ID   KC527747; SV 1; linear; genomic RNA; STD; VRL; 2209 BP.
XX
AC   KC527747;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP18 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2209
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2209
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; 559b1c6fe4abce209cf76d8250f0101d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2209
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP18"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             120..959
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:R9UKU3"
FT                   /protein_id="AGN56057.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYVGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIEASQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFETFRPQVVNGL"
FT   CDS             1255..1911
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q539C1"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q539C1"
FT                   /protein_id="AGN56058.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LATGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGRRLVLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2209 BP; 514 A; 514 C; 534 G; 647 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgcg tcgtgtcgtg tcgtgttgtc        60
     cgcacatttg agtcgtgctg tccgcacctt ttctttcagt gtgttagaat acccgaggca       120
     tggctttcca aggtaccagc aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     aacttcaaaa gatattattt agccctgaag ccattaagaa aatggctgct gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgcatt gtttctttct ttaagtctgg gtatgatgct ggtgaattgt       360
     gctctaaagg atacatgagc gtccctcaag tgttgtgtgc tgttactcga acagtttcca       420
     ctgatgctga agggtctctg agaatttacc tagctgactt aggcgacaag gaattatctc       480
     ccatagataa gcaatgtgtc acattacata accatgatct ccccgcttta gtgtctttcc       540
     aaccgacgta tgattgtcct atggagacag ttgggaatcg gaagcggtgt tttgctgtcg       600
     ttattgagag acatggttac gttgggtata ccggcaccac agctagcgtg tgtagtaatt       660
     ggcaagcacg gttttcttct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc attcaataga ttagctgagc aaacgaaacc gtcggccgtc gctcgcctat       780
     tgaagtcgca attgaataac atagaagctt cgcaatacgt tttgacggat tcgaagatca       840
     atcagaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc ttcgaaacct tcagaccgca ggtggttaac ggtctttaga       960
     ttttcgtcgc gtattagtat ataagtatgt gtgagtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacaac tgtgacgcga tgtcgtgttg agaagggaac      1080
     acatctggtt ctagtaagcc acatcattag ttttgaggtt caattcctct tactccctgt      1140
     tgtgcccctt actttttcat ggatgcttct ccacgaaatt gcgtttcgtc tactagatca      1200
     aggagtgttt gtgttgtgat tttctctttg tgttgtagat atttgagtcg agtcatggac      1260
     aaatctgaat caaccagtgc tggtcgtaac cgtcggcgtc gtccgcgtcg tggttcccgc      1320
     tccgccccct cctccgcgga tgctaatttt agagtcttgt cgcagcaact ttcgcgactt      1380
     aacaagacgt tagcaactgg tcgtccaact attaaccacc caaccttcgt gggtagtgag      1440
     cgttgtaaac ctggatacac gttcacttcg attaccttga agccaccgaa aatagacaaa      1500
     gggtcttatt atggtagaag gttggttctt cctgattcag tcacagagtt cgataagaag      1560
     cttgtttcgc gcattcaaat tcgagttaat cctttgccga aatttgattc taccgtgtgg      1620
     gtgacagtcc gtaaagttcc tgcctcctcg gacttatccg ttaccgccat ctctgctatg      1680
     ttcgcggacg gggcctcacc ggtactggtt tatcagtatg cagcatctgg agtccaagcc      1740
     aacaataaat tgttgtatga tctttcggcg atgcgcgctg atattggtga catgagaaag      1800
     tacgccgtgc tcgtgtattc aaaagacgat gcgctcgaga cggacgaatt ggtacttcat      1860
     gtcgacattg agcaccaacg cattcctaca tctggggtgc tcccagtttg aacctgtgtt      1920
     ttccagaacc ctccctccga ttctgtggcg ggagctgagt tggtagtgtt gctataaact      1980
     acctgaagtc actaaacgct atgcggtgaa cgggttgtcc atccagctta cggctaaaat      2040
     ggtcagtcgt ggagaaatcc acgccagtag acttacaagt ctctgaggtg cctttgaaac      2100
     catctcctag gtttcttcgg aaggacttcg gtccgtgtac ttctagcaca agatgctagt      2160
     ttagagtacg ggcatccccc attttaatgg ggtctctcaa aggagacca                  2209
//