ID   KC527761; SV 1; linear; genomic RNA; STD; VRL; 2212 BP.
XX
AC   KC527761;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP34 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2212
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2212
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; 14cc091967b89d4816a8b49dc17cd5a0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2212
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP34"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             122..961
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:R9UKU3"
FT                   /protein_id="AGN56085.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYVGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIEASQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFETFRPQVVNGL"
FT   CDS             1256..1912
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9IW09"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IW09"
FT                   /protein_id="AGN56086.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LATGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2212 BP; 525 A; 520 C; 526 G; 641 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgcg tcgtgtcgtg tcgtgttgtc        60
     cgcacatttg agtcgtgctg tccgcacccc ttttctttca gtgtgttaga atacccgagg       120
     catggctttc caaggtacca gcaggacttt aactcaacag tcctcagcgg ctacgtctga       180
     cgaacttcaa aagatattat ttagccctga agccattaag aaaatggctg ctgagtgtga       240
     cctaggccgg catcattgga tgcgagctga taatgctatt tcagtccggc ccctcgttcc       300
     cgaagtaacc cacggtcgca ttgtttcttt ctttaagtct gggtatgatg ctggtgaatt       360
     gtgctctaaa ggatatatga gcgtccctca agtgttgtgt gctgttactc gaacagtttc       420
     taccgatgct gaagggtcct tgagaattta cctagctgac ttaggcgaca aggaactatc       480
     tcccatagat aagcaatgtg tcacattaca taaccatgat ctccccgctt tagtgtcttt       540
     ccaaccgacg tatgattgtc ctatggagac agttgggaat cgaaagcggt gttttgctgt       600
     cgttatcgag agacatggtt acgttgggta taccggcacc acagctagcg tgtgtagtaa       660
     ttggcaagca cggttttctt ctaagaataa caactacact catatcgcag ctgggaagac       720
     tctagtactg ccattcaata gattagctga gcaaacgaaa ccgtcagccg tcgctcgcct       780
     attgaagtcg caattgaata acatagaagc ttcgcaatac gttttgacgg attcgaagat       840
     taatcagaat gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccgccgcaat       900
     cgggagttct tccgcgtccc gcttcgaaac cttcagaccg caggtggtta acggtcttta       960
     gattttcgtc gcgtattagt atataagtat gtgtgagtct gtacataata ctatatctat      1020
     agtgtcctgt gtgagttgat acagtagaca actgtgacgc gatgtcgtgt tgagaagaga      1080
     acacatctgg ttctagtaag ccacatcatt agttttgagg ttcaattcct cttactccct      1140
     gttgtgcccc ttactttttc atggatgctt ctccacgaaa ttgcgtttcg tctactagat      1200
     caaggagtgt ttgtgttgtg atttctcttt gtgttgtaga tatttgagtc gagtcatgga      1260
     caaatctgaa tcaaccagtg ctggtcgtaa ccgtcggcgt cgtccgcgtc gtggttcccg      1320
     ctccgcttcc tcctccgcgg atgctaactt tagagtcttg tcgcagcaac tttcgcgact      1380
     taacaagaca ttagcaactg gtcgtccaac tattaaccac ccaacctttg tgggtagtga      1440
     gcgttgtaaa cctggataca cgttcacctc gattaccctg aagccaccaa agatagacaa      1500
     aggatcttac tatggcaaaa ggttgttact tcctgattca gtcacagagt tcgataagaa      1560
     gcttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt ctaccgtgtg      1620
     ggtgacagtc cgcaaagttc ctgcctcatc ggacttatcc gttaccgcca tctctgctat      1680
     gttcgcggac ggagcctcac cggtactggt ttatcagtat gcagcatccg gagtccaagc      1740
     caacaataaa ttgttgtatg atctttcggc gatgcgcgct gatattggtg acatgagaaa      1800
     gtacgccgtg ctcgtgtatt caaaagacga tgcgctcgag acggacgaat tggtacttca      1860
     tgttgacatt gagcaccaac gcattcccac atctggggtg ctcccagttt gaacctgtgt      1920
     tttccagaac cctccctccg atttctgtgg cgggagctga gttggtagtg ttgctataaa      1980
     ctacctgaag tcactaaacg ctatgcggtg aacgggttgt ccatccagct tacggctaaa      2040
     atggtcagtc gtggagaaat ccacgccagc agacttacaa gtctctgagg tgcccttgaa      2100
     accatctcct aggtttcttc ggaaggactt cggtccgtgt acttctagca caagatgcta      2160
     gtttagagta cgggcatccc ccattttaaa tggggtctct caaaggagac ca              2212
//