ID KC589699; SV 1; circular; genomic DNA; STD; VRL; 2724 BP. XX AC KC589699; XX DT 27-MAR-2013 (Rel. 116, Created) DT 21-AUG-2013 (Rel. 117, Last updated, Version 3) XX DE Ageratum enation virus isolate Sikar M 2 segment DNA-A, complete sequence. XX KW . XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2724 RX DOI; 10.1007/s11262-013-0914-2. RX PUBMED; 23636468. RA Marwal A., Sahu A.K., Choudhary D.K., Gaur R.K.; RT "Complete nucleotide sequence of a begomovirus associated with satellites RT molecules infecting a new host Tagetes patula in India"; RL Virus Genes 47(1):194-198(2013). XX RN [2] RP 1-2724 RA Marwal A., Sahu A.K., Choudhary D.K., Gaur R.K.; RT ; RL Submitted (07-FEB-2013) to the INSDC. RL Department of Science, Mody Institute of Technology and Science, Faculty of RL Arts, Science and Commerce, Lakshmangarh, Sikar, Rajasthan 332311, India XX DR MD5; da015f8b81b5f166b76ecdfc9337635f. DR EuropePMC; PMC5377872; 28466050. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2724 FT /organism="Ageratum enation virus" FT /segment="DNA-A" FT /host="Tagetes patula" FT /isolate="Sikar M 2" FT /mol_type="genomic DNA" FT /country="India:Lakshmangarh, Rajasthan" FT /collected_by="Avinash Marwal" FT /collection_date="16-Jan-2012" FT /identified_by="Avinash Marwal" FT /db_xref="taxon:188333" FT gene 138..551 FT /gene="AV2" FT CDS 138..551 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:M4UU21" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4UU21" FT /protein_id="AGH88632.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDL FT ISVIRARNYVEATSRYNHFHDRFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCPDVKVHVRSSRLSPDMTISI" FT gene 485..964 FT /gene="AV1" FT CDS 485..964 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:M4UQL8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4UQL8" FT /protein_id="AGH88633.1" FT /translation="MSGCEGPCKVQSFESRHDNQHIGKVMCVSDVTRGTGLTHRVGKRF FT CVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATV FT KNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGNPPKSF" FT gene complement(913..1440) FT /gene="AC3" FT CDS complement(913..1440) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /note="increases viral replication" FT /db_xref="GOA:M4UQY0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4UQY0" FT /protein_id="AGH88634.1" FT /translation="MDSRTGELITAALAENGVYTWENQNPLFFKITEHQNRPFLMKEDS FT ITLQIQFNYNLRKALEIHKCFLAYPIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINN FT VIRAVDHVLWDVLEHIVYVDQSYSIKFNILGWKHEYMPYLGWKHEYMPYTTLKHSQNDF FT GGLPASCWLYTT" FT gene complement(1181..1585) FT /gene="AC2" FT CDS complement(1181..1585) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="transcriptional activator for virus sense genes" FT /db_xref="GOA:M4V7W6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4V7W6" FT /protein_id="AGH88635.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLGKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSREWRVYLGESKSPVFQDNRTPEPAISHERGQHHPPNTVQLQP FT EESVGDTQVFSSLPNLDDFTASDWAILKGL" FT gene complement(1488..2573) FT /gene="AC1" FT CDS complement(1488..2573) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="involved in virus replication" FT /db_xref="GOA:M4USW3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4USW3" FT /protein_id="AGH88636.1" FT /translation="MAPPKRFQIYAKNFFLTYPHCSFTKEDALSQIQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSTDVKSYI FT DKDGDTLEWGEFQIDGKFARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYH FT NLNSNLDRIFSPPLEVYVSPFLSSSFDQVPEELEEWVSENVMVAAGRPLRPKGLVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPNYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALRNWALKNAIFVTLEGPL FT YSGSNQSAAQARQEGDEASTC" FT gene complement(2159..2416) FT /gene="AC4" FT CDS complement(2159..2416) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4UU26" FT /protein_id="AGH88637.1" FT /translation="MGNLIFTCLSSSKENTNAKITDFSTWYPQPDQHISIRTFRELNPA FT PTSSPTSTRTETPLNGENSRSMENLHEEVNRQLMMLLQKP" XX SQ Sequence 2724 BP; 747 A; 546 C; 599 G; 832 T; 0 other; accggatggc cgcgattttt ttaaaggggt ccccacaact gacaaagaca tgtccaccaa 60 tctaaatcgt cgctcaaagc ttaattgttg tgtggtccct tatttaaact tgctcaccaa 120 gtagtgcact ccgcactatg tgggatccat tattaaacga gtttcccgaa accgttcacg 180 gttttagatg tatgttagca gttaaatatc tgcagttagt agagaagact tattctcctg 240 atacattagg gcacgattta attagggatt taatttcagt aattagggct agaaattatg 300 tcgaagcgac cagcagatat aatcatttcc acgaccgctt cgaaggtacg ccgccgtctc 360 aacttcgaca gcccatatgt gagccgtgct gctgccccca ttgtccgcgt caccaaagca 420 agagcatggg cgaacaggcc catgaacaga aagcccagga tgtacaggat gtacagaagt 480 ccagatgtcc ggatgtgaag gtccatgtaa ggtccagtcg tttgagtcca gacatgacaa 540 tcagcatata ggtaaagtca tgtgtgtcag tgatgttacg cgtggaactg ggctgaccca 600 ccgagtgggt aaaaggtttt gtgttaaatc tgtttatgtc ttgggtaaga tctggatgga 660 tgaaaatatt aagaccaaga accacactaa cagtgttatg ttttttttag ttagggatcg 720 taggcctgtc gataaacctc aagattttgg agaggttttt aacatgtttg ataatgagcc 780 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc ggaaatggca 840 tgcaacagtt acgggtggac aatatgcgtc aaaggaacaa gctcttgtga agaagtttgt 900 tagggtcaat aattatgttg tgtataacca gcaagaagct ggcaaccccc caaaatcatt 960 ctgagaatgc tttaatgttg tatatggcat gtactcatgc ttccaaccca aatatggcat 1020 gtactcatgc ttccacccca aaatattgaa ttttattgaa taagattggt ctacatatac 1080 aatgtgttct aatacatccc ataatacatg atcaactgca cgaattacat tattaatact 1140 gataattcct aaattattta aatatttaag cacttgggtc ttaaagaccc ttaagaattg 1200 cccagtcgga ggctgtgaag tcatccagat tgggtaggct agaaaacact tgtgtatctc 1260 caacgctttc ctcaggttgt aattgaactg tatttggagg gtgatgctgt cctctttcat 1320 gagaaatggc cggttctggt gttctgttat cttgaaaaac aggggatttt gattctccca 1380 ggtatacacg ccattctctg ctagagctgc agtgatgagt tcccctgtgc gtgaatccat 1440 ggttgtggca ggctaatgct atgaagtatg aacacccaca agggagatca acacgtcgac 1500 gcctcgtccc cttcttgcct agcctgtgct gcactttgat tggaacctga gtagagtggg 1560 ccttcgaggg tgacgaagat cgcattcttt aaagcccaat ttctgagtgc attattcttc 1620 tcttcatcca agaactcttt ataacttgaa ttaggtcctg gattgcagag gaaaatagtg 1680 ggaattccgc ctttaatttg aactggcttt ccgtatttgg tatttgattg ccagtccctt 1740 tgggccccca tgaattcttt aaagtgcttt aggtagttgg gatctacgtc atcgatgacg 1800 ttataccacg catcattgct gtaaactttg gggcttagat ctaaatgacc gcataggtaa 1860 ttatgaggcc ctaatgacct agcccacatc gttttacccg tacgactgtc tccctcaatt 1920 actaaacctt taggcctcag aggccgccca gcggcaacca tgacattttc tgagacccat 1980 tcttcaagtt cttcaggaac ttgatcaaaa gaagaagata aaaaaggcga aacataaacc 2040 tccaacggag gactaaaaat cctatctaaa ttagaattta aattatgata ttgaaaaata 2100 aatttttctg ggagtttctc ccttattata gccattgcag cttctttaga gcctgcattt 2160 agggcttctg cagcagcatc attagctgtc tgttgacctc ctcgtgcaaa ttttccatcg 2220 atctggaatt ctccccattc aagggtgtct ccgtccttgt cgatgtagga cttgacgtcg 2280 gtgctggatt tagctccctg aatgttcgga tggaaatgtg ctgatctggt tggggatacc 2340 aggtcgaaaa atctgttatt ttggcatttg tattttcctt cgaactggat aagcacgtga 2400 agatgaggtt ccccattttc gtgaagctct ctgcagattt tgatgtattt tttgtttact 2460 ggggtttgta ggttttggat ttgggaaagt gcgtcttctt tagtaaaaga gcaatgtgga 2520 taagtgagaa agaaattttt ggcatatatt tgaaatcttt ttggaggggc cattgacttg 2580 gtcaatcggt actcagctct agtcttatgt caattggtga tcaatactca atatatagtg 2640 agtaccgaat ggcattattc cttattctca aaagaaattc aaaattcaaa tttgaaatcc 2700 acaagcggcc atccgtataa tatt 2724 //