ID   KC590504; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   KC590504;
XX
DT   19-MAR-2013 (Rel. 116, Created)
DT   19-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Citrus tristeza virus isolate AP6 coat protein gene, complete cds.
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KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   "Characterization of Citrus tristeza virus and determination of genetic
RT   variability in Northeast and South India";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   ;
RL   Submitted (08-FEB-2013) to the INSDC.
RL   Advanced Centre for Plant Virology, Division of Plant Pathology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; c77c7b20e5cdee6761c6fac7b374908e.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis (sweet orange)"
FT                   /isolate="AP6"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tirupati"
FT                   /collected_by="K K Biswas"
FT                   /collection_date="Oct-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF7"
FT                   /db_xref="GOA:M4Q943"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:M4Q943"
FT                   /protein_id="AGH18419.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPSLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVHIQAKGQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 191 A; 128 C; 177 G; 176 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg agacgaaaga aggcgacgat        60
     gttgttgcag cagagtcttc tttcggttcc gtgaacttac acatcgatcc gactctgata       120
     acgatgaacg atgtgcgcca gttgggaacc caacagaacg ccgctttgaa cagagatttg       180
     tttcttactc tgaaagggaa gtatcctagc ttgtctgaca aggataaaga cttccacata       240
     gccatgatgt tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc       300
     acgggcataa catatactcg ggagggtgtt gaagtggatt tgtctgacaa gctttggact       360
     gacgtcgtgt ttaactctaa gggtattggt aaccgtacta atgcccttcg agtctggggc       420
     agatctaacg acgcccttta tttggctttt tgtagacaga accgcaactt gagttatggt       480
     ggacgtccgt tagatgcagg aattccagcc gggtatcact acctgtgtgc ggatttcttg       540
     accggagctg gcttgactga tttagaatgt gcagtgcaca tacaagctaa agggcaatta       600
     ttgaaaaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//