ID   KC590502; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   KC590502;
XX
DT   19-MAR-2013 (Rel. 116, Created)
DT   19-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Citrus tristeza virus isolate TP4 coat protein gene, complete cds.
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KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   "Characterization of Citrus tristeza virus and determination of genetic
RT   variability in Northeast and South India";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   ;
RL   Submitted (08-FEB-2013) to the INSDC.
RL   Advanced Centre for Plant Virology, Division of Plant Pathology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; af532a71ef8b98ce2b56e3e373763a5d.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus aurantifolia (Kagzi lime)"
FT                   /isolate="TP4"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tirupati"
FT                   /collected_by="K K Biswas"
FT                   /collection_date="Oct-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF7"
FT                   /db_xref="GOA:M4QGD1"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:M4QGD1"
FT                   /protein_id="AGH18417.1"
FT                   /translation="MDDETKKLKNKTKEPKEGDNVVAAESSFGFVNLNIDPTLIAMNDV
FT                   LKLGTQQNAALNRDLFLTLKGKYPNLSDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGVT
FT                   YTREGVEVDLSDKLWTDVVFGSKGIGNRTNALRVWGRTNDALYLAFCIQNRNLSYGGRP
FT                   LDAGIPAGYPYPCAISLTGAGLTDLESAVYLQAKEQLLKKGGPDEVVVTNVRQLGEFNT
FT                   R"
XX
SQ   Sequence 672 BP; 189 A; 126 C; 177 G; 180 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaccaagg aaccgaaaga aggcgacaat        60
     gtcgttgcgg ccgagtcttc tttcggtttt gtaaatttaa acatcgatcc gactctgata       120
     gcgatgaacg atgtgctaaa gttgggtacc caacagaatg ctgctttgaa tagagatttg       180
     tttcttacct tgaaagggaa gtatcctaac ctctccgaca aagataaaga ctttcacata       240
     gctatgatgt tatatcgttt agcggttaag agttcatcgt tacaaagcga cgatgatacc       300
     acgggtgtga cgtacactcg ggagggtgtt gaagtggatt tgtctgacaa actttggaca       360
     gacgtcgtgt ttgggtctaa gggtattggt aaccgtacta acgcccttcg agtctggggt       420
     agaactaacg atgcccttta tttggctttt tgtatacaga accgcaattt gagttatggg       480
     ggacgtccgc tagatgcagg aattccggcc gggtatccct acccgtgtgc gatttccttg       540
     accggagctg gcttgactga tttagaaagt gcagtgtact tacaggctaa agagcaatta       600
     ttaaagaagg gagggcctga tgaggtcgta gttactaatg tcaggcagct tggggaattc       660
     aacacacgtt ga                                                           672
//