ID   KC527734; SV 1; linear; genomic RNA; STD; VRL; 2213 BP.
XX
AC   KC527734;
XX
DT   13-JUN-2013 (Rel. 117, Created)
DT   23-JUN-2016 (Rel. 129, Last updated, Version 3)
XX
DE   Cucumber mosaic virus isolate RP5 segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2213
RX   DOI; 10.1094/PHYTO-10-13-0275-R.
RX   PUBMED; 25116642.
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   "Molecular genetic analysis of cucumber mosaic virus populations infecting
RT   pepper suggests unique patterns of evolution in Korea";
RL   Phytopathology 104(9):993-1000(2014).
XX
RN   [2]
RP   1-2213
RA   Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.;
RT   ;
RL   Submitted (20-JAN-2013) to the INSDC.
RL   Crop Life Safety, Crop Protection Division, National Academy of
RL   Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707,
RL   Republic of Korea
XX
DR   MD5; b2c7f461efbe554f50da93a14146c915.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2213
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="Capsicum annuum L. (pepper)"
FT                   /isolate="RP5"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12305"
FT   CDS             123..962
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="3a; MP"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:R9UI00"
FT                   /protein_id="AGN56031.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDELQKILFSPEAIKKMAAECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRVVSFFKSGYDAGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDKQCVTLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYVGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIEASQYVLTDSKINQNARSESEELNVESPPAAIGSSSASRFETFRPQVVNGL"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9IW09"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IW09"
FT                   /protein_id="AGN56032.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LATGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2213 BP; 522 A; 518 C; 527 G; 646 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgcg tcgtgtcgtg tcgtgttgtc        60
     cgcacatttg agtcgtgctg tccgcacctc ttttcttttc agtgtgttag aatacccgag       120
     gcatggcttt ccaaggtacc agcaggactt taactcaaca gtcctcagcg gctacgtctg       180
     acgaacttca aaagatatta tttagccctg aagccattaa gaaaatggct gctgagtgtg       240
     acctaggccg gcatcattgg atgcgagctg ataatgctat ttcagtccgg cccctcgttc       300
     ccgaagtaac ccacggtcgc gttgtttctt tctttaagtc tgggtatgat gctggtgaat       360
     tgtgctctaa aggatatatg agcgtccctc aagtgttgtg tgctgttact cgaacagttt       420
     ctaccgatgc tgaagggtcc ttgagaattt acctagctga cttaggcgac aaggaactat       480
     ctcccataga taagcaatgt gtcacattac ataaccatga tctccccgct ttagtgtctt       540
     tccaaccgac gtatgattgt cctatggaga cagttgggaa tcggaagcgg tgttttgctg       600
     tcgttatcga gagacatggt tacgttgggt ataccggcac cacagctagc gtgtgtagta       660
     attggcaagc acggttttct tctaagaata acaactacac tcatatcgca gctgggaaga       720
     ctctagtact gcccttcaat agattagctg agcaaacgaa accgtcagcc gtcgctcgcc       780
     tattgaagtc gcaattgaat aacatagaag cttcgcaata cgttttgacg gattcgaaga       840
     tcaatcagaa tgcgcgcagt gagtccgagg aattaaatgt tgaaagccct cccgccgcaa       900
     tcgggagttc ttccgcgtcc cgcttcgaaa ccttcagacc gcaggtggtt aacggtcttt       960
     agattttcgt cgcgtattag tatataagta tgtgtgagtc tgtacataat actatatcta      1020
     tagtgtcctg tgtgagttga tacagtagac aactgtgacg cgatgtcgtg ttgagaagag      1080
     aacacatctg gttctagtaa gccacatcat tagttttgag gttcaattcc tcttactccc      1140
     tgttgtgccc cttacttttt catggatgct tctccacgaa attgcgtttc gtctactaga      1200
     tcaaggagtg tttgtgttgt gattttctct ttgtgttgta gatatttgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgctggtcgt aaccgtcgac gtcgtccgcg tcgtggttcc      1320
     cgctccgctt cctcctccgc ggatgctaac tttagagtct tgtcgcagca actttcgcga      1380
     cttaacaaga cattagcaac tggtcgtcca actattaacc acccaacctt tgtgggtagt      1440
     gagcgttgta aacctggata cacgttcacc tcgattaccc tgaagccacc aaagatagac      1500
     aaaggatctt actatggcaa aaggttgtta cttcctgatt cagtcacaga gttcgataag      1560
     aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttaccgc catctctgct      1680
     atgttcgcgg acggggcctc accggtactg gtttatcagt atgcagcatc tggagtccaa      1740
     gccaacaata aattgttgta tgatctttcg gcgatgcgcg ctgatattgg tgacatgaga      1800
     aagtacgccg tgctcgtgta ttcaaaagac gatgcgctcg agacggacga attggtactt      1860
     catgtcgaca ttgagcacca acgcattcct acatctgggg tgctcccagt ttgaacctgt      1920
     gttttccaga accctccctc cgattctgtg gcgggagctg agttggtagt gttgctataa      1980
     actacctgaa gtcactaaac gctatgcggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tccacgccag tagacttaca agtctctgag gtgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacttctagc acaagatgct      2160
     agtttagagt acgggcatcc cccattttaa atggggtctc tcaaaggaga cca             2213
//