ID KC527783; SV 1; linear; genomic RNA; STD; VRL; 3360 BP. XX AC KC527783; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP9 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3360 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3360 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; f202df2e8b1674f2cacd2bc40042b824. XX FH Key Location/Qualifiers FH FT source 1..3360 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP9" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 95..3076 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:R9ULI2" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9ULI2" FT /protein_id="AGN56121.1" FT /translation="MATSSFNINELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMSMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GLIPELNCQWRKIRSAFSEAEDVTPLSGKIDSSGFTGVRKFKTLIAFDFINESTMSYVH FT DWKNIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVATQ FT AVTDGKILAAQKAEKLAEKLAQPVIEVSDSPEASSPTLDDTADVCGREQEVSELDSLSV FT QTRSPITRIAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKKNSLEGNLKFVFD FT TYFTVDPMVNVHFSTGRWMRPVPEGIAYSVGYNERGLGPKSDGELYIVNSECVISNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDESRFYVTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGALNGDLIAEC FT VARV" XX SQ Sequence 3360 BP; 827 A; 741 C; 840 G; 952 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaatta ccctttgaaa 60 acctctcttt tctaatcttt tctttgtaat tcctatggcg acgtcctcgt tcaacattaa 120 tgaactggta gcctcccacg gcgataaagg actactcgcg aacgccctcg ttgataagac 180 agctcatgag cagctcgagg agcaattaca gcatcaacgc agaggccgta aggtctacat 240 tcggaacgtt ctgagtgtaa aggattctga ggtcatccgg aatcggtatg gaggaaagta 300 cgacctccat cttacccagc aggagtttgc tccccacggc ctagctggtg ccctccgctt 360 gtgtgaaact ctcgattgtc tagactcttt cccttcatca ggtctgcggc aggacctcgt 420 cttagacttc ggaggaagtt gggtcacaca ttacctccgc ggacataacg tacactgttg 480 ttccccttgt ttgggtattc gcgataaaat gcgccacgcg gaacgtttaa tgagcatgcg 540 caagatcatc ttgaacgatc cacaacagtt cgatggtcga cagccggatt tttgcactca 600 tcccgctgct gattgcaaag tacaagccca ctttgctata tctattcatg gaggttatga 660 tatgggcttt agaggattat gtgaagcaat gaatgctcac ggaaccacta ttttgaaggg 720 aacgatgatg ttcgatggtg cgatgatgtt tgacgaccaa ggcttaatac ctgagcttaa 780 ttgtcagtgg aggaagatta ggagtgcttt ctccgaagct gaagacgtca cacctttgtc 840 tggtaaaatt gattcttcag gattcaccgg cgtgcgtaag ttcaagactt tgatagcttt 900 tgattttatc aacgagtcta ccatgtctta tgttcatgac tggaagaata taaaatcgtt 960 tctgacggac cagacgtact cgtataaagg gatgacttat ggcattgaac gttgtgtcat 1020 taatgcgggt atcatgacgt ataagattat cggtgtgcct gggatgtgcc cacccgaact 1080 cattcgacat tgtatttggt ttccctctat taaggactat gttggtctca agattcccgc 1140 gtcgcaggac ttggttaagt ggaaaacagt gcgcatttta acgtcaacat tgcgtgagac 1200 tgaagagatt gctatgaggt gttataatga taagaaggcg tggatggagc agtttaaggt 1260 tatcttaggt gttctctccg ctaaatcatc caccattgtt attaatggta tgtctatgca 1320 atctggcgaa cgaatcgata tcaacgatta tcattatatt ggattcgcca ttcttctcca 1380 cacaaaaatg aagtatgaac agttagggaa gatgtatgat atgtggaatg cttcgagtat 1440 ctcgaagtgg ttcgccgcgt tgactcgtcc gctgcgtgtg ttcttctcta gcgttgttca 1500 cgcactgttc ccgactttga gaccccgcga ggagaaagaa tttctgatta agctctccac 1560 ctttgtgact ttcaacgaag agtgctcgtt tgatggtgga gaggaatggg acgtgatatc 1620 atctgctgca ttcgttgcca cgcaggctgt taccgatggg aagattttgg ccgcgcagaa 1680 ggccgagaag ctcgctgaaa agcttgcgca acccgtgatt gaggtatcgg acagtcctga 1740 agcgtcatct ccaacgcttg atgatactgc tgatgtttgt ggaagggagc aagaagtttc 1800 ggagcttgac tccctgtcag ttcagacacg ttcccccatc actagaattg ctgaaagggc 1860 tactgctatg ttagagtatg ccgcttatga gaaacagctg catgacacca cggtgtccaa 1920 cctgaaacgc atttggaata tggcgggtgg tgatgacaag aaaaattccc tcgaaggcaa 1980 tttgaagttt gtctttgaca cgtattttac cgttgatcct atggtgaatg ttcatttctc 2040 cacaggtcgg tggatgcgtc ctgtgcctga agggattgct tattctgtcg gttataatga 2100 acgcggtcta ggtccgaaat ccgatgggga gctttacatt gttaatagtg agtgtgtgat 2160 cagtaacagc gagtctttgt ctgctgtcac acgctcgtta caagctccca ccggcaccat 2220 tagtcaagtt gatggggtcg ctgggtgcgg gaaaaccacg gcaattaaat caatttttga 2280 gccgtccacg gatatgatcg ttaccgctaa caagaaatcc gcccaagatg tgcgtatggc 2340 acttttcaaa tcgtcggact ccaaagaagc ttgcaccttt gtccgaacag ccgattctgt 2400 tttgcttaat gaatgtccga ccgtgagtag agttctggtt gatgaggtcg tgctactgca 2460 ctttggtcaa ttatgtgccg tcatgtctaa attgaaggct gtgagagcta tatgtttcgg 2520 ggattcagag cagattgctt tttcctctcg agatgcctcg tttgacatgc gtttctccaa 2580 gatcatccct gatgaaacta gtgacgcgga caccacgttc cgtagcccac aagatgtcgt 2640 gccgcttgtg cgtttgatgg ctacgaaggc ccttccgaaa ggaacccgct caaagtatac 2700 gaaatgggtt tctcaatcta aagtgaagag atctgtcaca tctcgggcta ttgcgagtgt 2760 gacgttggtt gatttagatg agtctagatt ttacgtcacg atgacacaag ccgataaagc 2820 ttcactgatt tcaagggcga aagagatgaa cttaccgaag actttctgga atgaaaggat 2880 taaaaccgtg catgagtctc aaggtatttc tgaggatcac gttactttgg taagattaaa 2940 gagcacaaag tgtgacctgt tcaagaaatt ttcttactgt cttgtcgctt taactaggca 3000 taaggtcacc ttccgctacg agtattgtgg tgcattgaac ggcgatttaa tcgccgagtg 3060 tgttgctcgt gtttagcggt gcccctcctt cgggcgggat ctgagttggc ggtaatctac 3120 aaaccgtctg aagtcactaa acgctttgcg gtgaacgggt tgtccatcca gcttacggct 3180 aaaatggtca gtcgtggaga aaatccacgc cagcagactt acaagtctct gaggcgcctt 3240 tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtacctct agcacaatgt 3300 gctagtgtca gggtacgggt gcccccccca cttctgtggg gggcctccta aaggagacca 3360 //