ID   KC527774; SV 1; linear; genomic RNA; STD; VRL; 2220 BP.
XX
AC   KC527774;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP50 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2220
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2220
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; 75dbcaae7dda86c9bb077c656ca4f5bc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2220
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP50"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             122..961
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:R9UKU3"
FT                   /protein_id="AGN56111.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYVGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIEASQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFETFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9IW09"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IW09"
FT                   /protein_id="AGN56112.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LATGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2220 BP; 525 A; 520 C; 528 G; 647 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgcg tcgtgtcgtg tcgtgttgtc        60
     cgcacatttg agtcgtgctg tccgcacctc ttttctttca gtgtgttaga atacccgagg       120
     catggctttc caaggtacca gcaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgaacttcaa aagatattat ttagccctga agccattaag aaaatggctg ctgagtgtga       240
     cctaggccgg catcattgga tgcgagctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc cacggtcgca ttgtttcttt ctttaagtct gggtatgatg ctggtgaatt       360
     gtgctctaaa ggatatatga gcgtccctca agtgttgtgt gctgttactc gaacagtttc       420
     taccgatgct gaagggtcct tgagaattta cctagctgac ttaggcgaca aggaactatc       480
     tcccatagat aagcaatgtg tcacattaca taaccatgat ctccccgctt tagtgtcttt       540
     ccaaccgacg tatgattgtc ctatggagac agttgggaat cggaagcggt gttttgctgt       600
     cgttatcgag agacatggtt acgttgggta taccggcacc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact catatcgcag ctgggaagac       720
     tctagtactg ccattcaata gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     attgaagtcg caattgaata acatagaagc ttcgcaatac gttttgacgg attcgaagat       840
     caatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccgccgcaat       900
     cgggagttct tccgcgtccc gcttcgaaac cttcagaccg caggtggtta acggtcttta       960
     gattttcgtc gcgtattagt atataagtat gtgtgagtct gtacataata ctatatctat      1020
     agtgtcctgt gtgagttgat acagtagaca actgtgacgc gatgtcgtgt tgagaagaga      1080
     acacatctgg ttctagtaag ccacatcatt agttttgagg ttcaattcct cttactccct      1140
     gttgtgcccc ttactttttc atggatgctt ctccacgaaa ttgcgtttcg tctactagat      1200
     caaggagtgt ttgtgttgtg attttctctt tgtgttgtag atatttgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcggcg tcgtccgcgt cgtggttccc      1320
     gctccgcttc ctcctccgcg gatgctaact ttagagtctt gtcgcagcaa ctttcgcgac      1380
     ttaacaagac attagcaact ggtcgtccaa ctattaacca cccaaccttt gtgggtagtg      1440
     agcgttgtaa acctggatac acgttcacct cgattaccct gaagccacca aagatagaca      1500
     aaggatctta ctatggcaaa aggttgttac ttcctgattc agtcacagag ttcgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgcaaagtt cctgcctcat cggacttatc cgttaccgcc atctctgcta      1680
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgcagcatcc ggagtccaag      1740
     ccaacaataa attgttgtat gatctttcgg cgatgcgcgc tgatattggt gacatgagaa      1800
     agtacgccgt gctcgtgtat tcaaaagacg atgcgctcga gacggacgaa ttggtacttc      1860
     atgttgacat tgagcaccaa cgcattccca cgtctggggt gctcccagtt tgaacctgtg      1920
     ttttccagaa ccctccctcc gatttctgtg gcgggagctg agttggtagt gttgctataa      1980
     actacctgaa gtcactaaac gctatgcggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tccacgccag cagacttaca agtctctgag gtgcccttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaagatgct      2160
     agtttagagt acgggcatcc cccatttttt tttaaaaatg gggtctctca aaggagacca      2220
//