ID KC527794; SV 1; linear; genomic RNA; STD; VRL; 3363 BP. XX AC KC527794; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP20 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3363 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3363 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; 7b360a715fa4e46a1b7d065a090304ff. XX FH Key Location/Qualifiers FH FT source 1..3363 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP20" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:R9UJU3" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9UJU3" FT /protein_id="AGN56132.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKAAHEQLEEQLQHQRRGR FT KVYVRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIKNAFSETEDVTPLVGKLNSTVFTRARNFKTLVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASFIWKWFAAMTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGNVLAAQKAEKLAEKLAQPVDEVSDRPEVSSPTPDDTADVCGKEQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELYIVNSECVICNSES FT LSTVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNDCPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRSIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGILNGDLIAEC FT IARA" XX SQ Sequence 3363 BP; 859 A; 725 C; 802 G; 977 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt cttaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatta 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaccgccctc gttgataagg 180 cagctcatga gcagctcgag gagcaattac agcatcaacg caggggccgt aaggtctacg 240 ttcggaatgt actgagcgta aaggattctg aggtcatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacataac gtacactgct 480 gttccccttg tttgggtatt cgtgataaaa tgcgccacac ggaacgatta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggat ttttgcactc 600 atcctgctgc agattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggattg tgtgaagcga tgaacgctca cggaaccact attttgaagg 720 gaacgatgat gttcgatggt gctatgatgt ttgacgatca aggtataatt cccgaactta 780 attgccagtg gaggaagatt aagaacgctt tctccgaaac tgaagacgtc acaccactgg 840 tcggtaaatt gaattccaca gtattcaccc gcgcgcgtaa ttttaagact ttggtagctt 900 tcgatttcat caacgaatct actatgtctt atgttcatga ttgggagaat ataaaatctt 960 ttcttacgga ccagacttat tcctacaaag gaatgactta cggtattgag cgttgtgtca 1020 tcaatgctgg tatcatgacg tacaagatta tcggagtacc tggtatgtgc ccacctgaac 1080 tcattcgaca ttgtatttgg ttcccctcta ttaaggacta tgttggtcta aagattcccg 1140 cgtcgcagga cttggttaag tggaaaacag tgcgtatttt aacgtcaaca ttgcgtgaaa 1200 ctgaagagat tgctatgagg tgttataatg ataagaaagc atggatggaa caatttaagg 1260 ttatcttagg tgttctatct gctaaatcat ctacaattgt catcaatggt atgtccatgc 1320 agtctggcga acggatagat atcaatgatt accattacat tggtttcgcc attcttcttc 1380 acacaaaaat gaaatatgag caactaggaa aaatgtatga tatgtggaac gcttcgttta 1440 tttggaagtg gtttgcagcg atgactcgtc cgctgcgcgt atttttctct agtgttgttc 1500 atgcgctgtt cccgactttg agaccccgtg aggaaaaaga attcctgatt aagctctcca 1560 ccttcgtaac ttttaatgaa gagtgctcat ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc atatgttgcc acacaggctg ttactgatgg gaacgttttg gctgcgcaga 1680 aagccgagaa gcttgctgag aagcttgcac aacccgtgga tgaggtatca gacagacctg 1740 aggtgtcatc tccaacacct gatgatacgg ctgatgtttg tggaaaggag caagaagttt 1800 cggaacttga ctcattatcg gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgccat gttggagtat gccgcttatg agaaacaatt acacgacact acagtgtcca 1920 atttgaaacg tatctggaat atggcgggtg gtgatgacaa gagaaattcc ctcgaaggta 1980 atctgaagtt cgtttttgat acgtatttta ctgttgaccc tatggtgaat attcactttt 2040 ctacgggtcg gtggatgcgt cctgtgcccg agggaattgt ttactctgtt ggatataatg 2100 aacgtggttt aggtccgaag tctgatggag agctttacat tgtcaatagt gagtgtgtga 2160 tatgtaatag cgagtcgtta tctactgtta cgcgctctct tcaagccccg actgggacta 2220 ttagtcaagt tgacggagtc gctggttgcg gtaaaactac ggcaattaaa tcaatttttg 2280 agccgtccac tgacatgatc gttaccgcga ataagaaatc cgcccaagat gtacgtatgg 2340 cacttttcaa atcttcagat tccaaagaag cctgcacttt cgttcgaaca gccgattccg 2400 tcctgcttaa tgattgtcca actgtgagta gggttttggt tgacgaggtc gtattgctac 2460 actttggtca attgtgtgcc gtcatgtcta aactgaaggc tgtgcgggct atatgttttg 2520 gggattcgga gcaaattgct ttttcttctc gagatgcctc gtttgacatg cgtttctcta 2580 agataattcc tgatgaaact agtgatgcgg acaccacatt ccgtagccca caagacgtcg 2640 tgccgcttgt gcgtttgatg gctacgaagg ccctcccgaa aggaactcat tcaaaatata 2700 cgaaatgggt ttctcaatct aaagtgaaga gatctgtcac atctcgttct attgctagtg 2760 tgacattggt cgacctagat tcttccaggt tttacatcac gatgactcaa gctgataagg 2820 cttcactgat ttcgagggcg aaagagatga acttaccaaa gactttctgg aatgaaagaa 2880 tcaaaaccgt gcatgaatct caaggcattt ctgaagatca tgttactttg gtaagattga 2940 agagcacaaa gtgtgacctg tttaagcagt tttcttattg tctcgttgcc ttgactagac 3000 acaaggtcac tttccgctac gagtattgtg gtatattgaa cggcgatttg atcgccgaat 3060 gtattgctcg tgcttagcgg tttccctcct tcgggcggga tctgagttgg cggtaatcta 3120 caaaccgtct gaagtcacta aacgattgtt tcggtgaacg ggttgtccat ccagcttacg 3180 gctaaaatgg tcagtcgtgg agaaaatcca cgccagcaga cttacaagtc tctgaggcgc 3240 ctttgaaacc atctcctagg tttcttcgga aggacttcgg tccgtgtacc tctagcacaa 3300 tgtgctagtg tcagggtacg ggtgcccccc ccacttctgt ggggggcctc ctaaaggaga 3360 cca 3363 //