ID KC706533; SV 1; circular; genomic DNA; STD; VRL; 2655 BP. XX AC KC706533; XX DT 24-MAR-2013 (Rel. 116, Created) DT 12-MAY-2013 (Rel. 116, Last updated, Version 2) XX DE Sida micrantha mosaic virus isolate BR:Jai175:08 segment DNA-B, complete DE sequence. XX KW . XX OS Sida micrantha mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2655 RX DOI; 10.1128/JVI.00155-13. RX PUBMED; 23487451. RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T., Silva F.N., Xavier C.A., RA Hora-Junior B.T., Beserra-Junior J.E., Malta A.W., Martin D.P., Varsani A., RA Alfenas-Zerbini P., Mizubuti E.S., Zerbini F.M.; RT "Brazilian begomovirus populations are highly recombinant, rapidly RT evolving, and segregated based on geographical location"; RL J. Virol. 87(10):5784-5799(2013). XX RN [2] RP 1-2655 RA Rocha C.S., Castillo-Urquiza G.P., Lima A.T.M., Silva F.N., Xavier C.A.D., RA Hora-Junior B.T., Beserra-Junior J.E.A., Malta A.W.O., Martin D.P., RA Varsani A., Alfenas-Zerbini P., Mizubuti E.S.G., Zerbini F.M.; RT ; RL Submitted (01-MAR-2013) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, MG 36570-000, Brazil XX DR MD5; 9b9f998ad74474b655934d76c458acc0. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAman v. 7 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2655 FT /organism="Sida micrantha mosaic virus" FT /segment="DNA-B" FT /host="Sida sp." FT /isolate="BR:Jai175:08" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2008" FT /db_xref="taxon:228897" FT CDS 549..1319 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /note="NSP" FT /db_xref="GOA:M4QJ79" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M4QJ79" FT /protein_id="AGH29599.1" FT /translation="MFPSRYRRGWSSNQRRGYTRNSVFKRSYGPKRSDVRRRPSNPNKA FT QEDGKMSTQRIHENQFGPEFVMGHNSAISTFITYPTLGKGLPNRSRSYIKLRRLRFKGT FT VKIERVYADVNMDGSNPKVEGVFSLVVVVDRKPHLGSSGALLTFDELFGARIHSHGNLA FT ISPSLKDRFYIRHVLKRVLSVEKDTMMVDLEGTTTLSNRRFSCWSSFKDVDRESCNGVY FT ANISKNALLVYYCWMSDNMSKASTFVSFDLDYVG" FT CDS complement(1399..2280) FT /codon_start=1 FT /product="movement protein" FT /note="MP" FT /db_xref="GOA:M4QMX0" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M4QMX0" FT /protein_id="AGH29598.1" FT /translation="MESQLVNPPNAFNYIESQRDEYQLSHDLTEILLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTEKDIDFSHVGYGKWERKMIRTASISGVGLHSPIEIRPGESWAVRSTVGISQSDAD FT SDIENAAHPYRQLHRLGTSSLDPGDSASIVGAQRAQSNITMSMAQLNELVRATAQECIN FT SNCTPSQPKSLQ" XX SQ Sequence 2655 BP; 647 A; 564 C; 663 G; 781 T; 0 other; accggatggc cgcgcgattt tttccccccc ctacgtggcg cgctggtgcc cgttggatac 60 ccctttccct ggtggtcccc ctctcctggt gcgtttcccc ccctcccccg gctcaattca 120 attgagcgct tttttggagt ccgcgaaatg ggttaaccgc attttttgac gtccgcctac 180 gtttggtccc tttaatttga attaaagggt gtataaatac tattgtccaa tcatttcgct 240 cgggttgtct cctcgcgcga cgctcgcttt tgcccaaccg gatgagatgt gatcttggtc 300 gttggataat aatataattt attcagcctc tttaatttga aatttgaatt atttgcgagc 360 gtcgtgctac catgtcccat cgtacgaact tgatgagatg gaccagttaa gttgcactta 420 cagagttaga ttgatcaagg aatttatgtt taaattccct ggtgacagat ggtgatatca 480 ggtttattga ccacgtctat tttttgagta gctacagtta acgtttgtgt gctagtcaat 540 tttaaaacat gtttcccagt aggtatagac gtggttggtc gtctaatcag cgacgaggtt 600 acacacgtaa ttccgtattt aagcgttcat acggacccaa gcgaagtgat gtcaggcgac 660 gacccagtaa tcccaacaag gcccaagaag atggcaagat gtctacacaa cgtatacacg 720 agaaccagtt tgggcctgaa tttgtgatgg gccacaattc agccatttcg accttcataa 780 cataccccac tcttgggaag ggactcccta accggtccag gtcatatatc aagttaagac 840 gactgcgttt taagggaact gtcaagattg agcgtgtata tgctgacgtc aacatggatg 900 ggtccaaccc aaaggtggaa ggagtcttct ctcttgttgt tgttgtggat cgtaaacccc 960 atttgggctc atctggagcc cttcttacat ttgatgagct atttggtgct aggatccaca 1020 gccatggtaa tctggctata tcaccatctc tcaaggatcg attctacata cgtcatgtgc 1080 tcaaacgtgt gctgtccgta gagaaggata cgatgatggt ggacctggaa gggactacga 1140 ctttgtctaa cagacggttt agttgttggt catcgtttaa ggacgttgac cgtgagtcgt 1200 gtaatggcgt ctatgctaac ataagcaaga acgccctctt agtgtattac tgttggatgt 1260 cggataatat gtccaaggca tcgacatttg tatcgtttga cctcgattat gttgggtaaa 1320 ttggaaattt aatacaagct taatgcaaat gacatattta taatgattaa taagtacaca 1380 tgttagtcta caattatctc attgcaatga tttgggctga gaaggggtac agttgctgtt 1440 gatacattcc tgggccgtag cccgaactag ttcattgagt tgggccattg acatcgttat 1500 gttggattgg gccctctgag cacccactat tgaggccgag tcacctgggt ctagactact 1560 ggttcccagt ctgtgcagct gcctatatgg gtgcgccgcg ttctctatat ccgagtctgc 1620 gtctgattga ctgatcccta cagtgctcct gacagcccag gactctccag gccttatttc 1680 aattgggcta tgcagcccaa cacccgatat ggacgcagtt ctgatcatct ttctctccca 1740 ctttccgtag cctacgtggc tgaagtcgat gtccttctct gtaaactgct tggagaggat 1800 cttcactgtt ggggcacgga aaggtatgtc tacagagtgt ttcgccgttg acagcttcag 1860 ctttcccttg aatttcgcga agtgggtcct ctgatggacg ttagtgtcgc acactctgta 1920 gtacaatttc catggaattg ggtccttgag ggagaagaag gacgaggaaa agtaatggag 1980 atcgatgttg catcgtatcg gaaacgtcca ggacgcttgc agcgattcgt tgtcagtcat 2040 cctcttgtca tggatctcca cgacgacgga acccacggcg ttaatgggta cttgctgtct 2100 gtattctatg acgcagtggt ctattttcat acagctgcga ctgagccgtg cgcttaattg 2160 ggacgccgtg gagggaaatt gaagaagaat ctctgtcagg tcatgagaaa gctgatattc 2220 atcacgctga gactcaatgt aattgaatgc gtttggagga ttcactagct gagattccat 2280 tgaattttat taacagaaat tggccgcgca gcgggaacga gagcgaactt tgatcaggtg 2340 aaactaatag gtctgaaaga ctttagggtt tctgtttctg gtgaaagagt aaagtggaga 2400 agatgataat gaagacgagt tgggttgggc tgttactgga cggattgaga ggagatattg 2460 tccaattgag gtgtttcatt cagcaactcg tctgattcct ccttaaatag aggatgagta 2520 cggagtggca tttttgtaaa taaggagtgt actccaattg agagctcgct ctataagtca 2580 tatgcattgg ggtaaggggg acaatatata gtagaagatc ctaaggggct ttaagcggcc 2640 atccgcacta atatt 2655 //