ID KC527722; SV 1; linear; genomic RNA; STD; VRL; 3047 BP. XX AC KC527722; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP42 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3047 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3047 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; efd315ab72c802a37f718362693ea1fc. XX FH Key Location/Qualifiers FH FT source 1..3047 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP42" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:R9UJG6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:R9UJG6" FT /protein_id="AGN56007.1" FT /translation="MAFPAPAFSLANLLNGTYGVDTPEEVERVRSEQHEEAAAACRNYK FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVELVTFGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLVPSTSNRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDIQINVSSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVATPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLATSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMSGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYFSDRRQC FT ELINSFSCVELRIERSSFIKQRKKKDGIERRRNDKRRTPTSPHGGGEETETKVSQEEST FT GTMLQKSQRESAFKSQTVPLPTVLSSRWFGTDRDVPPRERGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:B6V8E9" FT /protein_id="AGN56008.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKKNRRERCYKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYRHVNVAELSESEAPCFTLPAEDDHDFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3047 BP; 758 A; 681 C; 715 G; 893 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaattc cctagacttt 60 ctagtttctt tctttcctat ggctttccct gcccccgctt tctcattggc caatcttttg 120 aatggtactt acggtgtcga cactcccgag gaagtggaac gtgtgcgatc tgagcaacac 180 gaagaggctg ctgcggcttg tcgtaattac aagcctttac ccgctgtgga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga actccagacg gagctccctc tgaagaggtg 300 tctgttgagc tcgttacttt tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtatcg gacagttatg gtgccctgcg 420 tttaataaat gttcttttat ttccagcatt gctatggcta gagctttgct gttggtacct 480 agcacatcca accgaaccat gaagtgtttt gaagacctgg tcgcggctat ttacactaaa 540 tccgatttct attacgatga tgagtgtgaa gctgacgaca ttcagataaa tgtctcgtct 600 cgcgatgtac ccggttactc tttcgaaccg tggtcccgaa catctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ttttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgatgatt atgttattga aggtttagat 780 ggtgttgttg acaatgcaac tttgttgtct aatttaggcc catttttggt gcctgtgaag 840 tgccaatacg agaaatgtcc aacacccacc gtcgcgactc ctccgagttt aaatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg attccactct gcccacgcat 960 agcaactacg atgactcttt tcatcaagtg ttcgtcgaaa gcgctgatta ttctattgat 1020 ctggatcatg ttagacttcg gcaatctgat ctcattgcaa aaattccaga ttcagggcat 1080 atgataccgg ttttaaatac cgggagtggt cacaagagag taggtacgac gaaggaggtc 1140 cttacagcaa tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccaggttga gtaaggctgt ggctgagaga tttttcatct cgtacattaa tggcaactct 1260 ttagccacca gcaactttgt taacgtcgtt agcaatttcc acgattacat ggaaaaatgg 1320 aagtcttcag gcctctcgta tgacgatctt ccagatctgc atgctgagaa tttgcagttt 1380 tatgatcaca tgataaaatc tgatgtgaag cctgtcgtta gcgacacatt gaacattgac 1440 agaccggttc cagctactat aacgtatcac aagaaaggta taacctccca gttctcaccg 1500 ttattcacag ctctatttga gcgtttccag agatgccttc gagaacgtat tattcttcct 1560 gttggaaaga tttcatccct tgagatgtca ggatttgatg ttaagaacaa acattgtctc 1620 gagatcgatt tgtccaaatt cgacaagtct caaggtgaat tccatttgat gattcaggaa 1680 cacattttga atggtctagg gtgcccagct ccgataacta agtggtggtg tgatttccac 1740 agattctctt acattagaga ccgtagagct ggtgttggta tgcctatcag tttccagaga 1800 cgaactggtg atgcatttac ctacttcggt aacaccatcg tcaccatggc tgaatttgca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttcagtgc ttccccctgt tggcgatccg agtaagttca caactctttt caacatggaa 1980 gctaaggtga tggagccagc agtaccatac atttgttcga agtttctact ctctgatgag 2040 ttcggtaata ccttttccgt tccagatcca ttgcgcgagg ttcagcggtt aggaactaag 2100 aaaatcccct attccgacaa tgacgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgcatcg atcagctttc actcttcttt 2220 gagttgaaat acaggaagtc cggggcggag gctgccttga tgttaggcgc ctttaagaaa 2280 tataccgcta attttcagtc ctacaaagaa ctctattttt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagttg aggattgagc gttcgagttt cattaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactagc 2460 ccgcatggtg gaggcgaaga gacagagacg aaggtctcac aagaagaatc gacgggaacg 2520 atgttacaaa agtcccagcg agagagcgcg ttcaaatctc agactgttcc gcttcctacc 2580 gttctatcaa gtagatggtt cggaactgat agagatgtac cgccacgtga acgtggcgga 2640 attgtccgag tctgaggctc cttgttttac gttaccagcg gaagatgacc atgattttga 2700 cgatacagat tggttcgctg gtaacgagtg ggcggaaggt gcgttctgaa cccctccttc 2760 ctttctccct ccagttttct gaggcgggag ctgagttggc agtattgcta caaactgtct 2820 gaagtcacta aacgttttac ggtgaacggg ttgtccatcc agctaacggc taaaatggtc 2880 agtcgcggag aaatccacgc cggagactta caagtctctg aggcaccttt gaaaccatct 2940 cctaggtttc ttcggaagga cttcggtccg tgtacttcta gcacaagatg ctagtttagg 3000 gtacgggtgt ccccccccgc ttcggggggg cttcctgaag gagacca 3047 //