ID KC527786; SV 1; linear; genomic RNA; STD; VRL; 3360 BP. XX AC KC527786; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP12 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3360 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3360 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; 4b56ee68cd985b2dc66ed317afb09250. XX FH Key Location/Qualifiers FH FT source 1..3360 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP12" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:R9ULG6" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9ULG6" FT /protein_id="AGN56124.1" FT /translation="MATSSFSINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GTIPELNCQWRKIRSAFSEAEDVTSLSGKIDSSGFTGVRKFKTLVAFDFINESTMSYVH FT DWKNIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRILTSTLRETEEIAMRCYNDKKVWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYVGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVIEVSDRPEASSLTPDDPADVCGKEQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGKWMRPVPEGIVYSVGFNERGLGPKSDGELYIVNSECVICNSES FT LFNVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDEISDADTTFRSPQDVVPLVRLMATKALPRGTHSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDSSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3360 BP; 835 A; 729 C; 824 G; 972 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaatta ccctttgaaa 60 acctctcttt tctaatcttt tcttagtaat tcctatggcg acgtcctcgt tcagcatcaa 120 tgaattggta gcctcccacg gcgataaagg actactcgcg accgccctcg ttgataaaac 180 agctcatgag cagcttgagg agcaattaca acatcaacgt agaggccgta aggtctacat 240 tcggaacgtt ctgagtgtaa aggattccga agtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacataacg tacactgctg 480 ttccccttgt ttgggtatcc gcgataagat gcgccacgcg gaacgtttaa tgaacatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggatt tttgcactca 600 tccagctgct gattgcaaag tacaagccca ctttgctata tctattcacg gaggttatga 660 tatgggcttt agaggattat gtgaggcgat gaacgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggtg cgatgatgtt tgacgaccaa ggcacaatac ccgaacttaa 780 ttgccagtgg agaaaaatta ggagcgcatt ctctgaagct gaagacgtca catctttgtc 840 tggtaaaatt gattcctctg gattcaccgg cgtgcgtaaa ttcaagactt tggttgcttt 900 tgattttatc aatgagtcta ccatgtcgta cgttcatgat tggaagaata taaaatcctt 960 tctaacggac cagacttact cgtataaagg gatgacttat ggcattgaac gatgtgtcat 1020 taatgcgggt atcatgacgt ataagataat cggtgtgcct gggatgtgtc cacccgaact 1080 cattcgacat tgtatttggt tcccctctat taaagactat gttggtctaa agattcccgc 1140 gtcgcaggac ttggttaaat ggaagacagt gcgtatttta acgtcaacat tacgtgagac 1200 ggaagagatt gctatgaggt gctacaacga taagaaagta tggatggagc aatttaaggt 1260 tatcttaggt gttctatctg cgaaatcatc taccattgtt attaatggta tgtccatgca 1320 atctggcgag cgtattgata ttaacgatta tcactatgtt ggcttcgcta ttcttctcca 1380 cacaaaaatg aagtatgaac agttgggaaa aatgtatgat atgtggaatg cttcgagcat 1440 ttcgaagtgg tttgcagcgt tgactcgtcc gttgcgtgtg tttttctcca gcgttgttca 1500 cgcactgttt ccgactttga gaccgcgcga ggaaaaggaa ttcctgatta agctctccac 1560 ttttgtgact tttaatgaag agtgctcatt cgacggtgga gaggagtggg acgtgatatc 1620 atctgctgca ttcgttgcta cacaggctgt taccgatggg aaagttttgg ctgcgcagaa 1680 agccgagaag cttgctgaga agcttgcaca acccgtgatt gaggtatcgg acagacctga 1740 ggcgtcatct ctaacgcctg atgatccggc tgatgtttgt ggaaaagagc aagaggtttc 1800 ggaacttgac tctctatcag ctcagacacg ttcccccatc actagagttg ctgaaagggc 1860 tactgctatg ttagagtatg ccgcttatga gaaacagtta catgacacca cagtgtctaa 1920 tttgaaacgt atttggaaca tggcgggtgg tgatgacaag agaaactccc tcgagggtaa 1980 tctgaagttt gtctttgaca cgtattttac tgttgatccc atggtgaata ttcatttttc 2040 cacgggtaag tggatgcgtc ctgtgcctga gggaattgtt tactctgttg gttttaatga 2100 acgcggatta ggcccgaagt cagatgggga gctttacatt gtcaacagcg agtgcgtgat 2160 ttgcaacagt gagtctcttt ttaatgtcac tcgctctctt caagctccaa ctgggactat 2220 tagtcaagtc gacggagttg ctggttgtgg gaagaccacg gcaataaaat ccatttttga 2280 gccgtccact gacatgattg ttaccgcgaa caagaaatcc gcccaagacg ttcgtatggc 2340 actctttaaa tcgtcggatt ccaaagaagc ttgcaccttc gttcgtactg ccgattctgt 2400 cctacttaat gaatgtccga ctgtcagtag ggttttggtt gatgaagtcg tgttgcttca 2460 ctttggtcaa ttgtgtgctg tcatgtccaa gctgaaggcc gtgcgagcca tatgtttcgg 2520 ggattctgag cagattgctt tctcttctcg cgacgcttcg tttgacatgc gtttctcaaa 2580 gatcattcct gatgaaatca gtgatgcgga tactacgttc cgtagcccac aagatgtcgt 2640 gccgcttgtg cgtctaatgg ctacgaaggc tcttccgaga ggaactcact cgaaatacac 2700 taaatgggtt tctcaatcca aagtgaaaag gtctgttacg tctcgtgcca ttgccagtgt 2760 gacgctggtt gatttggatt cttctaggtt ttatatcacg atgactcagg ctgacaaggc 2820 ttcactgatt tcaagagcga aagagatgaa cttaccaaag actttctgga acgaaaggat 2880 taaaactgtg catgagtctc agggtatttc tgaagaccac gttactttgg tgagattgaa 2940 gagcacaaag tgtgacctgt tcaaacagtt ttcatattgt cttgttgcct tgacaagaca 3000 taaggtcact ttccgctacg agtattgtgg tgttttgaat ggtgatttaa tcgccgaatg 3060 tgttgctcgt gcttagcggt gtccctcctt cgggcgggat ctgagttggc ggtaatctac 3120 aaaccgtctg aagtcactaa acactttgtg gtgaacgggt tgtccatcca gcttacggct 3180 aaaatggtca gtcgtggaga aaatccacgc cagcagactt acaagtctct gaggcgcctt 3240 tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtacctct agcacaatgt 3300 gctagtgtca gggtacgggt gcccccccca cttctgtggg gggcctccta aaggagacca 3360 //