ID   KC590499; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   KC590499;
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DT   19-MAR-2013 (Rel. 116, Created)
DT   19-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Citrus tristeza virus isolate TP1 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   "Characterization of Citrus tristeza virus and determination of genetic
RT   variability in Northeast and South India";
RL   Unpublished.
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RN   [2]
RP   1-672
RA   Tarafdar A., Khatun D., Biswas K.K.;
RT   ;
RL   Submitted (08-FEB-2013) to the INSDC.
RL   Advanced Centre for Plant Virology, Division of Plant Pathology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; 4205ff274ebb652734fb1d012fae2863.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis (sweet orange)"
FT                   /isolate="TP1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tirupati"
FT                   /collected_by="K K Biswas"
FT                   /collection_date="Oct-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF7"
FT                   /db_xref="GOA:M4Q938"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:M4Q938"
FT                   /protein_id="AGH18414.1"
FT                   /translation="MDDETKKLKNKNKETREGDDVVAAESSFGSVNLHIDPTLITMNDV
FT                   RQLGTQQNAALDRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 195 A; 124 C; 171 G; 182 T; 0 other;
     atggacgacg aaacaaaaaa attgaagaac aaaaacaagg aaacgagaga aggcgacgat        60
     gtcgtagctg ccgagtcttc tttcggttcc gtaaacttac acatcgatcc gactttgata       120
     acgatgaacg atgtgcgtca gttgggcacc caacagaacg ctgctttgga cagagactta       180
     ttccttactt tgaaagggaa gtatcctaac ttacctgata aagataagga ctttcacata       240
     gctatgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacgcc       300
     acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgtctgataa actttggact       360
     gacgtcgtgt ttaactctaa gggtattggt aatcgtacta acgcccttcg agtttggggt       420
     agaactaacg atgcccttta cttagctttt tgcagacaga atcgcaattt gagttatggc       480
     ggacgtccgc tagacgcagg gattccggcc gggtatcatt acttgtgtgc ggatttcttg       540
     actggagctg gtttgactga cttagaatgt gctgtgtaca tacaagctaa agaacaatta       600
     ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//