Dbfetch
ID KC572132; SV 1; linear; genomic RNA; STD; VRL; 1762 BP. XX AC KC572132; XX DT 15-MAY-2013 (Rel. 116, Created) DT 28-AUG-2014 (Rel. 121, Last updated, Version 2) XX DE Colletotrichum acutatum RNA virus 1 isolate CaRV1 RNA-dependent RNA DE polymerase (RDRP) gene, complete cds. XX KW . XX OS Colletotrichum acutatum RNA virus 1 OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-1762 RX DOI; 10.1016/j.virusres.2014.05.028. RX PUBMED; 25008759. RA Zhong J., Chen D., Lei X.H., Zhu H.J., Zhu J.Z., Gao B.D.; RT "Detection and characterization of a novel Gammapartitivirus in the RT phytopathogenic fungus Colletotrichum acutatum strain HNZJ001"; RL Virus Res. 190:104-109(2014). XX RN [2] RP 1-1762 RA Zhong J., Zhu J.-Z., Lei X.-H., Gao B.-D.; RT ; RL Submitted (01-FEB-2013) to the INSDC. RL Department of Plant Pathology, Hunan Agricultural University, Nongdalu, RL Changsha, Hunan 410128, China XX DR MD5; f02dbc05388cb00a8a0750ec22aebf56. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..1762 FT /organism="Colletotrichum acutatum RNA virus 1" FT /host="Colletotrichum acutatum isolate HNZJ001" FT /isolate="CaRV1" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="2009" FT /db_xref="taxon:1332073" FT gene 41..1663 FT /gene="RDRP" FT CDS 41..1663 FT /codon_start=1 FT /gene="RDRP" FT /product="RNA-dependent RNA polymerase" FT /note="RT_like" FT /db_xref="GOA:R4N7P5" FT /db_xref="InterPro:IPR001205" FT /db_xref="UniProtKB/TrEMBL:R4N7P5" FT /protein_id="AGL42312.1" FT /translation="MTSEPFPAFTFDYPGKAEVVNLQKVDSWSKPFRHISHVSWTGKKR FT GVLQNTQRYDPFVNEALRHFDNDFRRSLKGWTRTPGNEAKLRASLDKYDMPSRTFDDVF FT KDDSKLASCYEKAYRQVSAEFKLDTPVVPKFPTAVDLVMDTSSGYPHYTRKSLIAKEIL FT QEGRTWLHHAKSKEFSRLPLLPCTVGVRGALSAEDDPKTRLIWMYPAAVTVAEGVYAQP FT LIKAIYEQKADLLLVGTETRFRLSKFLSLIREDKDEYGVGLDFSSYDTFPVTDLIRDAF FT AILKQNIAFGSYWDPDNGTITAGLDDLRDHDRVKSRAIKGYENLIEYFIHTPLILPNGR FT IVAKHHGVPSGSHFTNLIDSIVNRLLQTTFGFYTERSIRNLKTNGDDSAFTVTSTYRDN FT ILEDAATFFKLWYMVVKPEKSCVAGTPAEMHISGTKWKALLPTRSTHEWMLMALYPSTY FT VKDQNLSFQRLLGIGIAGAFYDAKYCQFFEYFQTGYDCRHGTNLLSWKRLRWLEPVFGI FT NDLPLIYKKKTAVTKIRTILWAP" XX SQ Sequence 1762 BP; 476 A; 455 C; 369 G; 462 T; 0 other; cttttgtcag tactagttag ctactaggtc acattgtgat atgacatctg aacccttccc 60 cgcctttacc ttcgattatc caggaaaagc cgaagttgtt aatcttcaga aagttgactc 120 atggtcaaaa ccttttcgac atatcagcca cgtttcgtgg actggaaaga aaagaggagt 180 gttgcagaac actcagcgtt atgatccttt cgtcaatgaa gcactaagac acttcgataa 240 tgatttccgt agatcactga aaggctggac tagaaccccg ggaaatgaag cgaaactccg 300 agcgtcactc gataaatatg acatgccatc gcgtactttt gatgacgtgt tcaaagacga 360 ctccaaactg gctagctgtt acgaaaaagc ttaccgccaa gtttctgctg aattcaaact 420 cgacactccc gttgttccga agttccctac cgctgttgat ctggtcatgg acacctcttc 480 aggatacccg cactacactc gaaagagtct cattgcgaag gaaatcttac aagaaggtcg 540 tacctggttg caccacgcca agagcaagga attctctcga ctgccgctgc taccttgcac 600 agtcggagtt cgtggcgccc tctcagccga ggacgacccc aagacaagac tcatctggat 660 gtaccctgct gctgttactg ttgcagaagg tgtttacgcc cagccgttaa ttaaagctat 720 ttacgagcag aaagctgact tgctacttgt cggcactgag actcgtttta ggctttccaa 780 gtttctgtct ctcattcgag aagacaagga cgaatacgga gttggtcttg acttttcttc 840 ctatgatacc tttcctgtca ctgatctgat cagagacgcc tttgccatcc taaagcagaa 900 cattgctttt ggatcatatt gggacccaga caatgggacc atcactgcag ggctcgatga 960 tttacgtgat cacgacagag tgaagtctcg cgcaatcaag ggttacgaaa acctgattga 1020 gtacttcatc catacacctt tgattctacc taatggacgc atagtcgcta aacatcacgg 1080 cgtgccatct ggatcacact ttacgaatct tatcgattca atcgtcaatc gtttgcttca 1140 aacgacgttc ggattttaca ctgaacgttc tattcggaac ctgaaaacga atggagatga 1200 ctccgctttt acagtgacct ctacctacag agacaacatc cttgaggatg ctgctacatt 1260 cttcaaactg tggtacatgg tcgtcaagcc tgaaaagagt tgtgttgccg gcacaccagc 1320 cgaaatgcat atctctggca ctaaatggaa agcgctactc ccaacacgct ccacacatga 1380 gtggatgcta atggcactct atccttcaac atacgtgaaa gaccaaaacc tttcattcca 1440 aagactcctt ggaataggca ttgctggcgc attttatgac gcaaagtatt gtcagttctt 1500 cgagtatttc caaactggat acgactgtcg acacgggacc aacctcttat cgtggaaaag 1560 actacgatgg ctggaacctg tatttggcat caacgactta ccgttgatat acaaaaagaa 1620 gactgcggtc accaagatcc gcacgattct ctgggctcca tagccctagg caaagaaagg 1680 aacgactgga cacacctcgt ccacgccttt ttccgaacgg tttctctcac gagatctctt 1740 caccttccct tcctcaccgt tt 1762 //