ID   KC590498; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   KC590498;
XX
DT   19-MAR-2013 (Rel. 116, Created)
DT   19-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Citrus tristeza virus isolate AG28 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Biswas K.K., Khatun D., Tarafdar A.;
RT   "Characterization of Citrus tristeza virus and determination of genetic
RT   variability in Northeast and South India";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Biswas K.K., Khatun D., Tarafdar A.;
RT   ;
RL   Submitted (08-FEB-2013) to the INSDC.
RL   Advanced Centre for Plant Virology, Division of Plant Pathology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
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DR   MD5; 93fc5f18e9579115602804b5af1f0578.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus reticulata (Khasi mandarin)"
FT                   /isolate="AG28"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Dhuliajan, Tinsukia, Assam"
FT                   /collected_by="K K Biswas"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF7"
FT                   /db_xref="GOA:M4Q7S5"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:M4Q7S5"
FT                   /protein_id="AGH18413.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVAAAESSFRSMNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGIEVDLSDKLWTDVVFNSKGIGNRSNALRVWGRTNDALYLAFCRQIPNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGGGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 194 A; 121 C; 174 G; 183 T; 0 other;
     atggacgacg agacaaagaa attgaagaac aaaaacaagg agacgaaaga aggcgacgat        60
     gttgcagcag cagaatcttc ttttcgttcc atgaacttac acatagatcc gactctgata       120
     gcgatgaacg atgtgcgtca gttgggaacc caacagaacg ccgctttgaa cagagatttg       180
     tttcttactc tgaaagggaa gtatcctaac ttgcctgaca aggataagga ctttcactta       240
     gctatgatgt tatatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc       300
     acgggcataa catatactcg ggagggtatt gaagtggatt tgtctgacaa gctttggact       360
     gacgtcgtgt ttaactctaa gggtattggt aaccgtagta atgcccttcg agtctggggt       420
     aggactaacg atgcccttta tttagctttc tgtagacaga ttcccaattt gagttatggt       480
     ggacgtccgc tagatgcagg gattccggct ggatatcatt acctatgtgc agatttcttg       540
     accggaggtg gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg       600
     ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct tgggaaattt       660
     aacacacgtt ga                                                           672
//