ID KC686708; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC KC686708; XX DT 28-MAY-2013 (Rel. 116, Created) DT 28-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl Yunnan virus isolate YN2013 clone 3 segment DNA-A, DE complete sequence. XX KW . XX OS Tomato yellow leaf curl Yunnan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Ding M., Li W.H., Zhang Z.K., Zhou X.P.; RT ; RL Submitted (22-FEB-2013) to the INSDC. RL Institute of Biotechnology and Germplasm Resources, Yunnan Academy of RL Agricultural Sciences, Xueyun Road No. 9, Kunming, Yunnan 650223, China XX DR MD5; bafb7e528de77135507d3c8bccfadd67. XX CC ##Assembly-Data-START## CC Assembly Method :: DNASTAR v. 6.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Tomato yellow leaf curl Yunnan virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="YN2013" FT /mol_type="genomic DNA" FT /country="China" FT /collection_date="22-Jan-2011" FT /clone="3" FT /db_xref="taxon:1335768" FT gene 104..487 FT /gene="AV2" FT CDS 104..487 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:R4U8W5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:R4U8W5" FT /protein_id="AGM20542.1" FT /translation="MTCQTSGFRSAMWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSP FT DTLGYDLIRDLILVIRARDYVEASRRYSHFHTRFQGSSPSELRQPICQPCCCPHCPRHK FT QKEVMGEQAHVPKAQDVQDVQKS" FT gene 297..1070 FT /gene="AV1" FT CDS 297..1070 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:R4U4E4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:R4U4E4" FT /protein_id="AGM20543.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSW FT VNRPMYRKPKMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1067..1471) FT /gene="AC3" FT CDS complement(1067..1471) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:R4TUV0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:R4TUV0" FT /protein_id="AGM20544.1" FT /translation="MDSRTGELITATQAENGAYIWMVPNPLYFKIIKHDQRPFLMNHDI FT ITIRIQFNHNLRKALGLHQCFLIFQIWTRLQPQTWRFLRVFRVQCMQYLNNLGIVSINN FT VIRSVNHVLWDVLHGTIYVDHSNIIKFKLY" FT gene complement(1212..1616) FT /gene="AC2" FT CDS complement(1212..1616) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:R4U8X6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:R4U8X6" FT /protein_id="AGM20545.1" FT /translation="MQNSSPSRNHCTQVPIKVQHRIAKKSVRRRRVDLPCGCTYYYSIN FT CANHGFSHRGTHHCNSSREWRVYLDGSKSPIFQNNQTRPATVLNEPRHNHDPNTVQPQP FT EESVGTTPMFSDLPDLDSLTTSDLAFLKSI" FT gene complement(1519..2604) FT /gene="AC1" FT CDS complement(1519..2604) FT /codon_start=1 FT /gene="AC1" FT /product="rep protein" FT /db_xref="GOA:R4UB63" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:R4UB63" FT /protein_id="AGM20546.1" FT /translation="MTPPKRFQIYAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKYIK FT ICRELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYL FT EKDGDTIEWGEFQIDARSARGGQQSANDAYAKALNSGSKSEALIVIKELAPKDFVLQFH FT NLNANLDRIFAPPLEEFVCPFLSSSFDRVPEELECWAADNVRDAAARPWRPISIVIEGE FT SRTGKTMWARSLGPHNYLRGHLDLSPKVYSNDAWYNVVDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKAWALKNAEFITLTEPL FT YSSTNQGPTQNSEEERATPES" FT gene complement(2157..2447) FT /gene="AC4" FT CDS complement(2157..2447) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:R4U8X0" FT /protein_id="AGM20547.1" FT /translation="MGLLISTCLSNSKENTSAKITDSSIWYPQPGQHISIRTYRELNPA FT PTSSPIWRRTETPSNGESFRSMQDLQEGDNNQPMTLTPRRLTAEVSQRLLS" XX SQ Sequence 2754 BP; 732 A; 551 C; 613 G; 858 T; 0 other; accggatggc cgcgattttt ttaaagtggt cccctccact aactcttgtc gcccactaga 60 aacgctccct catcgcttat ttaaatgttt ttgccttata tatatgactt gccaaacaag 120 tgggtttcgt agtgcgatgt gggatccact cttgaatgaa ttcccagaaa ccgtacatgg 180 ttttaggtgt atgttagcaa ttaagtattt acaattagta gaaaatacat attctcctga 240 tacattaggg tacgatttaa ttcgtgattt aatattagtt attcgtgcta gagattatgt 300 cgaagcgtcc cgccgatata gtcatttcca cacccgcttc caaggttcgt cgccgtctga 360 acttcgacag cccatatgtc agccgtgctg ctgcccccac tgtcctcgtc acaaacaaaa 420 ggaggtcatg ggtgaacagg cccatgtacc gaaagcccaa gatgtacagg atgtacaaaa 480 gtcctgatgt tcctcgtgga tgcgaaggcc catgtaaggt ccagtcttat gaacaacgtc 540 acgatgtggc ccatgtaggt aaagtaattt gtgtgtcgga tgtcacccgt ggtaatgggt 600 tgacgcatag agtggggaag aggttctgtg tcaagtctat ttacgtttta ggtaagatct 660 ggatggatga gaacattaag accaagaatc acaccaatac agtcatgttc tttttggttc 720 gtgataggag accatttggt actcctcaag attttggtca ggtttttaac atgtatgata 780 acgagccaag tacagccact gtgaagaacg acaacagaga tcgttttcag gtccttcgtc 840 gattccaggc gacggtgacg ggtggtcagt atgcaagcaa ggagcaagcc atagttagga 900 aattcatgaa ggttaataat catgttactt acaatcatca agaggctgcg aagtatgata 960 accatacaga gaatgctctt ttattgtata tggcatgtac tcatgctagt aacccagtgt 1020 atgctacttt gaagatcagg atctatttct atgattctgt tcaaaattaa taaagtttga 1080 attttattat atttgaatga tctacataaa ttgttccgtg caaaacatcc cataatacat 1140 gattcacaga tcgaattaca ttattaatgg atacaatccc taaattattt aagtattgca 1200 tacattgaac cctaaatact cttaagaaac gccaagtctg aggttgtaag cgagtccaga 1260 tctggaagat cagaaaacat tggtgtagtc ccaacgcttt cctcaggttg tggttgaact 1320 gtattcggat cgtgattatg tcgtggttca ttaagaacgg tcgctggtcg tgtttgatta 1380 ttttgaaata taggggattt ggaaccatcc aaatatacgc gccattctct gcttgagttg 1440 cagtgatgag ttccccggtg cgagaatcca tgattggcgc agtttattga gtaataatat 1500 gtgcagccac agggtagatc aactctccgg cgtcgcacgc tcttcttcgc tattctgtgt 1560 tggaccttga ttggtacttg agtacaatgg ttccgtgagg gtgatgaatt ctgcattctt 1620 tagagcccaa gcttttagtg cggaattctt atcctcgtcc aagtactctt tatatgatga 1680 tgttggtcca ggattgcata ggaagattgt cgggatacct cctttaattt gaattggttt 1740 cccgtacttt gtgttgcttt gccagtccct ttgggccccc atgaattctt tgaagtgctt 1800 taggtagtgg ggatctacgt catcaaccac gttgtaccac gcatcattgc tgtatacttt 1860 agggcttaga tcaaggtgcc cacgtaaata attatgtgga cccagtgacc gtgcccacat 1920 agtcttccct gtacgactct caccctctat gactatactt atgggtctcc atggccgcgc 1980 agcggcatcc cttacattat cggcagccca gcattcaagt tcttctggaa ctcgatcgaa 2040 cgaagacgat aaaaatggac aaacaaattc ctctagagga ggtgcaaaaa tcctatctaa 2100 attagcattt aaattatgaa attgtaaaac gaaatctttg ggggctaatt ccttaattac 2160 gataagagcc tctgacttac ttccgctgtt aagcgccttg gcgtaagcgt cattggctga 2220 ttgttgtccc cctcttgcag atcttgcatc gatctgaaac tctccccatt cgatggtgtc 2280 tccgtccttc tccagatagg acttgacgtc ggagctggat ttagctccct gtatgttcgg 2340 atggaaatgt gctgacctgg ttggggatac caaatcgaag aatctgttat tttggcactt 2400 gtattttcct tcgaattgga taagcacgtg gagatgagga gacccatctt cgtgaagctc 2460 tctgcagatt tttatgtatt ttttatttgt aggggtttgt aggttttgta attgggaaag 2520 tgcttcttct tttgtaagtg agcactgtgg ataagtgagg aaataatttt tggcgtatat 2580 ttggaaacgt ttgggaggag tcatttgact ggtcaatcgg tactcaacaa actccgctat 2640 gcaatcggtg attggtactc aatatatagt tgagtaccaa atggcattat tgtaattccc 2700 aaaagaaatt caaaattaaa ttttgaaatc caaagcggcc atccgtataa tatt 2754 //