ID   KC527758; SV 1; linear; genomic RNA; STD; VRL; 2213 BP.
XX
AC   KC527758;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP30 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2213
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2213
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; 7b25172feea42b35bbbc7be11a9933d7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2213
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP30"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             119..958
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q787R2"
FT                   /protein_id="AGN56079.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1256..1912
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:O89125"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:O89125"
FT                   /protein_id="AGN56080.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2213 BP; 519 A; 523 C; 523 G; 648 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacatt ttgtttatct ttgtacagtg tgttagattt cccgaggcat       120
     ggctttccaa ggtaccagta ggactttaac tcaacagtcc tcagcggcta cgtctgacga       180
     tcttcagaag atattattta gccctgaagc cattaagaaa atggctactg agtgtgacct       240
     aggccggcat cattggatgc gcgctgataa tgctatttca gtccggcccc tcgttcccga       300
     agtaacccac ggtcgtattg cttccttctt taaatctgga tatgatgttg gtgaattatg       360
     ctcaaaagga tatatgagtg tccctcaagt gttatgtgct gttactcgaa cagtttctac       420
     tgatgctgaa gggtccttga gaatttactt agctgatcta ggtgacaagg agttatctcc       480
     tatagatgga caatgcgtct cgttacacaa ccatgatctc cccgctttgg tgtctttcca       540
     acctacgtac gactgtccta tggaaacagt tgggaatcgt aagcggtgtt ttgctgtcgt       600
     tatcgagaga catggttata ttgggtatac cggtaccaca gctagcgtgt gtagtaactg       660
     gcaagccagg ttttcttcta agaataacaa ctacactcat atcgcagctg ggaagactct       720
     agtactgcct ttcaacagat tagctgagca aacaaaaccg tcagctgtcg ctcgcctgtt       780
     gaagtcgcaa ttgaacaaca ttgaatcttc gcaatatctg ttaacgaacg cgaagattaa       840
     tcaaaatgcg cgcagtgagt ccgaggaatt aaatgttgag agccctcccg ccgcaatcgg       900
     gagttcttcc gcgtcccgct ccgaagcctt cagaccgcag gtggttaacg gtctttagca       960
     ctttggagcg tattagtata taagtatttg tgagtctgta cataatacta tatctatagt      1020
     gtcctgtgtg agttgaaaca gtagacatct gtgacgcgat gccgtgttga gaagggaaca      1080
     catctggttt tagtaagcct acatcacagt tttgaggttc aattcctctt actccctgtt      1140
     gagcccctta ctttctcatg gatgcttctc cgcgagattg cgttattgtc tactgactat      1200
     atagagagtg tgtgtgctgt attttctctt ttgtgtcgta gaattgagtc gagtcatgga      1260
     caaatctgaa tcaaccagtg ctggtcgtaa ccgtcgacgt cgtccgcgtc gtggttcccg      1320
     ctccgcctcc tcctcctcgg atgctaactt tagagtcttg tcgcagcagc tttcgcgact      1380
     taacaagacg ttagcagctg gtcgtccaac tattaaccac ccaacctttg tagggagtga      1440
     gcgctgtaaa cctggataca cgttcacatc tattacccta aaaccaccaa aaatagaccg      1500
     cgggtcttat tatggtaaaa ggttgttatt acctgattca gtcacggaat atgataagaa      1560
     acttgtttcg cgcattcaaa ttcgagttaa tcctttgccg aaatttgatt ctaccgtgtg      1620
     ggtgacagtc cgtaaagttc ctgcctcctc ggacttatcc gttgccgcca tctctgctat      1680
     gtttgcggac ggagcctcac cggtactggt ttatcagtat gctgcatctg gagtccaagc      1740
     taacaacaaa ttgttgtatg atctttcggc gatgcgcgct gatataggcg acatgagaaa      1800
     gtacgccgtc ctcgtgtatt caaaagacga tgcgctcgag acggacgagt tagtacttca      1860
     tgttgacgtc gagcaccaac gcattcccac gtctggggtg ctcccagtct gattccgtgt      1920
     tttccagaac cctccctccg atttctgtgg cgggagctga gttggcagtt ctgctataaa      1980
     ctgtctgaag tcactaaacg ttttacggtg aacgggttgt ccatccagct tacggctaaa      2040
     atggtcagtc gtggagaaat ccacgccagc agatttacaa atctctgagg cgcctttgaa      2100
     accatctcct aggtttcttc ggaaggactt cggtccgtgt acttctagca caacgtgcta      2160
     gtttcagggt acaggtgccc ccccactttc gtgggggcct ccaaaggaga cca             2213
//