ID KC527721; SV 1; linear; genomic RNA; STD; VRL; 3050 BP. XX AC KC527721; XX DT 13-JUN-2013 (Rel. 117, Created) DT 23-JUN-2016 (Rel. 129, Last updated, Version 3) XX DE Cucumber mosaic virus isolate RP41 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3050 RX DOI; 10.1094/PHYTO-10-13-0275-R. RX PUBMED; 25116642. RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT "Molecular genetic analysis of cucumber mosaic virus populations infecting RT pepper suggests unique patterns of evolution in Korea"; RL Phytopathology 104(9):993-1000(2014). XX RN [2] RP 1-3050 RA Kim M.K., Seo J.K., Kwak H.R., Kim J.S., Kim K.H., Cha B.J., Choi H.S.; RT ; RL Submitted (20-JAN-2013) to the INSDC. RL Crop Life Safety, Crop Protection Division, National Academy of RL Agricultural Science, 150 Suin-Ro, Gwonseon-Gu, Suwon, Gyeonggi 441-707, RL Republic of Korea XX DR MD5; 831ecfeeeca47d35186d96d366de7113. XX FH Key Location/Qualifiers FH FT source 1..3050 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="Capsicum annuum L. (pepper)" FT /isolate="RP41" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="2007" FT /db_xref="taxon:12305" FT CDS 79..2655 FT /codon_start=1 FT /product="2a protein" FT /db_xref="GOA:R9UL47" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:R9UL47" FT /protein_id="AGN56005.1" FT /translation="MAFPAPAFSLANLLNGTYGVDTPEEVERVRSEQREEAAAACRNYK FT PLPAVDVSESVTEDAHSLRIPDGAPSEEVSVEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRVGQLWCPAFDKCLFISSIAMARALLMAPISSNRTMKCFEDLVAAIYTKSDFYYDDEC FT EADDVQISISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVANPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLAASN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMLGFDVKNKHCLEID FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSTLPPVGDPSKFTTLFNMEA FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMTQSCIDQLSLFFELKYRKSGAEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFSCVELRIERSSFIKQRKKKDGIERRRNDKRRTPTGPHGGGEETETKVSQEEST FT GTMSQKSQREGAFKSQTIPLPTVLSSRWFGTDRDVPPRERGGIVRV" FT CDS 2414..2749 FT /codon_start=1 FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:R9UJG1" FT /protein_id="AGN56006.1" FT /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKKNRRERCHKSPSERA FT RSNLRLFRFLPFYQVDGSELIEMYRHVNVVELSESEAPCFTLPAEDDHGFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3050 BP; 756 A; 666 C; 725 G; 903 T; 0 other; gtttatttac aagagcgtac ggttcaatcc ctgcctcccc tgtaaaactc cctagacttt 60 ctagtttctt tcttttctat ggctttccct gcccccgctt tctcattggc caatcttttg 120 aatggtactt acggtgtaga cactcccgag gaagtggaac gcgtgcgatc tgagcaacgc 180 gaagaggctg ctgcggcttg tcgtaattac aagcccctac ccgctgtgga tgtcagcgag 240 agtgtcacag aggatgcgca ttccctccga attccagacg gagctccctc tgaagaggtg 300 tctgttgaat ttgttactta tggtgctgaa gattaccttg aaaaatctga tgatgagctc 360 cttgtcgctt ttgagacgat ggtcaaaccc atgcgtgtcg gacagttatg gtgccctgcg 420 tttgataaat gtttatttat ttccagcata gctatggcta gagctttgct tatggcacct 480 atctcatcca accgaaccat gaagtgtttc gaagacctgg tcgcggctat ttacactaaa 540 tccgatttct attacgatga tgagtgtgaa gccgacgatg ttcagataag tatctcgtct 600 cgcgacgtac ccggttactc tttcgaaccg tggtcccgaa cgtctggatt tgaaccaccg 660 cctatctgtg aggcgtgtga catgatcatg taccagtgcc cgtgttttga ctttaatgct 720 ttaaagaaat cgtgcgctga gaggactttc gctgatgatt atgttattga aggtttagat 780 ggtgttgttg acaatgcaac tttgttgtct aatttaggcc catttttggt gcctgtgaaa 840 tgtcagtatg agaaatgtcc aacacccacc gtcgcgaatc ctccgagctt aaatcgtgct 900 actgatcgtg ttgatatcaa tttagttcaa tccatttgtg attccactct gcccacgcat 960 agtaattatg acgactcttt tcatcaggtg ttcgttgaaa gtgcagacta ttccattgat 1020 ctggatcatg tcagacttcg acaatccgat ctcattgcga agattccaga ttcagggcat 1080 atgataccgg ttttgaatac cgggagtggt cacaagagag taggtacaac gaaggaggtc 1140 cttacagcaa tcaagaaacg taatgctgac gttccagagc taggtgattc cgttaatctg 1200 tccaggttga gtaaggctgt ggctgagaga tttttcatct cgtacattaa tggtaactct 1260 ttagccgcca gcaactttgt taatgtcgtt agtaacttcc acgattacat ggaaaagtgg 1320 aagtcttcag gcctctcgta tgatgatctc ccggatcttc atgctgagaa tttgcagttt 1380 tacgatcaca tgataaaatc tgatgtgaag cctgtcgtta gcgatacatt gaacattgac 1440 agaccggttc cagctactat aacgtatcat aagaaaggta taacctccca gttctcaccg 1500 ttattcacag ctctgtttga gcgtttccag agatgccttc gagagcgtat tattcttcct 1560 gtcggaaaga tttcgtccct tgagatgtta ggatttgatg ttaagaacaa acattgtctc 1620 gagatcgact tgtccaaatt cgataagtct caaggtgaat ttcatttgat gattcaggaa 1680 cacattttga atggtctagg gtgcccggct ccgataacaa agtggtggtg tgatttccac 1740 cgattctctt acattagaga ccgtagagct ggtgttggta tgcctatcag tttccagaga 1800 cgaactggtg atgcatttac ttattttggt aataccattg tcaccatggc tgaatttgca 1860 tggtgttacg acaccgacca attcgaaaag cttttattct caggcgatga ttctctagga 1920 ttttctacgc ttccccctgt tggtgatccg agtaaattca cgactctttt caacatggaa 1980 gctaaggtga tggagccagc agtaccatat atttgttcga agttcttact ctctgacgag 2040 ttcggtaata ccttttccgt tccagatcca ttgcgcgagg ttcagcggtt gggaacaaag 2100 aaaatcccct attctgataa tgatgaattc ctgtttgctc acttcatgag ctttgttgat 2160 cgattgaagt ttttggaccg aatgactcag tcttgtatcg atcagctttc actcttcttt 2220 gagttgaaat acaggaagtc tggggcggag gctgccttaa tgctaggcgc ctttaagaaa 2280 tacaccgcta atttccagtc ctacaaagaa ctctattatt cagatcgtcg tcagtgcgaa 2340 ttgatcaatt cgtttagttg tgtagagttg aggattgagc gttcgagttt cattaagcag 2400 cgaaagaaga aagatggaat tgaacgaagg cgcaatgaca aacgtcgaac tccaactggc 2460 ccgcatggtg gaggcgaaga gacagagacg aaggtctcac aagaagaatc gacgggaacg 2520 atgtcacaaa agtcccagcg agagggcgcg ttcaaatctc agactattcc gcttcctacc 2580 gttctatcaa gtagatggtt cggaactgat agagatgtac cgccacgtga acgtggtgga 2640 attgtccgag tctgaggccc cttgttttac gttgccagcg gaagatgacc atggtttcga 2700 cgatacagat tggttcgctg gtaacgagtg ggcggaaggg gcattctgaa aacctccccc 2760 tttcctttct ccctccagtt ttctgaggcg ggagctgagt tggcagtatt gctacaaact 2820 gtctgaagtc actaaacgtt ttacggtgaa cgggttgtcc atccagctaa cggctaaaat 2880 ggtcagtcgt ggaaaaatcc acgccggaga cttacaagtc tctgaggtgc ctttgaaacc 2940 atctcctagg tttcttcgga aggacttcgg tctgtgtacc gctagtacaa ggtgctagct 3000 ttagggtacg ggcatccccc catttaatgg gggtttctta gaggagacca 3050 //