ID KC527726; SV 1; linear; genomic RNA; STD; VRL; 3049 BP. XX AC KC527726; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP47 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3049 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3049 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; a510178f90f3518c9d5277198d140d71. XX FH Key Location/Qualifiers FH FT source 1..3049 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP47" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 86..2659 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:R9UHX9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:R9UHX9" FT /protein_id="AGN56015.1" FT /translation="MASPAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLVPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDAQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIATPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEETETKVSQTESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVMPPCERGGVTRA" FT CDS 2418..2750 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:R9UL39" FT /protein_id="AGN56016.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSCRHANVAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGAF" XX SQ Sequence 3049 BP; 774 A; 685 C; 703 G; 887 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaattc cctagacttt 60 aaaacttctt tctagtatct tttctatggc ttcccctgcc cctgcattct cactagccaa 120 tcttttgaac ggcagttacg gtgtcgacac tcccgaggat gtggaacgtt tgcgatctga 180 gcaacgcgaa gaggctgctg cggcctgtcg taattacagg cccctacccg ctgtggatgt 240 cagcgagagt gtcacagagg acgcgcattc cctccgaact cctgacggag ctcccgctga 300 agcggtgtct gatgagtttg taacttatgg tgctgaagat taccttgaaa aatctgatga 360 tgagctcctt gtcgcttttg agacgatggt caaacccatg cgtatcggac aactatggtg 420 ccctgcgttt aataaatgtt cttttatttc cagcattgct atggccagag ctttgttgtt 480 ggtacctaga acatcccacc gaaccatgaa gtgttttgaa gacctggtcg cggctattta 540 cactaaatct gatttctact acagtgaaga gtgtgaagct gacgacgctc agatagatat 600 ctcgtctcgc gatgtacccg gttattcttt cgaaccgtgg tcccgaacgt ctggattcga 660 accgccgccc atttgtgaag cgtgcgacat gatcatgtac cagtgcccgt gttttgattt 720 caatgcttta aagaaatcgt gcgctgagag gactttcgct gatgattatg ttattgaagg 780 tttagacggt gttgttgata atgcgactct gttgtcgaat ttgggtccat ttttagtacc 840 cgtgaagtgt caatatgaaa aatgtccaac accaaccatc gcgactcctc cggatttaaa 900 tcgtgctact gatcgtgttg atatcaattt agttcaatcc atttgtgact cgactctgcc 960 cactcatagt aattacgacg actcttttca tcaagtgttc gtcgaaagtg cagactattc 1020 tatagatctg gatcatgtaa gacttcgcca gtctgatctt atcgcaaaaa ttccagattc 1080 agggcatatg ataccggttc tgaacaccgg gagcggtcac aagagagtag gtacaacgaa 1140 ggaggtcctt acagcaatta agaaacgtaa tgctgacgtt ccagagctag gtgattccgt 1200 taatctgtct agattgagta aagctgtggc tgagagattc ttcatttcat acatcaatgg 1260 taactctcta gcatccagta actttgtcaa tgtcgttagt aatttccacg attacatgga 1320 aaagtggaag tcctcaggtc tttcttatga tgatcttccg gatcttcatg ctgagaattt 1380 gcagttttat gatcacatga taaaatccga tgtgaaacct gtggtgagcg acacactcaa 1440 tatcgacaga ccggttccag ctactataac gtatcataag aagagtataa cctcccagtt 1500 ctcaccgtta ttcacagcgc tattcgagcg cttccagaga tgccttcgag aacgtattat 1560 tcttcctgtt ggtaagattt catcccttga gatggcaggg tttgacgtca aaaacaaaca 1620 ctgcctcgag attgatctgt ctaagttcga taagtctcaa ggtgaatttc atttgctaat 1680 tcaggaacac attttgaatg gtctaggatg tccagctccg ataactaagt ggtggtgtga 1740 tttccaccgt ttttcttaca tcagagaccg tagagctggt gttggtatgc ctattagttt 1800 ccagagacga actggtgatg cattcactta ttttggcaat accattgtca ccatggctga 1860 gtttgcctgg tgttatgaca ccgaccaatt cgaaaagctt ttattctcag gcgatgattc 1920 tctaggattt tcactgcttc cccctgttgg tgatccgagt aaattcacaa ctcttttcaa 1980 catggaagct aaggtgatgg aacctgcagt accatatatt tgttcgaagt tcctactctc 2040 tgacgagttc ggtaacacat tttccgttcc agatccattg cgcgaggttc agcggttagg 2100 cacaaagaag attccctatt ctgacaatga tgaattcttg tttgctcact tcatgagctt 2160 tgttgatcga ttgaagtttt tggaccgaat gtctcagtcg tgtatcgatc aactttcgat 2220 tttcttcgaa ttgaaataca agaagtctgg ggaagaggct gctttaatgt taggcgcctt 2280 taagaagtac accgctaatt tccagtccta caaagaactc tattattcag atcgtcgtca 2340 gtgcgaattg atcaattcgt tttgtagtac agagttcagg gttgagcgtg taaattccaa 2400 taaacagcga aagaaatatg gaattgaacg taggtgcaat gacaaacgtc gaactccaac 2460 tggctcgtat ggtggaggcg aagaaacaga gacgaaggtc tcacaaacag aatcgacggg 2520 aacgaggtca caaaagtccc agcgagagag cgcgttcaaa tctcagactg ttccgcttcc 2580 taccgttcta tcaagtagat ggttcggaac tgacagggtc atgccgccat gcgaacgtgg 2640 cggagttacc cgagcctgag gcctctcgtt tagagttatc ggcggaagac catgattttg 2700 acgatacaga ttggttcgcc ggtaacgaat gggcggaagg tgctttctga aacctcccct 2760 tccgcatctc cctccggttt tctgtggcgg gagctgagtt ggcagtattg ctataaactg 2820 tctgaagtca ctaaacacat tgtggtgaac gggttgtcca tccagcttac ggctaaaatg 2880 gtcagtcgta gagaaatcta cgccagtaga cttacaagtc tctgaggcac ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tccgtgtact tctagcacaa cgtgctagtt 3000 tcagggtacg ggtgcccccc actttcgtgg ggcctccaaa aggagacca 3049 //