ID KC527778; SV 1; linear; genomic RNA; STD; VRL; 3361 BP. XX AC KC527778; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP4 segment RNA1, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3361 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3361 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; c548f504f8c54c29d195f6febe0cabbd. XX FH Key Location/Qualifiers FH FT source 1..3361 FT /organism="Cucumber mosaic virus" FT /segment="RNA1" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP4" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /product="1a protein" FT /db_xref="GOA:R9ULI2" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:R9ULI2" FT /protein_id="AGN56116.1" FT /translation="MATSSFNINELVASHGDKGLLANALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMSMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GLIPELNCQWRKIRSAFSEAEDVTPLSGKIDSSGFTGVRKFKTLIAFDFINESTMSYVH FT DWKNIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSSVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAFVATQ FT AVTDGKILAAQKAEKLAEKLAQPVIEVSDSPEASSPTLDDTADVCGREQEVSELDSLSV FT QTRSPITRIAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKKNSLEGNLKFVFD FT TYFTVDPMVNVHFSTGRWMRPVPEGIAYSVGYNERGLGPKSDGELYIVNSECVISNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRSKYTKW FT VSQSKVKRSVTSRAIASVTLVDLDESRFYVTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGALNGDLIAEC FT VARV" XX SQ Sequence 3361 BP; 830 A; 742 C; 838 G; 951 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaatta ccctttgaaa 60 acctctcttt tctaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatta 120 atgaactggt agcctcccac ggcgataaag gactactcgc gaacgccctc gttgataaga 180 cagctcatga gcagctcgag gagcaattac agcatcaacg cagaggccgt aaggtctaca 240 ttcggaacgt tctgagtgta aaggattctg aggtcatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcatc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacataac gtacactgtt 480 gttccccttg tttgggtatt cgcgataaaa tgcgccacgc ggaacgttta atgagcatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggat ttttgcactc 600 atcccgctgc tgattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggatta tgtgaagcaa tgaatgctca cggaaccact attttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgacca aggcttaata cctgagctta 780 attgtcagtg gaggaagatt aggagtgctt tctccgaagc tgaagacgtc acacctttgt 840 ctggtaaaat tgattcttca ggattcactg gcgtgcgtaa gttcaagact ttgatagctt 900 ttgattttat caacgagtct accatgtctt atgttcatga ctggaagaat ataaaatcgt 960 ttctgacgga ccagacgtac tcgtataaag ggatgactta tggcattgaa cgctgtgtca 1020 ttaatgcggg tatcatgacg tataagatta tcggtgtgcc tgggatgtgc ccacccgaac 1080 tcattcgaca ttgtatttgg tttccctcta ttaaggacta tgttggtctc aagattcccg 1140 cgtcgcagga cttggttaag tggaaaacag tgcgcatttt aacgtcaaca ttgcgtgaga 1200 ctgaagagat tgctatgagg tgttataatg ataagaaggc gtggatggag cagtttaagg 1260 ttatcttagg tgttctctcc gctaaatcat ccaccattgt tattaatggt atgtctatgc 1320 aatctggcga acgaatcgat atcaacgatt atcattatat tggattcgcc attcttctcc 1380 acacaaaaat gaagtatgaa cagttaggga agatgtatga tatgtggaat gcttcgagta 1440 tctcgaagtg gttcgccgcg ttgactcgtc cgctgcgtgt gttcttctct agcgttgttc 1500 acgcactgtt cccgactttg agaccccgcg aggagaaaga atttctgatt aagctctcca 1560 cctttgtgac tttcaacgaa gagtgctcgt ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc attcgttgcc acgcaggctg ttaccgatgg gaagattttg gccgcgcaga 1680 aggccgagaa gctcgctgaa aagcttgcgc aacccgtgat tgaggtatcg gacagtcctg 1740 aagcgtcatc tccaacgctt gatgatactg ctgatgtttg tggaagggag caagaagttt 1800 cggagcttga ctccctgtca gttcagacac gttcccccat cactagaatt gctgaaaggg 1860 ctactgctat gttagagtat gccgcttatg agaaacagtt gcatgacacc acggtgtcca 1920 acctgaaacg catttggaat atggcgggtg gtgatgacaa gaaaaattcc ctcgaaggca 1980 atttgaagtt tgtctttgac acgtatttta ccgttgatcc tatggtgaat gttcatttct 2040 ccacaggtcg gtggatgcgt cctgtgcctg aagggattgc ttattctgtc ggttataatg 2100 aacgcggtct aggtccgaaa tccgatgggg agctttacat tgttaatagt gagtgtgtga 2160 tcagtaacag cgagtctttg tctgctgtca cacgctcgtt acaagctccc accggcacca 2220 ttagtcaagt tgatggggtc gctgggtgcg ggaaaaccac ggcaattaaa tcaatttttg 2280 agccgtccac ggatatgatc gttaccgcta acaagaaatc cgcccaagat gtgcgtatgg 2340 cactttttaa atcgtcggac tccaaagaag cttgcacctt tgtccgaaca gccgactctg 2400 ttttgcttaa tgaatgtccg accgtgagta gagttctggt tgatgaggtc gtgctactgc 2460 actttggtca attatgtgcc gtcatgtcta aattgaaggc tgtgagagct atatgtttcg 2520 gggattcaga gcagattgcc ttttcctctc gagatgcctc gtttgacatg cgtttctcca 2580 agatcatccc tgatgaaact agtgatgcag acaccacgtt ccgtagccca caagatgtcg 2640 tgccgcttgt gcgtttgatg gctacgaagg cccttccgaa aggaacccgc tcaaagtaca 2700 cgaaatgggt ttctcaatcc aaagtgaaaa gatctgtcac atctcgggct attgcgagtg 2760 tgacgttggt tgatttagat gagtctagat tttacgtcac gatgacacaa gccgataaag 2820 cttcactgat ttcaagggcg aaagagatga acttaccgaa gactttctgg aatgaaagga 2880 ttaaaaccgt gcatgagtct caaggtattt ctgaggatca cgttactttg gtaagattaa 2940 agagcacaaa gtgtgacctg ttcaagaaat tttcttactg tcttgtcgct ttaactaggc 3000 ataaggtcac cttccgctac gagtattgtg gtgcattgaa cggcgattta atcgccgagt 3060 gtgttgctcg tgtttagcgg tgcccctcct tcgggcggga tctgagttgg cggtaatcta 3120 caaaccgtct gaagtcacta aacgctttgc ggtgaacggg ttgtccatcc agcttacggc 3180 taaaatggtc agtcgtggag aaaatccacg ccagcagact tacaagtctc tgaggcgcct 3240 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacctc tagcacaatg 3300 tgctagtgtc agggtacggg tgcccccccc acttctgtgg ggggcctcct aaaggagacc 3360 a 3361 //