ID   KC527754; SV 1; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   KC527754;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP26 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2214
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2214
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; 82e825826f8040a755e5e6e58253dedb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP26"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             120..959
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q787R2"
FT                   /protein_id="AGN56071.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q2L4T7"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q2L4T7"
FT                   /protein_id="AGN56072.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2214 BP; 515 A; 521 C; 527 G; 651 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgctg tccgcacatt ttgttttatc tttgtacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaaatctgg atatgatgtt ggtgaattgt       360
     gctcaaaagg atatatgagc gtccctcaag tgttatgtgc tgttactcgg acagtttcta       420
     ctgatgctga agggtccttg agaatttact tagctgatct aggtgacaag gagttatctc       480
     ctatagatgg acaatgcgtc tcgttacaca accatgatct ccccgctttg gtgtctttcc       540
     aacctacgta cgactgtcct atggaaacag ttgggaatcg taagcggtgt tttgctgtcg       600
     ttatcgagag acatggttat attgggtata ccggtaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcttct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca attgaacaac attgaatctt cgcaatatct gttaacgaat gcgaagatta       840
     atcaaaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gcaagtctgt gtataatact atatctatag      1020
     tgtcctgtgt gagttgaaac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcacag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt cgtggttccc      1320
     gctccgcccc ctcctcctcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaacaagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     agcgttgtaa acctggatac acgttcacat ctattaccct aaagccacca aaaatagacc      1500
     gcgggtctta ttatggtaaa aggttgttac tacctgattc agtcacggaa tatgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgtttgcgga cggagcctca ccggtactgg tttatcagta tgctgcatct ggagtccaag      1740
     ctaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ttagtacttc      1860
     atgttgacgt cgagcaccaa cgcattccca cgtctggggt gctcccagtc tgattccgtg      1920
     ttttccagaa tcctccctcc gatttctgtg gcgggagctg agttggcagt tctgctataa      1980
     actgtctgaa gtcactaaac gttttacggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tccacgccag cagatttaca aatctctgag gcgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaacgtgct      2160
     agtttcaggg tacaggtgcc cccccacttt cgtgggggcc tccaaaggag acca            2214
//