ID   KC527749; SV 1; linear; genomic RNA; STD; VRL; 2211 BP.
XX
AC   KC527749;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP20 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2211
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2211
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; aa87d61fa32a68a77abc81d38a476c52.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2211
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP20"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             109..948
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:R9UKY4"
FT                   /protein_id="AGN56061.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEATHGRIVSFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVVE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLVK
FT                   SQLNNIESSQYVLTNAKINQNARSESEELNVESPPVAIGSPSASRFEAFRPQVVNGL"
FT   CDS             1254..1910
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q7THU8"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q7THU8"
FT                   /protein_id="AGN56062.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSTDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYTASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVFSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2211 BP; 517 A; 517 C; 518 G; 659 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtgtgtcgcg tcgtgtcgag tcgtgctgtc        60
     cgcacattta tcacttttct ttgtttagtg tgttaagatt cccgaggcat ggctttccaa       120
     ggtaccagta ggactttaac tcaacagtcc tcagcggcta cgtctgacga acttcaaaag       180
     atattattta gccctgaagc cattaagaaa atggctactg agtgtgacct aggtcggcat       240
     cactggatgc gcgctgataa cgctatttca gtccggcccc tcgttcccga agcaacccat       300
     ggtcgtattg tatctttctt taagtctgga tatgatgttg gtgaattgtg ctcaaaagga       360
     tatatgagcg tccctcaagt gttatgtgct gttactcgaa cagtttccac tgatgctgaa       420
     ggatctttga gaatttacct agctgatcta ggcgacaagg agttatctcc tatagatggt       480
     caatgcgttt cattacataa ccatgatctt cccgctttag tgtctttcca accaacgtat       540
     gattgcccta tggagacagt tgggaaccgt aagcggtgtt ttgctgttgt cgttgaacga       600
     catggttata ttgggtatac cggcaccaca gctagcgtgt gtagtaattg gcaagcaagg       660
     ttttcttcta agaataacaa ctacactcat atcgctgctg ggaagactct agtactaccc       720
     ttcaacagat tagctgagca aactaaaccg tcagccgtcg ctcgccttgt gaagtcgcag       780
     ttgaataaca tagaatcctc gcaatacgtc ttgacgaatg cgaagattaa tcaaaatgcg       840
     cgtagtgagt ccgaggaatt aaatgttgaa agccctcccg tcgcaatagg gagtccttcc       900
     gcgtcccgct tcgaagcctt cagaccgcag gtggttaacg gtctttagcg cattcgttgc       960
     gtattagtat atattattat aagtctcata agtctgtcta taataatatt atctatagtg      1020
     tcctgtgtga gttgatacag tagacaactg tgacgcgatg ccgtgttgag aagggaacac      1080
     atctggtttt agtaagtcca catcatagtt ttgaggttca attcctctta ctccctgttg      1140
     ggccccttac tttctcatgg atgcttctcc gcgagattgc gtttcgtcta ctgtcctaag      1200
     agtattgtgt tgtttatttc tcttttgtgt tgtagattga gtcgagtcga gtcatggaca      1260
     aatctgaatc aaccagtgcc ggtcgtaacc gtcgacgtcg tccgcgtcgt ggttcccgct      1320
     ccgcttcctc ctccacggat gctaacttta gagtcctgtc gcagcaactt tcgcgactta      1380
     ataagacgtt agcagctggt cgtccaacta ttaaccaccc aacctttgtg ggtagtgaac      1440
     gctgtaaacc tgggtacacg ttcacatcta tcaccctgaa gccaccgaaa atagaccgtg      1500
     ggtcttatta tggtaaaagg ttgttgctac ctgattcagt cacggagttc gataagaagc      1560
     ttgtttcgcg cattcaaatt cgagtcaatc ctctgccgaa atttgattct accgtgtggg      1620
     tgacagtccg taaagttcct gcctcctcgg acctctccgt tgccgccatc tctgctatgt      1680
     ttgcggacgg agcctcaccg gtactggttt atcagtatac tgcatctgga gttcaagcta      1740
     acaacaaact gttgtatgat ctttcagcga tgcgtgctga tattggtgat atgagaaagt      1800
     acgccgtcct cgtgttttca aaagacgatg ctctcgagac ggatgaacta gtacttcatg      1860
     tcgacattga gcaccaacgc attcccacgt ctggggtgct cccagtttga atccgtgttt      1920
     cccagaaccc tccctccgat ttctgtggcg ggagctgagt tggcagtgtt actataaact      1980
     gtctgaagtc actaaacaca ttgtggtgaa cgggttgtcc atccagctta cggctaaaat      2040
     ggtcagtcgt ggagaaatcc acgccagtag acttacaagt ctctgaggca cctttgaaac      2100
     catctcctag gtttcttcgg aaggacttcg gtccgtgtac ttctaacaca aggtgttagt      2160
     ttagggtacg ggtgtccccc cactttcgtg ggggcctctt aaaggagacc a               2211
//