ID KC527789; SV 1; linear; genomic RNA; STD; VRL; 3362 BP. XX AC KC527789; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP15 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3362 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3362 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; 21795ec9afe192fb089b6d2605c96bfa. XX FH Key Location/Qualifiers FH FT source 1..3362 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP15" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:R9UJU1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9UJU1" FT /protein_id="AGN56127.1" FT /translation="MATSSFNINELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GTIPELNCQWRKIRSAFSEAEDVTSLSGKIDSSGFTGVRKFKTLVAFDFINESTMSYVH FT DWKNIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGICPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRVLMSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSNVVHTLFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVDEGSDSPEEPSSTPDDTADVCGKEQEISELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDRRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGITYSVGYNERGLGPKSDGELYIVNSECVISNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSRIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDESRFYVTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3362 BP; 861 A; 733 C; 820 G; 948 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt tctaatcttt tctttgtaat tcctatggcg acgtcctcgt tcaacatcaa 120 tgaattggta gcctcccacg gcgataaagg actactcgcg aacgccctcg ttgataagac 180 agctcatgag cagctcgagg agcaattaca gcatcaacgt aggggccgta aggtctacat 240 tcggaacgtt ctgagtgtaa aggattctga agtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatcg ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacacaacg tacactgctg 480 ttccccttgt ttgggtatcc gcgacaagat gcgccacgcg gaacgtttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggatt tttgcactca 600 tccagctgct gattgcaaag tacaagccca ctttgctata tctattcatg gaggttatga 660 tatgggcttt agaggattat gtgaggcgat gaacgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggcg cgatgatgtt tgacgaccaa ggcacgatac ccgaacttaa 780 ttgccagtgg agaaaaatta ggagcgcatt ctctgaagct gaagacgtca catctttgtc 840 tggtaaaatt gattcctctg gattcaccgg tgtgcgtaag ttcaagactt tggttgcttt 900 tgattttatc aatgagtcta ccatgtcgta cgttcatgat tggaagaata taaaatcctt 960 tctaacggac cagacttact cgtataaagg gatgacttat ggcattgaac gatgtgtcat 1020 taatgcgggt atcatgacgt ataagataat cggtgtgcct gggatatgtc cgcccgaact 1080 cattcgacat tgtatttggt tcccctctat taaagattat gttggtttaa agattcccgc 1140 gtcgcaggac ttggttaagt ggaaaacagt gcgtgtttta atgtcaacat tacgtgaaac 1200 agaagagatt gctatgaggt gttacaacga taagaaagcg tggatggaac aattcaaggt 1260 tatcctgggt gttttgtctg cgaaatcatc tacaattgtt attaatggta tgtccatgca 1320 atctggtgag cgtatagata ttaacgatta ccattatatt ggtttcgcta ttcttctgca 1380 cacaaaaatg aaatatgaac aactgggaaa aatgtatgat atgtggaatg cttcgagcat 1440 atcgaagtgg tttgcagcgt tgactcgacc actgcgtgtg tttttctcca atgttgttca 1500 cacactgttc ccgactttga gaccccgcga ggaaaaagaa tttctgatca agctctccac 1560 cttcgtaact tttaatgaag agtgctcatt tgacggtgga gaggaatggg acgtgatatc 1620 atctgctgca tacgttgcta cacaggctgt tactgatggg aaagttttgg ctgcgcagaa 1680 agccgagaag ctcgctgaaa agcttgcaca acccgtagat gagggatcag acagccctga 1740 ggagccatct tcaactcctg atgatactgc cgatgtttgt ggaaaggagc aagaaatttc 1800 ggaacttgac tcattgtcgg ctcagacacg ttcccccatc actagagttg ctgaaagggc 1860 tactgccatg ctggagtacg ccgcttatga gaaacagcta cacgacacca cagtgtccaa 1920 tttgaaacgt atttggaata tggcgggcgg tgatgacagg agaaactccc tcgagggtaa 1980 tttgaagttt gttttcgaca cgtatttcac tgtcgacccc atggtgaata ttcatttttc 2040 cacgggtcgg tggatgcgtc ctgtgcctga ggggattact tattctgtcg gttataatga 2100 acgcggttta ggtccgaagt ctgatggaga gctttacatt gtcaatagtg agtgtgtgat 2160 cagtaacagc gagtctttgt ctgctgtcac gcgttctcta caagctccaa ctggaaccat 2220 tagtcaagtt gatggggtcg ctgggtgcgg gaaaaccacg gcaattaaat caatttttga 2280 gccgtccact gacatgatcg ttaccgcgaa caagaaatcc gcccaagatg tgcgtatggc 2340 acttttcaaa tcgtcggact ccaaagaagc ttgcaccttt gtccgaacag ccgactctgt 2400 tttgcttaat gaatgtccga ccgtgagtag agttttggtt gacgaggttg tgttgctgca 2460 ctttggtcaa ttatgtgccg tcatgtccaa attgaaggct gtgagagcca tatgtttcgg 2520 ggattcagag caaattgctt tttcctctcg agatgcctcg tttgacatgc gtttctctag 2580 gatcattcct gacgaaacta gtgatgcgga cactacattc cgtagtccac aagatgttgt 2640 gcctcttgtg cgtttgatgg ctacgaaggc ccttccgaaa ggaacccatt caaaatacac 2700 gaaatgggtt tctcaatcta aagtgaagag atctgtcaca tctcgggcta tcgcaagtgt 2760 gacgttggtt gatttagatg agtctagatt ttacgtcacg atgacacaag ctgataaggc 2820 ttcactgatt tcaagggcga aagagatgaa cttaccgaag actttctgga atgaaaggat 2880 taaaaccgtg catgagtctc aaggtatttc tgaagaccac gttactttgg taagattaaa 2940 gagcacaaaa tgtgacctat ttaaacagtt ttcatactgt cttgttgctt taactagaca 3000 caaggtcaca ttccgctacg agtactgcgg tgttttgaat ggcgatttaa tcgccgaatg 3060 tgttgctcgt gcttagcggc ttccctcctt cgggcgggat ctgagttggc ggtaatctac 3120 aaaccgtctg aagtcactaa acgattgttt cggtgaacgg gttgtccatc cagcttacgg 3180 ctaaaatggt cagtcgtgga gaaaatccac gccagcagac ttacaagtct ctgaggcgcc 3240 tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtacct ctagcacaat 3300 gtgctagtgt cagggtacgg gtgccccccc cacttctgtg gggggcctcc taaaggagac 3360 ca 3362 //