT /isolate="BR:Vic24:10" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2010" FT /db_xref="taxon:228897" FT CDS 548..1318 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QW56" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QW56" FT /protein_id="AGH29601.1" FT /translation="MFPSRYRRGWSSNQRRGYPRNPVFKRSYVPKRSDVKRRPSNPNKA FT QEDGKMSSQRIHENQFGPEFVMGHNSAISTFITYPTLGKALPNRSRSYIKLRRLRFKGT FT VKIERVHADVNMDGSNPKIEGVFSLVVVVDRKPHLGSSGALLTFDELFGARIHSHGNLA FT ISPSLKSRFYIRHVFKRVLSVEKDTMMVDLEGTTTLSTRCFSCWSSFNDIDRESCNGVY FT ANISKNALLVYYCWMSDNMSKASTFVSFDLDYIG" FT CDS complement(1399..2280) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QJ08" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QJ08" FT /protein_id="AGH29600.1" FT /translation="MESQLVNPPNAFNYIESQRDEYQLSHDLTEILLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTERDIDFSHVGYGKWERKMIRSASISGVGLHSPIEIRPGESWAVRSTVGITHSDAD FT SDAENATHPYRQLHRLGTSSLDPGDSASIVGAQRAQSNITMSMAQLNELVRATAQECIN FT SNCTPSQPKSLQ" XX SQ Sequence 2665 BP; 643 A; 585 C; 653 G; 784 T; 0 other; accggatggc cgcgcgattt tcccgccccc ccacgtggcg cgctggtgcc cgttcgattc 60 ccctcccctt ggtggtcccc tcccttggtg ctagccgctc tctctcctgg ctcaattcaa 120 ttgagcgctt atttggagtc cgcgaaatgg gttaaccgca ttttttgacg tccgcctacg 180 attggtccct ttaatttgaa ttaaagggta tataaattct attgtccaat catttcgctt 240 gttatgtctt ctcgcgcgac gctcgctttt gcccaactgg atgagatgtg atttctaccg 300 ttggataata atatatatta ttcatcctct ttaatttgaa atttgaatta ttggcgagcg 360 acgtgctacc atgtcccatc gtacgaacgt gatgagttgg accagttaag ttgcacctac 420 agggttaaat tgatcaagga atttatgttt aaattccctg gtgacagatg gtgagatcag 480 gttaatcgac cacgtctatt gtttgagtag tcacagttaa cgtttgtgta ctagtcagtt 540 ttaaaccatg tttcccagta ggtatagacg tggttggtcg tctaatcagc gacgaggtta 600 cccacgtaat cccgtgttta agcgttctta cgtacccaaa cgaagtgatg tcaagcgacg 660 acctagcaat cccaacaagg cccaagagga tgggaagatg tctagtcagc gtatacacga 720 gaaccagttt gggcctgaat ttgtgatggg ccataattca gccatttcaa ccttcattac 780 ataccctact cttgggaagg ctctccctaa ccggtccagg tcatatatca agttaagacg 840 actgcggttt aagggtactg tcaagattga gcgagttcat gctgacgtca acatggatgg 900 gtccaaccca aagatcgaag gagtcttctc tcttgttgtt gttgtggatc gtaaacctca 960 tttgggctca tcgggagccc ttttaacctt tgatgagtta tttggtgcta ggatccacag 1020 ccatggtaat ctggctatat caccatctct caagagtcgg ttctacatac gacacgtgtt 1080 caaacgtgtg ctgtccgtgg agaaggatac catgatggtg gacctggaag ggactacgac 1140 tctgtctacc aggtgtttca gttgttggtc atcttttaat gacattgacc gtgaatcgtg 1200 taacggcgtc tatgctaaca taagcaagaa cgccctctta gtttattact gctggatgtc 1260 ggataatatg tccaaggcat cgacatttgt atcgtttgac ctcgattata ttggctaaat 1320 tggaaattta atacaagctt aatgcaaatg accttgttta tatatattaa taggtacacg 1380 tgttcatcta caatgatctc attgcaatga tttgggctga gaaggggtac agttactgtt 1440 gatacattcc tgggccgtag ccctaactag ctcgttcagc tgggccattg acatcgttat 1500 gttggattgg gccctttgag cacccactat tgaggctgag tcacctgggt ccagactact 1560 ggttcctagc ctgtgcagct gcctatatgg gtgcgttgcg ttctctgcat cggagtctgc 1620 gtctgagtgg gtgatcccta cagtgctcct gacagcccag gactctccag gccgtatttc 1680 aattgggctg tgtagcccaa cacccgatat ggacgcagat ctgatcatct tcctctccca 1740 ctttccgtag cccacgtggc tgaagtcgat gtccctctct gtaaactgct tggagaggat 1800 cttcactgtt ggggcacgga aaggtatgtc tacagagtgt ttcgccgtcg acagcttcag 1860 ctttcccttg aatttcgcga agtgggtcct ctgatggacg ttagtgtcgc acactctgta 1920 gtacaatttc catggaattg ggtccttgag ggagaagaag gacgaggaaa agtaatggag 1980 atcgatgttg catcgtatcg gaaacgtcca ggacgcttgc agtgactcgt tgtccgtcat 2040 cctcttgtca tggatctcca cgacgacgga acccacggcg ttaatgggta cctgctgtct 2100 gtattctatg acgcagtggt ctattttcat acagctgcga ctgagccggg cgcttaattg 2160 ggacgccgtg gatggaaatt gaagaagaat ctctgtcagg tcatgagaaa gctgatattc 2220 atcacgctga gactcaatgt aattgaatgc gtttggagga ttcactagct gagattccat 2280 tgaattttat taccagaaat aggccgcgca gcgggaacgt cagagaattt tgaacaggtg 2340 aaactaacag gtctgaaaga ctttagggtt tctgctgatg gtgaaagagt aaagtggaga 2400 agatgataat gaagacgagt tgggttgggc ttttactgga cggattgaga ggagatattg 2460 tccaattgag gtgtttcatc tagcaactcg tctgattcct ccttatatag aggattagta 2520 cggagtggca tatttgtaaa tatgaccctt actaccaatt ggtagctgct ctaaaactca 2580 tatgaatcgg tagttatggt agctcttata tactacaact tcttaagggc ctaaagggcc 2640 taaagcggcc atccgcacta atatt 2665 //